Aug 17, 2018 4:34 PM
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Database Query
SeedGenes Profile: XRI 1
Gene Information
Gene Symbol
XRI 1
Chromosome Locus
At5g48720
Alleles in Database
1
Identity Confidence
Confirmed
Alias Symbol
Gene Class
50% Defective Seeds
Predicted Function
MND1/AHP2 Complex
Function Details
DNA repair
Gene Evidence
Molecular Complementation
C. West (1 allele)
Border Recovery
West / GABI (1 allele)
Database Release
December, 2010
Predicted Sequences
Gene:
2841 nucleotides
mRNA:
1229 nucleotides
Protein:
300 amino acids
cDNA Status
EST Identified
Top BLAST Hits
Arabidopsis
:
Only self hit
Plant ESTs:
Brassica napus (83%)
Model Genomes:
None
Subcellular Localization
TargetP
Not Targeted to Cell Compartment
SUBA
mRNA Expression Data
NASCArray Spot History for
248668_at
Mutant Information
Allele Symbol
xri 1-1
Mutant Class
50% Defective Seeds
Source of Mutant
West / GABI
Mutant Line Number
GABI_075E02
Ecotype
Columbia
Genetic Background
ABRC Stock
Mutagen Treatment
T-DNA
Insertion Mutant
Yes
Details
Flanking Sequence
Location of Mutation
Exon 3
Terminal Phenotype
Preglobular
Nomarski Phenotype
Allelism Evidence
Reference Allele
Database Release
December, 2010
Seed Color
Embryo Color
Percent Mutant Seeds
Chi - Square
Seeds Counted
Percent Top Half
Chi - Square
Average Seed Length
Average Embryo Length