At1g80770 SYNGENTA 102326
Genomic Sequence (from TAIR)
gattggccacacaaagttttaactaaagcaagcctgacaagtaatcacccctaaaagacggaaacgacacacgtttttacgtaacacaaaaaatggttaa tctaaagcccaataaaaggcacattggttcacattaagaagaaggagcactgaaacaatgatttaagtatggtaatctagtggaccaccaataaaaagcc cattaattcataggcccaatattaacaacctgcgtttggaacaaactcacttcaactacaaaactcgaccctttgaaataagaagaagaaatctcggtga gtttttttgtggagattgaattttcttatctacctccactattcaatcgcatggcgtcagaggcccattagaaaagtcaagccaggggttttggattaga tcgttcgttcttcaatttaaaagttttcttctttcttgttcggaactcagaaacacgATGAAATTGGCCTCGAGCTTGGTTCCTCATCAATGGCGTCTCT TAACATCACCACAGCTTTCTCTACAAGCTTTCATTTTCTCCACAGgtacttactttgtctctgattttgtcatccatggtttcgttttacctctctctct ctcaatcttcttcagCCTCCACCACAAAGTCTCACACTTTCTGGTCTCCAAGCTTGCGTCAATGTCGGAATCTTCAGACGGCTCTTTCTCCAATCGTCAG TTCTAGCTACTTGCCCACTTCCTACATCACTCAGAAGCAGATTGAAATCCCTACCTCCCCTgtatatatattgaacccttgtttactccaaccttgggtt tccaactttgtgtttccattaagacaaaaacacgattttggatttggtttgcagGAAAAACAATCGCCACCAGTGCAGGAAGGTTTGGGTGCTTTTCAAA AACTGCCCATGGTCATGCCATCTATTGATTTGTATGCTTCTGCTCTCAGGAAGTCTAAAAGAGTCCAACCAACTAAAGgttatttgattctttatcttgt tgtctttgtttacacattaacttcttcaaactctttaactgagtctttgtccatttttggtctcagGCATTGCTAATATTGCTAAGCGAGAAAGAAATAG AGGTGCTAAACAGCTTGATGCATTCATGAAAgtaagttcattgcatccttcgctgtgttatggtttaaattctgaaacgttaattgtctttaccaaatca gaaattgtttttttgtgaaagGAACTGGCTCTACCTTTAAAAGGCTACATGGAAAGTTTTCCCAGGAAGAAACTCTTGCATCCATATGAAAGGTCTCTTA TTGACTTGACACTTGGTGATGGAAAGTATGAAGAGgtatctatttttaagtaattcagcatcttagcctgcaactgattttagcaaaggcttatagataa gtttttagGTGTTAGGAAAAGTTGATGTTCTGAGGAAGAAGGTGCAATCTGTTGGAAAGGAACATGCTTCTCTCTGCGCCAAGgtcagactcctcagttc cgtcaaaagcatattgtgtcttacattttagttaatcccatatactgtagattgtgattggtactacatcagtaaaggccttataagcttcataccgatc ccatttttttcatcttattctatcatatatcagtgtaggaaaagttaaacatctttcaatttcgttgcagGCTTTGTCAAAGAAGGAGGCAGAGGAACGC TTGAGCGAAGGTGTGGAGAAGCTGGAATTGGTTTTCCAACAACAAGGGGGAGCTGTTGATGATTTGCTAACTATAGCGAAGgttccttactagaatcttt tgtttgtctcttccagtgttatcagaattgtatgtatgaacagagttacgc◄actttgcagGTTT◄TGAGGGCTATGCCAGTT►GTTGACTTGGAAATGC CG►ACTCTTTGCCTTGTCGGAGCACCAAACGTTGGGAAGTCATCATTGGTTCGCATACTGTCAACAGGGAAGCCTGAGgtctgccttatgtaccaatctt tatatatgtgataataacttgcattgtctaatgcttatggttttttcggttgtcagATTTGCAATTATCCTTTCACAACCAGAGGAATTCTGATGGGTCA CATCGTTTTAAACTACCAACGATTTCAGgttgcgttgcttacttcgctgcgtctaatcactttcctcatgatatagattattgaatcatccagaaacgca ttgcagGTTACAGACACCCCTGGCCTTCTTAGGAGATGCGATGgtaaagtctagttgctacgaactctcatgtggatgaataactatatgatatttgatt aagtcttgattcttgtatttttttatttggtaattacagAGGATAGGAATAATCTAGAGAAGTTAACTCTTGCTGTACTCACTCATCTTCCAACCGCGGT TCTATATGTTCATGATCTAACGGGAGAATGTGGGACTTCTCCTTCTGATCAGgtatatagtaagaaacaaatccttatggatttcgttgcatcagatgtg tcaaaggaaagcacaagaatgtgcaccgttatctgatttgccgaataattgggtctgatatatcctgattcagttatatgtttgttgtgagggcattgca gTTTCAAATATATAAAGAGATGAAAGAGAGGTTTAAGGATTACCTGTGGATTGATGCTGTGTCCAAATGCGATCTGCTGGGAGGCTCACCGGTGATGTAT GCCAAAGAAGATAGAAGCAGTGATGACGCGGAAATCATTAAGTACCGGGAAAGAGGACCTGATGAATCAATTCATGTCTCGGTGAAAACAGAACAAGGTC TCAATGAGgtatgaaacttaccagaaatatttaatgtggaaagaaagcaagagtgtgttttgagtggtctgtttctctacatggctctgcagCTAAAGAA CAAAGTGAAGGAAGTACTGAGTAGTGAGATGGAGAAGATCCAAAGTGGAGAGAAAACTGATCAAAGTGTTGCTACTTGCTAGtgcttagctagagatttt ttgcccattttagcattttgacattaatgtctcatttgtttttaatatacttaaataggattaaaatcttaatgcattatatatacatagctatttctct cctcccttgttagtagtggatttggtacgcatatatatatatacatatataagttttagcaataatgcaggattagattgtttttaaaaaaagagaaaaa tgttgccaaaggaaaattgtgacgcacaaaaaaaggaacgatcctgaaattgtcagaagtagacagaaacaagaaaacttgtggagaacaataaaatatc ggattcagaacagagattaaaaaaaaatattaaaaaaatagaaatcgataagtaataataatattatctcttcttctctgcttccattttgggtatcgat aaac
Border_1 (102326_LB1D)
GCCTTTTCAGAAATGGATAAATAGCCTTGCTTCCTATTATATCTTCCCAAATTACCAATACATTACACTAGCATCTGAATTTCATAACCAATCTCGATAC
ACCAAATCGAATTCMATTCGGCGTTAATTCAGTACATTAAAAACGTCCGCAATGTGTTATTAAGTTGTCTAAGCGTCAATTTGTTTACACCACAATAAGC
GTAACTCTGTTCATACATACAATTCTGATAACACTGGAAGAGACAAACAAAAGATTCTAGTAAGGAACCTTCGCTATAGTTAGCAAATCATCAACAGCTC
CCCCTTGTTGTTGGAAAACCAATTCCAGCTTCTCCACACCTTCGCTCAAGCGTTCCTCTGCCTCCTTCTTTGACAAAGCCTGCAACGAAATTGAAAGATG
TTTAACTTTTCCTACACTGATATATGATAGAATAAGATGAAAAAAATGGGATCGGTATGAAGCTTATAAGGCCTTTACTGATGTAGTACCAATCACAATC
TACAGTATATGGGATTAACTAAAATGTAAGACACAATATGCTTTTGACGGAACTGAGGAGTCTGACCTTGGCGCAGAGAGAAGCATGTTCCTTTCCAACA
GATTGCACCTTCTTCCTCAGAACATCAACTTTTCCTAACACCTAAAAACTTATCTATAAGCCTTTGCTAAAATCAGTTGCAGGCTAAGATGCTGAATTAC
TTAAAAATAGATACCTCTTCATACTTTCCATCACCAAGTGTCAAGTCAATAAGAGACCTTTCATATGGATGC
| Start of BLAST Alignment: | NT 1407 / Exon 8 of 13 |
| First 15 bp Perfect Match: | NT 1394 / Intron 7 of 12 |
BLAST Details: Query Sequence: 102326_LB1D Length: (772 letters) Database: Genes from AGI, Total Genome (DNA); Smallest Sum High Probability Sequences producing High-scoring Segment Pairs: Score P(N) N At1g80770 68414.t08643 expressed protein 2875 1.4e-125 1 At2g19080 68415.t02113 metaxin-related contains 1 transme... 184 0.9996 1 >At1g80770 68414.t08643 expressed protein Length = 2715 Minus Strand HSPs: Score = 2875 (437.4 bits), Expect = 1.4e-125, P = 1.4e-125 Identities = 581/587 (98%), Positives = 581/587 (98%), Strand = Minus / Plus Query: 772 GCATCCATATGAAAGGTCTCTTATTGACTTGACACTTGGTGATGGAAAGTATGAAGAGGT 713 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 837 GCATCCATATGAAAGGTCTCTTATTGACTTGACACTTGGTGATGGAAAGTATGAAGAGGT 896 Query: 712 ATCTATTTTTAAGTAATTCAGCATCTTAGCCTGCAACTGATTTTAGCAAAGGCTTATAGA 653 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 897 ATCTATTTTTAAGTAATTCAGCATCTTAGCCTGCAACTGATTTTAGCAAAGGCTTATAGA 956 Query: 652 TAAGTTTTTAGGTGTTAGGAAAAGTTGATGTTCTGAGGAAGAAGGTGCAATCTGTTGGAA 593 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 957 TAAGTTTTTAGGTGTTAGGAAAAGTTGATGTTCTGAGGAAGAAGGTGCAATCTGTTGGAA 1016 Query: 592 AGGAACATGCTTCTCTCTGCGCCAAGGTCAGACTCCTCAGTTCCGTCAAAAGCATATTGT 533 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1017 AGGAACATGCTTCTCTCTGCGCCAAGGTCAGACTCCTCAGTTCCGTCAAAAGCATATTGT 1076 Query: 532 GTCTTACATTTTAGTTAATCCCATATACTGTAGATTGTGATTGGTACTACATCAGTAAAG 473 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1077 GTCTTACATTTTAGTTAATCCCATATACTGTAGATTGTGATTGGTACTACATCAGTAAAG 1136 Query: 472 GCCTTATAAGCTTCATACCGATCCCATTTTTTTCATCTTATTCTATCATATATCAGTGTA 413 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1137 GCCTTATAAGCTTCATACCGATCCCATTTTTTTCATCTTATTCTATCATATATCAGTGTA 1196 Query: 412 GGAAAAGTTAAACATCTTTCAATTTCGTTGCAGGCTTTGTCAAAGAAGGAGGCAGAGGAA 353 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1197 GGAAAAGTTAAACATCTTTCAATTTCGTTGCAGGCTTTGTCAAAGAAGGAGGCAGAGGAA 1256 Query: 352 CGCTTGAGCGAAGGTGTGGAGAAGCTGGAATTGGTTTTCCAACAACAAGGGGGAGCTGTT 293 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1257 CGCTTGAGCGAAGGTGTGGAGAAGCTGGAATTGGTTTTCCAACAACAAGGGGGAGCTGTT 1316 Query: 292 GATGATTTGCTAACTATAGCGAAGGTTCCTTACTAGAATCTTTTGTTTGTCTCTTCCAGT 233 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1317 GATGATTTGCTAACTATAGCGAAGGTTCCTTACTAGAATCTTTTGTTTGTCTCTTCCAGT 1376 Query: 232 GTTATCAGAATTGTATGTATGAACAGAGTTACGCTTATTGT-GGTGT 187 |||||||||||||||||||||||||||||||||| ||| ||| | Sbjct: 1377 GTTATCAGAATTGTATGTATGAACAGAGTTACGCACTTTGCAGGTTT 1423 >At2g19080 68415.t02113 metaxin-related contains 1 transmembrane domain; similar to Metaxin 1 (component of a preprotein import complex) (Swiss-Prot:P47802) [Mus musculus]; Length = 2208 Minus Strand HSPs: Score = 184 (33.7 bits), Expect = 7.8, P = 0.9996 Identities = 333/616 (54%), Positives = 334/616 (54%), Strand = Minus / Plus
Border_2 (102326_LB2U)
GCCTTTTCAGAAATGGATAAATAGCCTTGCTTCCTATTATATCTTCCCAAATTACCAATACATTACACTAGCATCTGAATTTCATAACCAATCTCGATAC
ACCAAATCGAATTCAATTCGGCGTTAATTCAGTACATTAAAAACGTCCGCAATGTGTTATTAAGTTGTCTAAGCGTCAATTTGTTTACACCACTCTTTGC
CTTGTCGGAGCACCAAACGTTGGGAAGTCATCATTGGTTCAGCATACTGTCAACAGGGAAGCCTGAGGTCTGCCTTATGTACCAATCTTTATATATGTGA
TAATAACTTGCATTGTCTAATGCTTATGGTTTTTTCGGTTGTCAGATTTGCAATTATCCTTTCACAACCAGAGGAATTCTGATGGGTCACATCGTTTTAA
ACTACCAACGATTTCAGGTTGCGTTGCTTACTTCGCTGCGTCTAATCACTTTCCTCATGATATAGATTATTGAATCATCCAGAAACGCATTGCAGGTTAC
AGACACCCCTGGCCTTCTTAGGAGATGCGATGGTAAAGTCTAGTTGCTACGAACTCTCATGTGGATGAATAACTATATGATATTTGATTAAGTCTTGATT
CTTGTATTTTTTTATTTGGTAATTACAGAGGATAGGAATAATCTAGAGAAGTTAACTCTTGCTGTACTCACTCATCTTCCAACCGCGGTTCTATATGTTC
ATGATCTAACGGGAGAATGTGGGACTTCTCCTTCTGATCAGGTATATAGTAAGAAACAAATCCTTATGGATTTCGTTGCATCAGATGTGTCAAAGGAAAG
CACAAGAATGTGCACCGTTATCTGATTTGCCGAATAATTGGGTCTGATATATCCTGATTCAGTTATATGTTTG
| Start of BLAST Alignment: | NT 1424 / Exon 8 of 13 |
| First 15 bp Perfect Match: | NT 1442 / Exon 8 of 13 |
BLAST Details: Query Sequence: 102326_LB2U Length: (873 letters) Database: Genes from AGI, Total Genome (DNA); Smallest Sum High Probability Sequences producing High-scoring Segment Pairs: Score P(N) N At1g80770 68414.t08643 expressed protein 3398 3.3e-149 1 At1g18270 68414.t02033 ketose-bisphosphate aldolase class... 186 0.9998 1 >At1g80770 68414.t08643 expressed protein Length = 2715 Plus Strand HSPs: Score = 3398 (515.9 bits), Expect = 3.3e-149, P = 3.3e-149 Identities = 690/700 (98%), Positives = 690/700 (98%), Strand = Plus / Plus Query: 175 GTCAATTTGTTTACACC-ACTCTTTGCCTTGTCGGAGCACCAAACGTTGGGAAGTCATCA 233 || | ||| | || |||||||||||||||||||||||||||||||||||||||||| Sbjct: 1441 GTTGACTTGGAAATGCCGACTCTTTGCCTTGTCGGAGCACCAAACGTTGGGAAGTCATCA 1500 Query: 234 TTGGTTCAGCATACTGTCAACAGGGAAGCCTGAGGTCTGCCTTATGTACCAATCTTTATA 293 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1501 TTGGTTC-GCATACTGTCAACAGGGAAGCCTGAGGTCTGCCTTATGTACCAATCTTTATA 1559 Query: 294 TATGTGATAATAACTTGCATTGTCTAATGCTTATGGTTTTTTCGGTTGTCAGATTTGCAA 353 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1560 TATGTGATAATAACTTGCATTGTCTAATGCTTATGGTTTTTTCGGTTGTCAGATTTGCAA 1619 Query: 354 TTATCCTTTCACAACCAGAGGAATTCTGATGGGTCACATCGTTTTAAACTACCAACGATT 413 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1620 TTATCCTTTCACAACCAGAGGAATTCTGATGGGTCACATCGTTTTAAACTACCAACGATT 1679 Query: 414 TCAGGTTGCGTTGCTTACTTCGCTGCGTCTAATCACTTTCCTCATGATATAGATTATTGA 473 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1680 TCAGGTTGCGTTGCTTACTTCGCTGCGTCTAATCACTTTCCTCATGATATAGATTATTGA 1739 Query: 474 ATCATCCAGAAACGCATTGCAGGTTACAGACACCCCTGGCCTTCTTAGGAGATGCGATGG 533 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1740 ATCATCCAGAAACGCATTGCAGGTTACAGACACCCCTGGCCTTCTTAGGAGATGCGATGG 1799 Query: 534 TAAAGTCTAGTTGCTACGAACTCTCATGTGGATGAATAACTATATGATATTTGATTAAGT 593 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1800 TAAAGTCTAGTTGCTACGAACTCTCATGTGGATGAATAACTATATGATATTTGATTAAGT 1859 Query: 594 CTTGATTCTTGTATTTTTTTATTTGGTAATTACAGAGGATAGGAATAATCTAGAGAAGTT 653 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1860 CTTGATTCTTGTATTTTTTTATTTGGTAATTACAGAGGATAGGAATAATCTAGAGAAGTT 1919 Query: 654 AACTCTTGCTGTACTCACTCATCTTCCAACCGCGGTTCTATATGTTCATGATCTAACGGG 713 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1920 AACTCTTGCTGTACTCACTCATCTTCCAACCGCGGTTCTATATGTTCATGATCTAACGGG 1979 Query: 714 AGAATGTGGGACTTCTCCTTCTGATCAGGTATATAGTAAGAAACAAATCCTTATGGATTT 773 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1980 AGAATGTGGGACTTCTCCTTCTGATCAGGTATATAGTAAGAAACAAATCCTTATGGATTT 2039 Query: 774 CGTTGCATCAGATGTGTCAAAGGAAAGCACAAGAATGTGCACCGTTATCTGATTTGCCGA 833 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2040 CGTTGCATCAGATGTGTCAAAGGAAAGCACAAGAATGTGCACCGTTATCTGATTTGCCGA 2099 Query: 834 ATAATTGGGTCTGATATATCCTGATTCAGTTATATGTTTG 873 |||||||||||||||||||||||||||||||||||||||| Sbjct: 2100 ATAATTGGGTCTGATATATCCTGATTCAGTTATATGTTTG 2139 >At1g18270 68414.t02033 ketose-bisphosphate aldolase class-II family protein low similarity to KbaY (tagatose-1,6-bisphosphate aldolase) [Escherichia coli] GI:8895753; contains Pfam profile PF01116: Fructose-bisphosphate aldolase class-II Length = 10,417 Plus Strand HSPs: Score = 186 (34.0 bits), Expect = 8.7, P = 0.9998 Identities = 96/144 (66%), Positives = 96/144 (66%), Strand = Plus / Plus