At3g61140 SYNGENTA 10431
Genomic Sequence (from TAIR)
cattatgatgttcatattcttttcttgtattggatcatattgtatatctttattttccaattgtaaatattcaaaataatatattttcttggaaaaaaat ctattgtggtttctctttttttatataagcaactatttaatggtaatatgacatataataataatttaaaaaattagatagtatttagattttagactat tagtggaaaattttacaaaataaataaatcccaactatgatagaaacccaaattgagtgaaaatagaagatgggctttaaatcggaccgacgcttattgc ttactaatacaaatcgcccttccttaaggtctgaagacgaaacgaagaacaaacactgaaacaaaagagaaaaatcccaaagctagaaaccctaatccca aacgaatcaATGGAGCGAGACGAAGAAGCGAGTGGACCGATGATGGAGATGTGCACTAACGGCGGCGAAGAGACGTCTAATCGAAGACCTATCATAAGTG GCGAACCGCTCGACATCGAGGCCTACGCGGCTCTCTACAAAGGTCGCACGAAGATCATGCGGCTTCTCTTCATCGCTAACCACTGCGGAGGAAACCACGC GCTTCAGTTTGACGCGTTGAGGATGGCTTACGATGAGATCAAAAAGGGTGAGAATACGCAGTTGTTCAGAGAAGTGGTCAATAAGATTGGCAACAGGCTT GGGGAAAAGTATGGGATGGATCTTGCTTGGTGTGAGGCCGTCGATCGT►CGTGCTGAACAGAAGAAAGTAAAGCTGGAGAATGAGCTCAGTTCTTATCGG gtaattacatttttgacctaattttcattatctctattccttgcttattgactctctactaggatttggtgatgctttttctcaagtaggttcttagaga atcaagtatgtagtgttgtttgtgttacttactgtgcgtatagctcgttacactggcttgcttgattctgtaattgcattaatgttgatttatctccttg atatgagtatacagccaaatctgctctattgactctttactgctgattttgatgatgttctttctcaattaattgcttaaagagtgaagtatgtggtgct gtttatgtgttgctcagtgtgtgcttagctcttttctagtttatcacttgcttgaataattgcatcattgttgatgcatcttcttggtatgagtatacga ccaaatctgatcaaggaaagcatcataattggctctcatggttagctgtataatgttaactctctgtttaataattaatttcttagagactgaagtatgt gctgttctttttgtgttgttcagcgtgtgcattatgcatagctctttcatggtaatagcttgcttgattcttaaattgcattaatgttgattcttcttct tgatatgtgtattgatatgtgtatacagACAAATTTGATCAAGGAAAGCATCAGAATGGGTTACAATGACTTTGGAGATTTCTATTACGCATGTGGTATG CTCGGAGATGCTTTCAAGAACTATATCCGAACACGCGACTACTGCACTACGACAAAGCACATCATTCACATGTGTATGAATGCGATTCTTGTCAGCATCG AAATGGGTCAGTTTACTCATGTTACAAGCTATGTGAACAAGGCAGAGCAGAATCCTGAAACCCTTGAACCTATGGTTAATGCAAAACTGCGATGTGCATC TGGATTGGCTCATTTGGAGTTGAAGAAGTACAAGCTAGCTGCTCGTAAGgtctgttgttttcccatatttgctcatgtgtttatggatcctattcatatc ctaactgaaatctaatcattgaacttgaatattgtcttgtgcagTTCTTAGATGTTAACCCAGAACTTGGAAATTCCTATAATGAAGTCATTGCTCCTCA AGATATTGCCACCTATGGTGGACTCTGTGCCCTGGCAAGCTTTGATCGATCAGAATTGAAGgcatgtatcctatttagcatttcttttaactctgccatt tttctccaacacttggtctataacttagtctaattttgcagCAAAAAGTCATTGACAATATCAACTTCCGGAATTTCTTGGAGCTAGTGCCTGATGTGAG GGAACTTATCAACGATTTCTATTCAAGgttgcatattcttaccaagactctcgtctatttcttgcatagcaccaaattactaaccttgaactaaggatta ttagtgtgaatacccactaagaccagatttacccaacgaagtccctcataattattatgtcccttgaatccactatttattctaatcactgactctgata aactgaagtagctgttgtgacgttagactctaatcctgtatcgattatgaaggcttccaatgttgccctccaaattcttatctatgttaacaatgcgtaa gacatgcaaactcgacccttttagactgtattctcgttgaatctaattattaagtttgcttgttgcagCCGCTATGCTTCCTGCCTGGAATATCTTGCAA GTCTCAAATCGAATCTGCTGCTGGACATCCATCTTCATGATCACGTTGACACACTATATGATCAGATAAGGAAGAAGGCACTGATCCAGTACACATTGCC ATTTGTCTCTGTTGATTTGAGCAGGATGGCCGATGCATTCAAGACTAGCGTCTCTGGTCTAGAGAAAGAACTTGAAGCCTTGATCACAGACAACCAGATT CAGgtccgtagtgtttcccgaaataactttgttttatgttactgtcattttaaaaaccttaatagaggcaaaatcttttttccatcccggacagGCAAGG ATTGATTCACACAACAAAATCCTCTATGCAAGACACGCGGATCAGAGGAATGCAACTTTCCAAAAGGTACTTCAGATGGGAAACGAATTCGATAGAGATG TCAGGGCGATGCTGTTAAGAGCCAACCTCCTGAAACATGAGTATCATGCCAGATCGGCAAGGAAACTTTGAtgacatctgctttgctaaactgagaggta atggcctattccaagatcataagatatctgttaaaatttaatttggtttagttactggttagctttctatctgaccttctctgttctctagttatcgctt tgttttgtcaacttttagtttaagattctttgaattatctatggactttgaatgaaatcccgagtgtgaatctatagacgcatgaatcacactgaaagtg aaatggtcaaagagtacagacataagtacacacacttggtttcatgggccgatatgatttatgatctttgtatgcatgtgggtggtgggatcaaaaatct catctcccaactaatatccatttcattttgtcaactaaacgtcgtatattatatgatagtttgtggctttgtgcacagttgtcactctatagttgaagac ttttttttttcttatctacaagaaataataatcaaaacggttaggtcttttttttataagtagaatctcgaaaattgcaaaaccaagatttgatgtcggc aaacgcatcatgtagactaagtgtgaacttttgattttcttgtgtcaaagaacttttgatattaatcactcgatagctacgtttcatcattattagtttc ttctatagaatttttatcactgaatgggatagttcacattatctggtactattatttttactattgcaagtagttcttttctatgcatttctttgaagtt gttctctttgtagtttgaggtatcttatatatatatatttctatatgtttgtgtttgccaggaatattcaagggtgttttttcaagattcgaaccaaacg agaaattgggcaagattacttttttgtaagaaccaagtgtttcaatgagtcgatgacatttagagtaagtaaaggttttattctaagatggacagtccat tattaatcaactattgaatgatattgccttttaaatgagtcttaggtagcatcgcaataactccatgtttactcaaaactcacaaaccatgaagttaaga atccgccaaatttggaagatgggccaactctaaatttactcaccccaatactccatttattttgggttgcattgatgaaagtaatttgtataattgatag gttgtgtatcaaaaaccggatctcattatttgtgatctttgcattagttatttttggagactaataaccatctttctaaactgtgagtaatacaaatata aacaacttcttgttcgctatggaaaataaaacataactctttaggtacgattcacgatgcaaaaacaatagtcatcgtgaataaacatgtccgaaataca tgaattaacaaatgaaacgctcaacaaatgaattgacaaatgaaacgctcaacaaacgaagaatctcacatcccatgatgaaattgggatttacaaataa aaagtagcacaagaagaagggggtagaacagtaattttaaaagaaagacagcgttgattcaccacttgaagtggacttttatagcaaaaagagttgagta acgtcaaaagagtcaaacccaacttttcaaaggttgtgtaaggctttccatgactccacatcttcttcttttccctttttatccttttctcttctctctc ttttattttttcttttgaagtaaattaatttcacgaaacaaatcagagaaccttttatatcttcctttttcgtcgttactatcgtcctttacctttttca t
Border_1 (10431_LBU)
CGTGCTGAACAGAAGAAAGTAAAGCTGGAGAATGAGCTCAGTTCTTATCGGGTAATTGCGTTTTTGACCTAATTTTCATTATCTCTATTCCTTGCTTATT
GACTCTCTACTAGGATTTGGTGATGCTTTTTCTCAAGTAGGTTCTTAGAGAATCAAGTATGTAGTGTTGTTTGTGTTACTTACTGTGCGTATAGCTCGTT
ACACTGGCTTGCTTGATTCTGTATTTGCATTAATGTTGATTTATCTCCTTGATATGAGTATACAGCCAAATCTGCTCTATTGACTCTTTACTGCTGATTT
TGATGATGTTCTTTCTCAATTAATTGCTTAAAGAGTGAAGTATGTGGTGCTGTTTATGTGTTGCTCAGTGTGTGCTTAGCTCTTTTCTAGTTAATCACTT
GCTTGAATAAT:GCATCATTGTTGATGCATCTTCTTGGTATGAGTATACGACCAAATCTGATCAAGGAAAGCATCATAATTGGCTCTCATGGTTAGCTGT
ATAATGTTAACTCTCTGTTTAATAATTAATTTCTTAGACACTGAAGTATGTGCTGTTCTTTTTGTGTTGTTCAGCGTGTGCATTATGCATAGCTCTTTCA
TGGTAATAGCTTGCTTGATTCTTAAATTGCATTAATGTTGATTCTTCTTCTTGATATGTGTATTGATATGTGTATACAGACAAATTTGATCAAGGAAAGC
ATCAGAATGGGTTACAATGACTTTGGAGATTTCTATTACGCATGTGGTATGCTCGGAGATGCTTTCAAGAACTATATCCGAACACGCGACTACTGCACTA
CGACAAAGCACATCATTCACATGTGTATGAATGCGATTCTTGTCAGCATCGAAATGGGTCAGTTTACTCATGTTACAAGCTATGTGAACAAGGCAGAGCA
GAATCCTGAAACCCTTGAACCTATGGTTAATGCAAAACTGCGATGTGCATCTGGATTGGCTCATTTGG
Start of BLAST Alignment: | NT 339 / Exon 1 of 6 |
First 15 bp Perfect Match: | NT 339 / Exon 1 of 6 |
BLAST Details: Query Sequence: 10431_LBU Length: (967 letters) Database: Genes from AGI, Total Genome (DNA); Smallest Sum High Probability Sequences producing High-scoring Segment Pairs: Score P(N) N At3g61140 68416.t06323 COP9 signalosome complex subunit 1... 4780 9.0e-212 1 At2g39920 68415.t04515 acid phosphatase class B family pr... 285 0.00017 1 At4g14910 68417.t02163 imidazoleglycerol-phosphate dehydr... 282 0.00027 1 At5g22220 68418.t02345 E2F transcription factor-1 (E2F1) ... 242 0.023 1 >At3g61140 68416.t06323 COP9 signalosome complex subunit 1 / CSN complex subunit 1 (CSN1) / COP11 protein (COP11) / FUSCA protein (FUS6) FUSCA6, COP11, CSN1; identical to FUS6 GI:432446, SP:P45432 from [Arabidopsis thaliana]; contains Pfam profile PF01399: PCI domain; identical to cDNA CSN complex subunit 1 (CSN1) GI:18056652 Length = 3835 Plus Strand HSPs: Score = 4780 (723.2 bits), Expect = 9.0e-212, P = 9.0e-212 Identities = 962/968 (99%), Positives = 962/968 (99%), Strand = Plus / Plus Query: 1 CGTGCTGAACAGAAGAAAGTAAAGCTGGAGAATGAGCTCAGTTCTTATCGGGTAATTGCG 60 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 392 CGTGCTGAACAGAAGAAAGTAAAGCTGGAGAATGAGCTCAGTTCTTATCGGGTAATTACA 451 Query: 61 TTTTTGACCTAATTTTCATTATCTCTATTCCTTGCTTATTGACTCTCTACTAGGATTTGG 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 452 TTTTTGACCTAATTTTCATTATCTCTATTCCTTGCTTATTGACTCTCTACTAGGATTTGG 511 Query: 121 TGATGCTTTTTCTCAAGTAGGTTCTTAGAGAATCAAGTATGTAGTGTTGTTTGTGTTACT 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 512 TGATGCTTTTTCTCAAGTAGGTTCTTAGAGAATCAAGTATGTAGTGTTGTTTGTGTTACT 571 Query: 181 TACTGTGCGTATAGCTCGTTACACTGGCTTGCTTGATTCTGTATTTGCATTAATGTTGAT 240 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 572 TACTGTGCGTATAGCTCGTTACACTGGCTTGCTTGATTCTGTAATTGCATTAATGTTGAT 631 Query: 241 TTATCTCCTTGATATGAGTATACAGCCAAATCTGCTCTATTGACTCTTTACTGCTGATTT 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 632 TTATCTCCTTGATATGAGTATACAGCCAAATCTGCTCTATTGACTCTTTACTGCTGATTT 691 Query: 301 TGATGATGTTCTTTCTCAATTAATTGCTTAAAGAGTGAAGTATGTGGTGCTGTTTATGTG 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 692 TGATGATGTTCTTTCTCAATTAATTGCTTAAAGAGTGAAGTATGTGGTGCTGTTTATGTG 751 Query: 361 TTGCTCAGTGTGTGCTTAGCTCTTTTCTAGTTAATCACTTGCTTGAATAAT-GCATCATT 419 |||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||| Sbjct: 752 TTGCTCAGTGTGTGCTTAGCTCTTTTCTAGTTTATCACTTGCTTGAATAATTGCATCATT 811 Query: 420 GTTGATGCATCTTCTTGGTATGAGTATACGACCAAATCTGATCAAGGAAAGCATCATAAT 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 812 GTTGATGCATCTTCTTGGTATGAGTATACGACCAAATCTGATCAAGGAAAGCATCATAAT 871 Query: 480 TGGCTCTCATGGTTAGCTGTATAATGTTAACTCTCTGTTTAATAATTAATTTCTTAGACA 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 872 TGGCTCTCATGGTTAGCTGTATAATGTTAACTCTCTGTTTAATAATTAATTTCTTAGAGA 931 Query: 540 CTGAAGTATGTGCTGTTCTTTTTGTGTTGTTCAGCGTGTGCATTATGCATAGCTCTTTCA 599 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 932 CTGAAGTATGTGCTGTTCTTTTTGTGTTGTTCAGCGTGTGCATTATGCATAGCTCTTTCA 991 Query: 600 TGGTAATAGCTTGCTTGATTCTTAAATTGCATTAATGTTGATTCTTCTTCTTGATATGTG 659 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 992 TGGTAATAGCTTGCTTGATTCTTAAATTGCATTAATGTTGATTCTTCTTCTTGATATGTG 1051 Query: 660 TATTGATATGTGTATACAGACAAATTTGATCAAGGAAAGCATCAGAATGGGTTACAATGA 719 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1052 TATTGATATGTGTATACAGACAAATTTGATCAAGGAAAGCATCAGAATGGGTTACAATGA 1111 Query: 720 CTTTGGAGATTTCTATTACGCATGTGGTATGCTCGGAGATGCTTTCAAGAACTATATCCG 779 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1112 CTTTGGAGATTTCTATTACGCATGTGGTATGCTCGGAGATGCTTTCAAGAACTATATCCG 1171 Query: 780 AACACGCGACTACTGCACTACGACAAAGCACATCATTCACATGTGTATGAATGCGATTCT 839 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1172 AACACGCGACTACTGCACTACGACAAAGCACATCATTCACATGTGTATGAATGCGATTCT 1231 Query: 840 TGTCAGCATCGAAATGGGTCAGTTTACTCATGTTACAAGCTATGTGAACAAGGCAGAGCA 899 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1232 TGTCAGCATCGAAATGGGTCAGTTTACTCATGTTACAAGCTATGTGAACAAGGCAGAGCA 1291 Query: 900 GAATCCTGAAACCCTTGAACCTATGGTTAATGCAAAACTGCGATGTGCATCTGGATTGGC 959 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1292 GAATCCTGAAACCCTTGAACCTATGGTTAATGCAAAACTGCGATGTGCATCTGGATTGGC 1351 Query: 960 TCATTTGG 967 |||||||| Sbjct: 1352 TCATTTGG 1359 >At2g39920 68415.t04515 acid phosphatase class B family protein weak similarity to pod storage protein [Phaseolus vulgaris GI:2627233 SP|P10743 STEM 31 kDa glycoprotein precursor (Vegetative storage protein B) {Glycine max}; contains Pfam profile PF03767: HAD superfamily (subfamily IIIB) phosphatase Length = 1515 Plus Strand HSPs: Score = 285 (48.8 bits), Expect = 0.00017, P = 0.00017 Identities = 517/918 (56%), Positives = 517/918 (56%), Strand = Plus / Plus