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At3g61140 SYNGENTA 10431

Genomic Sequence (from TAIR)
cattatgatgttcatattcttttcttgtattggatcatattgtatatctttattttccaattgtaaatattcaaaataatatattttcttggaaaaaaat
ctattgtggtttctctttttttatataagcaactatttaatggtaatatgacatataataataatttaaaaaattagatagtatttagattttagactat
tagtggaaaattttacaaaataaataaatcccaactatgatagaaacccaaattgagtgaaaatagaagatgggctttaaatcggaccgacgcttattgc
ttactaatacaaatcgcccttccttaaggtctgaagacgaaacgaagaacaaacactgaaacaaaagagaaaaatcccaaagctagaaaccctaatccca
aacgaatcaATGGAGCGAGACGAAGAAGCGAGTGGACCGATGATGGAGATGTGCACTAACGGCGGCGAAGAGACGTCTAATCGAAGACCTATCATAAGTG
GCGAACCGCTCGACATCGAGGCCTACGCGGCTCTCTACAAAGGTCGCACGAAGATCATGCGGCTTCTCTTCATCGCTAACCACTGCGGAGGAAACCACGC
GCTTCAGTTTGACGCGTTGAGGATGGCTTACGATGAGATCAAAAAGGGTGAGAATACGCAGTTGTTCAGAGAAGTGGTCAATAAGATTGGCAACAGGCTT
GGGGAAAAGTATGGGATGGATCTTGCTTGGTGTGAGGCCGTCGATCGTCGTGCTGAACAGAAGAAAGTAAAGCTGGAGAATGAGCTCAGTTCTTATCGG
gtaattacatttttgacctaattttcattatctctattccttgcttattgactctctactaggatttggtgatgctttttctcaagtaggttcttagaga
atcaagtatgtagtgttgtttgtgttacttactgtgcgtatagctcgttacactggcttgcttgattctgtaattgcattaatgttgatttatctccttg
atatgagtatacagccaaatctgctctattgactctttactgctgattttgatgatgttctttctcaattaattgcttaaagagtgaagtatgtggtgct
gtttatgtgttgctcagtgtgtgcttagctcttttctagtttatcacttgcttgaataattgcatcattgttgatgcatcttcttggtatgagtatacga
ccaaatctgatcaaggaaagcatcataattggctctcatggttagctgtataatgttaactctctgtttaataattaatttcttagagactgaagtatgt
gctgttctttttgtgttgttcagcgtgtgcattatgcatagctctttcatggtaatagcttgcttgattcttaaattgcattaatgttgattcttcttct
tgatatgtgtattgatatgtgtatacagACAAATTTGATCAAGGAAAGCATCAGAATGGGTTACAATGACTTTGGAGATTTCTATTACGCATGTGGTATG
CTCGGAGATGCTTTCAAGAACTATATCCGAACACGCGACTACTGCACTACGACAAAGCACATCATTCACATGTGTATGAATGCGATTCTTGTCAGCATCG
AAATGGGTCAGTTTACTCATGTTACAAGCTATGTGAACAAGGCAGAGCAGAATCCTGAAACCCTTGAACCTATGGTTAATGCAAAACTGCGATGTGCATC
TGGATTGGCTCATTTGGAGTTGAAGAAGTACAAGCTAGCTGCTCGTAAGgtctgttgttttcccatatttgctcatgtgtttatggatcctattcatatc
ctaactgaaatctaatcattgaacttgaatattgtcttgtgcagTTCTTAGATGTTAACCCAGAACTTGGAAATTCCTATAATGAAGTCATTGCTCCTCA
AGATATTGCCACCTATGGTGGACTCTGTGCCCTGGCAAGCTTTGATCGATCAGAATTGAAGgcatgtatcctatttagcatttcttttaactctgccatt
tttctccaacacttggtctataacttagtctaattttgcagCAAAAAGTCATTGACAATATCAACTTCCGGAATTTCTTGGAGCTAGTGCCTGATGTGAG
GGAACTTATCAACGATTTCTATTCAAGgttgcatattcttaccaagactctcgtctatttcttgcatagcaccaaattactaaccttgaactaaggatta
ttagtgtgaatacccactaagaccagatttacccaacgaagtccctcataattattatgtcccttgaatccactatttattctaatcactgactctgata
aactgaagtagctgttgtgacgttagactctaatcctgtatcgattatgaaggcttccaatgttgccctccaaattcttatctatgttaacaatgcgtaa
gacatgcaaactcgacccttttagactgtattctcgttgaatctaattattaagtttgcttgttgcagCCGCTATGCTTCCTGCCTGGAATATCTTGCAA
GTCTCAAATCGAATCTGCTGCTGGACATCCATCTTCATGATCACGTTGACACACTATATGATCAGATAAGGAAGAAGGCACTGATCCAGTACACATTGCC
ATTTGTCTCTGTTGATTTGAGCAGGATGGCCGATGCATTCAAGACTAGCGTCTCTGGTCTAGAGAAAGAACTTGAAGCCTTGATCACAGACAACCAGATT
CAGgtccgtagtgtttcccgaaataactttgttttatgttactgtcattttaaaaaccttaatagaggcaaaatcttttttccatcccggacagGCAAGG
ATTGATTCACACAACAAAATCCTCTATGCAAGACACGCGGATCAGAGGAATGCAACTTTCCAAAAGGTACTTCAGATGGGAAACGAATTCGATAGAGATG
TCAGGGCGATGCTGTTAAGAGCCAACCTCCTGAAACATGAGTATCATGCCAGATCGGCAAGGAAACTTTGAtgacatctgctttgctaaactgagaggta
atggcctattccaagatcataagatatctgttaaaatttaatttggtttagttactggttagctttctatctgaccttctctgttctctagttatcgctt
tgttttgtcaacttttagtttaagattctttgaattatctatggactttgaatgaaatcccgagtgtgaatctatagacgcatgaatcacactgaaagtg
aaatggtcaaagagtacagacataagtacacacacttggtttcatgggccgatatgatttatgatctttgtatgcatgtgggtggtgggatcaaaaatct
catctcccaactaatatccatttcattttgtcaactaaacgtcgtatattatatgatagtttgtggctttgtgcacagttgtcactctatagttgaagac
ttttttttttcttatctacaagaaataataatcaaaacggttaggtcttttttttataagtagaatctcgaaaattgcaaaaccaagatttgatgtcggc
aaacgcatcatgtagactaagtgtgaacttttgattttcttgtgtcaaagaacttttgatattaatcactcgatagctacgtttcatcattattagtttc
ttctatagaatttttatcactgaatgggatagttcacattatctggtactattatttttactattgcaagtagttcttttctatgcatttctttgaagtt
gttctctttgtagtttgaggtatcttatatatatatatttctatatgtttgtgtttgccaggaatattcaagggtgttttttcaagattcgaaccaaacg
agaaattgggcaagattacttttttgtaagaaccaagtgtttcaatgagtcgatgacatttagagtaagtaaaggttttattctaagatggacagtccat
tattaatcaactattgaatgatattgccttttaaatgagtcttaggtagcatcgcaataactccatgtttactcaaaactcacaaaccatgaagttaaga
atccgccaaatttggaagatgggccaactctaaatttactcaccccaatactccatttattttgggttgcattgatgaaagtaatttgtataattgatag
gttgtgtatcaaaaaccggatctcattatttgtgatctttgcattagttatttttggagactaataaccatctttctaaactgtgagtaatacaaatata
aacaacttcttgttcgctatggaaaataaaacataactctttaggtacgattcacgatgcaaaaacaatagtcatcgtgaataaacatgtccgaaataca
tgaattaacaaatgaaacgctcaacaaatgaattgacaaatgaaacgctcaacaaacgaagaatctcacatcccatgatgaaattgggatttacaaataa
aaagtagcacaagaagaagggggtagaacagtaattttaaaagaaagacagcgttgattcaccacttgaagtggacttttatagcaaaaagagttgagta
acgtcaaaagagtcaaacccaacttttcaaaggttgtgtaaggctttccatgactccacatcttcttcttttccctttttatccttttctcttctctctc
ttttattttttcttttgaagtaaattaatttcacgaaacaaatcagagaaccttttatatcttcctttttcgtcgttactatcgtcctttacctttttca
t

Border_1 (10431_LBU)

CGTGCTGAACAGAAGAAAGTAAAGCTGGAGAATGAGCTCAGTTCTTATCGGGTAATTGCGTTTTTGACCTAATTTTCATTATCTCTATTCCTTGCTTATT
GACTCTCTACTAGGATTTGGTGATGCTTTTTCTCAAGTAGGTTCTTAGAGAATCAAGTATGTAGTGTTGTTTGTGTTACTTACTGTGCGTATAGCTCGTT
ACACTGGCTTGCTTGATTCTGTATTTGCATTAATGTTGATTTATCTCCTTGATATGAGTATACAGCCAAATCTGCTCTATTGACTCTTTACTGCTGATTT
TGATGATGTTCTTTCTCAATTAATTGCTTAAAGAGTGAAGTATGTGGTGCTGTTTATGTGTTGCTCAGTGTGTGCTTAGCTCTTTTCTAGTTAATCACTT
GCTTGAATAAT:GCATCATTGTTGATGCATCTTCTTGGTATGAGTATACGACCAAATCTGATCAAGGAAAGCATCATAATTGGCTCTCATGGTTAGCTGT
ATAATGTTAACTCTCTGTTTAATAATTAATTTCTTAGACACTGAAGTATGTGCTGTTCTTTTTGTGTTGTTCAGCGTGTGCATTATGCATAGCTCTTTCA
TGGTAATAGCTTGCTTGATTCTTAAATTGCATTAATGTTGATTCTTCTTCTTGATATGTGTATTGATATGTGTATACAGACAAATTTGATCAAGGAAAGC
ATCAGAATGGGTTACAATGACTTTGGAGATTTCTATTACGCATGTGGTATGCTCGGAGATGCTTTCAAGAACTATATCCGAACACGCGACTACTGCACTA
CGACAAAGCACATCATTCACATGTGTATGAATGCGATTCTTGTCAGCATCGAAATGGGTCAGTTTACTCATGTTACAAGCTATGTGAACAAGGCAGAGCA
GAATCCTGAAACCCTTGAACCTATGGTTAATGCAAAACTGCGATGTGCATCTGGATTGGCTCATTTGG

Start of BLAST Alignment:NT 339 / Exon 1 of 6
First 15 bp Perfect Match:NT 339 / Exon 1 of 6
BLAST Details:
Query Sequence: 10431_LBU 
Length: (967 letters) 
Database: Genes from AGI, Total Genome (DNA);
                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

At3g61140 68416.t06323 COP9 signalosome complex subunit 1...  4780  9.0e-212  1
At2g39920 68415.t04515 acid phosphatase class B family pr...   285  0.00017   1
At4g14910 68417.t02163 imidazoleglycerol-phosphate dehydr...   282  0.00027   1
At5g22220 68418.t02345 E2F transcription factor-1 (E2F1) ...   242  0.023     1


>At3g61140 68416.t06323 COP9 signalosome complex subunit 1 / CSN complex
           subunit 1 (CSN1) / COP11 protein (COP11) / FUSCA protein (FUS6)
           FUSCA6, COP11, CSN1; identical to FUS6 GI:432446, SP:P45432 from
           [Arabidopsis thaliana]; contains Pfam profile PF01399: PCI domain;
           identical to cDNA CSN complex subunit 1 (CSN1) GI:18056652
        Length = 3835

  Plus Strand HSPs:

 Score = 4780 (723.2 bits), Expect = 9.0e-212, P = 9.0e-212
 Identities = 962/968 (99%), Positives = 962/968 (99%), Strand = Plus / Plus

Query:     1 CGTGCTGAACAGAAGAAAGTAAAGCTGGAGAATGAGCTCAGTTCTTATCGGGTAATTGCG 60
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | 
Sbjct:   392 CGTGCTGAACAGAAGAAAGTAAAGCTGGAGAATGAGCTCAGTTCTTATCGGGTAATTACA 451

Query:    61 TTTTTGACCTAATTTTCATTATCTCTATTCCTTGCTTATTGACTCTCTACTAGGATTTGG 120
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:   452 TTTTTGACCTAATTTTCATTATCTCTATTCCTTGCTTATTGACTCTCTACTAGGATTTGG 511

Query:   121 TGATGCTTTTTCTCAAGTAGGTTCTTAGAGAATCAAGTATGTAGTGTTGTTTGTGTTACT 180
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:   512 TGATGCTTTTTCTCAAGTAGGTTCTTAGAGAATCAAGTATGTAGTGTTGTTTGTGTTACT 571

Query:   181 TACTGTGCGTATAGCTCGTTACACTGGCTTGCTTGATTCTGTATTTGCATTAATGTTGAT 240
             ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct:   572 TACTGTGCGTATAGCTCGTTACACTGGCTTGCTTGATTCTGTAATTGCATTAATGTTGAT 631

Query:   241 TTATCTCCTTGATATGAGTATACAGCCAAATCTGCTCTATTGACTCTTTACTGCTGATTT 300
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:   632 TTATCTCCTTGATATGAGTATACAGCCAAATCTGCTCTATTGACTCTTTACTGCTGATTT 691

Query:   301 TGATGATGTTCTTTCTCAATTAATTGCTTAAAGAGTGAAGTATGTGGTGCTGTTTATGTG 360
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:   692 TGATGATGTTCTTTCTCAATTAATTGCTTAAAGAGTGAAGTATGTGGTGCTGTTTATGTG 751

Query:   361 TTGCTCAGTGTGTGCTTAGCTCTTTTCTAGTTAATCACTTGCTTGAATAAT-GCATCATT 419
             |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||
Sbjct:   752 TTGCTCAGTGTGTGCTTAGCTCTTTTCTAGTTTATCACTTGCTTGAATAATTGCATCATT 811

Query:   420 GTTGATGCATCTTCTTGGTATGAGTATACGACCAAATCTGATCAAGGAAAGCATCATAAT 479
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:   812 GTTGATGCATCTTCTTGGTATGAGTATACGACCAAATCTGATCAAGGAAAGCATCATAAT 871

Query:   480 TGGCTCTCATGGTTAGCTGTATAATGTTAACTCTCTGTTTAATAATTAATTTCTTAGACA 539
             |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct:   872 TGGCTCTCATGGTTAGCTGTATAATGTTAACTCTCTGTTTAATAATTAATTTCTTAGAGA 931

Query:   540 CTGAAGTATGTGCTGTTCTTTTTGTGTTGTTCAGCGTGTGCATTATGCATAGCTCTTTCA 599
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:   932 CTGAAGTATGTGCTGTTCTTTTTGTGTTGTTCAGCGTGTGCATTATGCATAGCTCTTTCA 991

Query:   600 TGGTAATAGCTTGCTTGATTCTTAAATTGCATTAATGTTGATTCTTCTTCTTGATATGTG 659
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:   992 TGGTAATAGCTTGCTTGATTCTTAAATTGCATTAATGTTGATTCTTCTTCTTGATATGTG 1051

Query:   660 TATTGATATGTGTATACAGACAAATTTGATCAAGGAAAGCATCAGAATGGGTTACAATGA 719
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:  1052 TATTGATATGTGTATACAGACAAATTTGATCAAGGAAAGCATCAGAATGGGTTACAATGA 1111

Query:   720 CTTTGGAGATTTCTATTACGCATGTGGTATGCTCGGAGATGCTTTCAAGAACTATATCCG 779
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:  1112 CTTTGGAGATTTCTATTACGCATGTGGTATGCTCGGAGATGCTTTCAAGAACTATATCCG 1171

Query:   780 AACACGCGACTACTGCACTACGACAAAGCACATCATTCACATGTGTATGAATGCGATTCT 839
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:  1172 AACACGCGACTACTGCACTACGACAAAGCACATCATTCACATGTGTATGAATGCGATTCT 1231

Query:   840 TGTCAGCATCGAAATGGGTCAGTTTACTCATGTTACAAGCTATGTGAACAAGGCAGAGCA 899
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:  1232 TGTCAGCATCGAAATGGGTCAGTTTACTCATGTTACAAGCTATGTGAACAAGGCAGAGCA 1291

Query:   900 GAATCCTGAAACCCTTGAACCTATGGTTAATGCAAAACTGCGATGTGCATCTGGATTGGC 959
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:  1292 GAATCCTGAAACCCTTGAACCTATGGTTAATGCAAAACTGCGATGTGCATCTGGATTGGC 1351

Query:   960 TCATTTGG 967
             ||||||||
Sbjct:  1352 TCATTTGG 1359


>At2g39920 68415.t04515 acid phosphatase class B family protein weak similarity
           to pod storage protein [Phaseolus vulgaris GI:2627233 SP|P10743 STEM
           31 kDa glycoprotein precursor (Vegetative storage protein B)
           {Glycine max}; contains Pfam profile PF03767: HAD superfamily
           (subfamily IIIB) phosphatase
        Length = 1515

  Plus Strand HSPs:

 Score = 285 (48.8 bits), Expect = 0.00017, P = 0.00017
 Identities = 517/918 (56%), Positives = 517/918 (56%), Strand = Plus / Plus