At1g79350 SYNGENTA 11206
Genomic Sequence (from TAIR)
tatgtttaaaaggtttaatttacaaataggcccatctatcagcccttttgtaacccttttaggcccaactaagtggtctcaaagttcacaaacccaaaac ttatgtggatttattattttaagcccacacaaactaacgaacggtgagctggcaagtcacgtgatgacacgtgatccatcaacccatcacttaccattac cccaaccggtacggaagtggttttgtatcttcctacttcgactcctcttgggtaattataattagttttagatgaaccaaacaatcccaaaataatatta gaaaaagggaagaaaatctgaaaccaaaaaaaacgagaagggagtcgaagaagaacctttcgcgctctgacgaaattcattacttacactggatttatac tttttttgtcttcctctctcaattatctccttcaacgccacaagatcctaaggcctctcacggatctctcttaagatcaatcgccgcggctcATGACGCA GTCGCCTGTTCAACCGCCTCCGCCGCTCCCAGCTCAGCCGCATTCCGCCGCCGGAGGTGTAATAAGAGGCGATGTACAGGTTAGGTGCGCAGGCTGTCGC GTGATTCTGAGGGTGAAAACCGGCGTTGTGGAGTTCTCGTGTCCGACTTGTCAACTTCCCCAAATGTTGCCGCCGGAGCTTCTTTCTAGGGCACGGCCGC AGTTTCCGCAGTCTCCACAACAACCACCACAGCCAATTCAGACGCTTCCGCCACCGATTCAACAGCAGCTTAAGCCTCTTAATCTACCTAGGCCTCCGGT TCCGGCACATGGAATCGATCCGACGAAGATGCAATTGCCTTGCGCTAACTGTCAGGCTATCCTCAATGTGCCTCATGGACTCACTCGGTTCTCGTGTCCT CAGTGCCATGTCGAGCTCGCTGTTGATGTCTCCAAGCTTAATCGGTCTTTAACTGCTTCTCAATCTCATTCTAATCCTCCTACTCCTGCTGCTCCCACAG TCCCGCCTCCGCCTCCTCCCGAAGAAGTCAATGAGGAAGCTATTGAAGTGGAGAGAGAAGAAGATGAAGGTGGAACGGCTGGAGAAACGTTTATGGATTA TgtgagtgcctcatcttgagatcatctttttctgtctgttcaatgtttttgatgatactaatttgtttctttgtgaagCGTCCCCCAAAACTTTCGATCG GACCTCCTCATCCTGATCCAATTGTGGAAACATCATCTCTATCTGCAGTGCAACCCCCAGAGCCTACTTATGATCTCAAAATCAAGGAAGAGCTTGAAAG GTCAAAGGCTTTATCGTGTTTGCAGATTGAGACATTAGTTTACGCTTGCCAGgttgcttttaaatggcaaaaagtttggttaatggcatttaaacgtatc ttctacctgtatgacaatggttttttttttattacagAGGCATCTCCAGCACCTTGCTGATGGTACCAGAGCAGGCTTTTTTGTTGGAGATGGTGCTGGT GTGGGCAAAGGGCGAACAATTGCCGGGTTGATTTGGGAAAATTGGAAACATGGAAGGAGGAAAGCTTTgtaagtcttgtagaaagatacttctgcgccat ttacatccttgataagatattgttagctcaattcaatctgacttatgattatactacatttgcataattgtgtctacggtgtccttttttggtttcttag ataacttaaagtaggatgagttctaatactatttgctccttttcctttatgatttacatagGTGGATTTCTATTGGCTCAGACTTGAAATATGATGCAAG AAGGGACTTGGATGATGTGGGTGCTACATGCGTTGGAGgtattatcttgattttggctgtaaattaagtttgtaattcgcttattttcttgggtcacaaa tgcttcatatgttatacataattacatatagcttatgctataaattattttctggctcattgttgaatagaaaattttgaaagtggatggtatagagtag actggatcagaatgagattctgactttgctgaatggataaattgactcatgctttaatattacgatgtagagtacacatgtatttttagagaacttattt tctttactgataaaggtaatgggtccctgaactttgtttatggtgtcttcatgcctagagaatgttatgggtagctgatgtttgtgcagttcatgaaaat ttcaggtaaataaaagttggactgtaactttagaatagtccaataggatatttgattcttagtctcattaatcctttataggtttgagcttggaatttta atagaatattaggagatggaaaaatacgacaaatcaagggaaccatgtcgatggataagttcattcaagtgaacaaatgtccagtttgttttttctgcaa ctaaataacaatatgtttgacgtgcagTGAATCCTTTGAACAAGCTACCCTATTCTAAGCTTGACTCGAAAAATGTTGGTATTAAAGAAGGAGTGGTATT CTTGACATACAATAGCCTCATTGCTTCCTCTGAGAAGGGCCGTTCTCGTTTACAGCAGCTTGTTCAATGGTGTGGACCAGAATTTGATGGTCTCTTGATC TTTGATGAGgtaacagttctatgaatgaagtatattaaattatttgcgttaaaatcatcatccccctttttttgtgaattgaacaatttgagtataccct gtcgttgtaagttgcttgatcactggttttatcaattttgggccaacctctaatctttagtacattgtgcaggtactaatttgttttccttttttatagT GCCATAAAGCGAAAAATTTGGTACCTGAAGCTGGGAGTCAGCCGACACGCATCGGACAGGCAGTTGTTGACATTCAGgtctggctacttgaaactgaatg ttcttatcagtgttgcttttaatattgctcttggctctgaagagtgagagattatatacttcgacttgtctttttgggttgtactttttctcggtttcag ataatatagtgtatattctagtttaacatgcttaatttgtggttagtgccatctagttgactctaactaatgaattctggaaaagcagGATAAGATCCCC CAAGCACGTGTTATTTATTGCTCGGCTACTGGGGCATCAGAACCACGAAACATGGGTTATATGGTCAGGCTTGGTCTTTGGGGAGCTGGAACAAGTTTTA GTGATTTTAACAAATTCCTAGgttggttttcttttctactcctgttgattaattgatttttttttttttgtgtgtgtgtgtaacatttggattagtacgt tctatcttatagttcgataaacatgaattcatttaagtgtcaggttttagcttctgtctagagcatatacaaaatatttcattaaatgaagtttgaccgc attcactgaattctaataattacttcgcttctcttactctaccttatgcattgcataacttggaatggaactttaacacaactttgtgcagGTGCCCTTG ATAAAGGTGGGACAGGAGCGTTGGAATTGGTTGCCATGGATATGAAAGCGAGgttttacaagccgtgtcatactatttagccatttgcattgctcataat tcattctaacaccccttctatgtaatagGGGGATGTATGTATGCCGAACCCTGAGTTACAAAGGGGCTGAGTTTGAGATTGTTGAAGCTCGTTTAGAAGC AGGAATGGAGgtaaatcatcttctatctaatattatgttgcttgattgcttctcatatcttaattgactatctagctctatataaatgtcgtgtaagctc aacaaagtagtatatatgaagagtagggggtctctgaggtagcttgaaccaagttcttacattaatttctgtctgctttattgggattagataattttca atggtgctttgatattttttggcaagcaagctcattatttcgagtgttcccctgtttatagtttagagatccctgtcgaaaaattaaaatcaggactttt gtgctgtattactcgctttcttctgtagGCAATGTACAATAAGTCTGCAGAATTTTGGGCAGAGCTACGGATAGAGTTGTTGTCAGCAAGTGCTTTTCTC CCTAACGAGAAACCAAATTCTAGTCAGTTGTGGAGATTATACTGGTCAAGCCACCAGgtataatcttaccacaggcaaaagttagacaatgttattactg ttgctgattggtcaatctatttcatgtctgttactgcagCGTTTCTTTAGACACCTGTGTATGTCAGCTAAAGTCCCTGTAACTGTGAGGTTAGCTAAGA AAGCCTTGTCAACAAACAAGTGTGTAGTTATTGGCCTTCAGAGTACTGGAGAGGCTCGAACCGAAGAGGCTGTAAATAAATATgtgtgtttctcttcata ctacttttggaaaaaatattaagtatccttttttgattccatctaactaatgtctacgtattgataatcttttcccccttttttcttggcatagGGTCTT GAGCTTGATGATTTTGTCTCGGGACCTCGAGAGCTCTTGTTGAAATTTGTGGAAGAGAATTATCCCTTACCCGAGCAGCCTGAACCTCTGTCAGgtaact tactctctgtaagaggttttgcttttaaatccctggtggtttttatttcatgttcatagtatgcctcttttgaacttttacagAGGATGATAGTGTTAAA GAACTTCAGAGGAAGAGGCATTCAGCTTCACCTGGTGTTTCAATTAGAGGGAGAGTAAGAAAGATGGCAAAGTGGAAACCAGATAGTGATAATGAAAGTG ATTTGGAGTCTGAAGGTGGGTTTCCTAGTGAAAACATGTATTCTGgtacatactgaacagacacaatattgatgcttaggctgtagtgaaaaataatatg ggaagttttgaatgtagttctttaagcgctggaaaacgtatctattgaactggaaatctacgtagcagctaataagcttattaatttatcccctatgtat tagtattactatatatctccaatattggaaattgcttaagggatgacattatcatgttttgggacaagtattatcctcagatctctagtctttgtatttg ccccatcttggtctgtttcttcaatcattcgaattttataacctcaaggtctgtacatttctaatcattagtgttttcaatgcagCTGACTCTGCTGACG ATTCTAATGATTCTGATGATGAGTTCCAGATATGTCAGATATGCAGTGGGGAAGATgtactttacttttaactctgatagcttgattaccgttgagggtt acgagattttaataacttgtctggtgatgaaactagGAAAGGAAGAAGTTGCTCCATTGTTCTGAATGTGACAAGCTTTTTCATCCGGACTGTGTGGTTC CTCCAGTTATAGACTTACCATCTGAAGCGTGGATTTGCTTTTCTTGTAAGGAAAAGACAGAGGAGTACATTCAAGCAAGACGTCTTTACATTGCCGAATT GCAGAAAAGgtctatacactgaaatagcaacttgtgtctggtacagaagcaaagtattagattctttttaagagtggttacccattttgtttctttttag GTATGAAGCAGCGCTTGAACGAAAATCAAAGATCATAGAGATCATCCGTTCTCTGAATCTTCCAAACAATCCTTTGGATGACATCGTCGATCAGgtaact atcatttacgtctctgttttttctcaggtatgaagcagctcatggttatacatgagtctcctttctttttagggtataacgctagtggtatctatgaatc atttattcaagttttggcatctagtatccaaaggctaattgtgtggttaaattaacttctgaaaactttagaatgtctctaaattgctgtgctttatatg tactaatgcagCTTGGAGGCCCTGAAAAAGTTGCAGAAATGACGGGCAGGCGAGGTATGCTTGTAAGAGCATCGAATGGGAAAGGTGTTACATATCAAGC AAGAAACACgtaagctttcattctcagtactttaacttattcagcactagtaatctgcttttcatccttgtgcttcttggctctagAAAGGATATTACCA TGGAAATGGTCAACATGCACGAGAAGCAACTATTTATGGATGGTAAAAAGTTGGTTGCCATTATTTCTGAAGCTGGGTCAGCTGGTGTTTCGTTGCAAGC AGATAGAAGGGCAGTAAATCAGgtgtgtcgagtttataaattctcctactaaataaaattgtcttttttttttgcgtattcttattgttctgtagatcta agttaattgtcagagatgacctcagaggacttcacatgtccgctttgggggtattagttgatttggaattttttatatatgtctgcagAAAAGAAGGGTT CACTTGACTTTAGAGCTTCCCTGGAGTGCTGATCGTGCAATTCAGCAATTTGGAAGAACTCACCGGTCAAATCAGACATCTGCACCTGAATATAGgttga atgacaacgcttgtgtttaattttgtatccgtccaatagcaaaagtatgctgttgaagttgatagttcttttgttttggtcctgtcagACTACTCTTCAC TAATCTCGGTGGGGAACGCCGCTTTGCCTCTATTGTTGCAAAGAGACTAGAAACACTTGGTGCTTTAACACAGGGAGACCGCAGGAAAGTCCCTTTCTTA ACTATTTCTTAgttagtcttttggcttgttattgcttaaaaccttgccatgtgttttgtctcaaaatttggtgtggtgtactgcagggctgggccctccg ggccttct►tt◄gagtgcgtataattatgatagTAA◄►CTTTGGTAAAAAATCCTTGATGGTGATGTATCGAGGCATAATGGAGCAGgtattcctcataa aagcctgtagtctcttaactccttaattttgcttcttcagtatttaggaacaatgataacggataaagtgtgaaatatagtatggcttaattgtcagGAG AAACTACCTGTTCTTCCTCCTGGATGCTCGATTGATGAACCCGAAACAGTTAAAGAGTTTTTGACCAAGGCAAGGGCTGCTCTTGTTGCGGTTGGAATTG TTAGGGACAGTGTTCTGGgtatgctttgctcgtaatttctctttttccgtacagaattcaaattctagttgtagtaatctcctttcttactttacttcat taatgatacagCCAATGGGAAAGATGTTGGAAGGTTTTCAGGACGTATTATTGATTCTGACATGCATGATGTTGGACGATTTTTGAATCGCCTCTTAGGA TTGCCACCTGATATCCAGAATAGgtattatgcgtcaattggaaatttgctctatgtaacttaccttccattttaaaagcaacttccgtttgtattaatgc tttctattcttgtgctgtacagGCTGTTTGAATTGTTTACTAGTATATTAGACGTTCTTGTACATAATGCTCGGATAGAAGGAAGTTTTGACTCAGGAAT TGTGGATATGAAAGCTAATAGTGTTGAGCTACTGAGCACTCCAAAGgttgatgatatgtcttacttaattattggttcttggtgtatttttgctactaat atttgaatttttcagACCGTCCATGTTGATCAAATGTCTGGTGCCTCAACTATGCTCTTTACTTTTACTCTAGATCGTGGTGTAACATGGGAGgtacttc aatatctttcactcttggtaaacttagtcgtatttcactgcactcaaaagcttgatttgatctgtgttccagTCTGCGAGTTCAATGCTAGAGGGAAAGA GAAGGGACGGGCTTGGTTCAGCTAATGATGGCTTTTTTGAATCTAAAAGGGAATGGTTAGGAAGACGGCACTTCATATTAGCATTTGAGAGgtaaatcat tatcctcactactctttggataatgtggtccttttatacaaacaaatattagaatactaataacactatcaaaatctcattgctgactttgtcttggatt tccagTGCCGCTTCTGGGTTGTTTAAGATTGTACGTCCTGCTGTAGGAGAGTCGATCAGgtatctactacaccattggcagaacctttacatttcgtatt tctgactagaaaaagtggtcttaactattgtttattttttccagGGAGATGTCTCTTTCAGAGTTGAAAACTAAATACCGAAAACTATCTTCTCTGGAGA AGGCTCGTACTGGTTGGGAGGACGAGTACGAAGTTTCATCAAAACAGgtatgcttcccctatcaaaaataaagttgagaatacatagaaccaaagcagaa aaatagattagcacagaatcatcgtggcgtaatatagtttaagcctcacaagagattcataagtcataaccattgatatagcgctgttcattaaatgagt ttccatctgagtacagTGTATGCATGGACCCAAGTGTAAGCTTGGGGAGTATTGCACGGTTGGACGTAGGATACAGGAAGTAAACGTTGTGGGTGGCCTT ATTCTTCCCATCTGGGGAACCATCGAGAAAGCTCTCTCCAAACAAgtaacaaagaccattcaagaatttgtgagactctctcttagtgtgttggcatgga aacttatatgtatttggatcttttgcagGCCCGTCACAGCCACAAGAGAATTCGAGTTATACGCATAGAGACTACGACGGATAATCAGCGGATAGTGGGC CTCTCCATCCCAAATGCAGCTGTAGAAACTGTTTTACAAGgtattgcgagcttatctcatgatcttgagacatcatatgataaatccgacaaggaaacag aatggttatctcgacagtcgttgatttgtgtctgtctttttgtttctgcagATTTAGCATGGGTTCAAGAGATTGATGATTAAgacaacgagtatttata agaagcatacaccctcaaagctccacaatcaagttcccatgcctattttgtattttctttatttaagaaaaagaggaaaaagacacttgactttcatttt tgtgtatatcacatgacaaattggcaagatgatacatagatgtaatattatttatctaacaagattcattcttatgttccgttaaaaaaaactttttctt attgatgtgcagaatacagagagttaacaagaaaagaaaaacaaaaaataatttcacaaccaacataatagatctcaataaaacaagaagaattttagtg tttcacagaacacaacacacataacttgtaaattacataaatgccatcaaacagcaaaaaaaaaaaacaggcttatttttccgaccagaaacttcaatca acgt
Border_1 (11206_LB1)
GCCTTTTCAGAAATGGATAAATAGCCTTGCTTCCTATTATATCTTCCCAAATTACCAATACATTACACTAGCATCTGAATTTCATAACCAATCTCGATAC
ACCAAATCGAATTCAAWTTCGGCGTTAATTCAGTACATTAAAAACGTCCGCAATGTGTTATTAAGTTGTCTAAGCGTCAATTTGTTTACACCACAATTTG
ATTTGAAAGAAGGCCCGGAGGGCCCAGCCCTGCAGTACACCACACCAAATTTTGAGACAAAACACATGGCAAGGTTTTAAGCAATAACAAGCCAAAAGAC
TAACTAAGAAATAGTTAAGAAAGGGACTTTCCTGCGGTCTCCCTGTGTTAAAGCACCAAGTGTTTCTAGTCTCTTTGGCAACAATAGAGGCAAAGCGGCG
TTCCCCACCGAGATTAGTGAAGAGTAGTCTGACAGGACCAAAACAAAAGAACTATCAACTTCAACAGCATACTTTTGCTATTGGACGGATACAAAATTAA
ACACAAGCGTTGTCATTCAACCTATATTCAGGTGCAGATGTCTGATTTGACCGGTGAGTTCTTCCAAATTGCTGAATTGCACGATCAGCACTCCAGGGAA
GCTCTAAAGTCAAGTGAACCCTTCTTCTTMTGCAGACATTAGCATACTGAATTTCATACCCAATCTCCGATACACCTACATGN
| Start of BLAST Alignment: | NT 6342 / Exon 21 of 31 |
| First 15 bp Perfect Match: | NT 6318 / Intron 20 of 30 |
BLAST Details: Query Sequence: 11206_LB1 Length: (683 letters) Database: Genes from AGI, Total Genome (DNA); Smallest Sum High Probability Sequences producing High-scoring Segment Pairs: Score P(N) N At1g79350 68414.t08456 DNA-binding protein, putative cont... 2158 8.0e-92 1 >At1g79350 68414.t08456 DNA-binding protein, putative contains Pfam PF00628: PHD-finger domain; contains TIGRFAMS TIGR01053: zinc finger domain, LSD1 subclass; contains Pfam PF00271: Helicase conserved C-terminal domain; similar to WSSV086 (GI:19481678)[shrimp white spot syndrome virus]; similar to nuclear protein Np95 (GI:17939938) [Mus musculus] Length = 8760 Minus Strand HSPs: Score = 2158 (329.8 bits), Expect = 8.0e-92, P = 8.0e-92 Identities = 469/499 (93%), Positives = 470/499 (94%), Strand = Minus / Plus Query: 680 TGTAGGTGTATCGGAGATTGGGTATGAAATTCAGTATGCTAATGTCTGCAKAAGAAGAAG 621 | | || |||| || ||| | || |||| ||| || ||||||||+|| |||||| Sbjct: 6051 TTTGGGGGTATT--AG-TTGATT-TGGAATTTTTTATA-TA-TGTCTGCAGAA-AAGAAG 6103 Query: 620 GGTTCACTTGACTTTAGAGCTTCCCTGGAGTGCTGATCGTGCAATTCAGCAATTTGGAAG 561 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6104 GGTTCACTTGACTTTAGAGCTTCCCTGGAGTGCTGATCGTGCAATTCAGCAATTTGGAAG 6163 Query: 560 AACTCACCGGTCAAATCAGACATCTGCACCTGAATATAGGTTGAATGACAACGCTTGTGT 501 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6164 AACTCACCGGTCAAATCAGACATCTGCACCTGAATATAGGTTGAATGACAACGCTTGTGT 6223 Query: 500 TTAATTTTGTATCCGTCCAATAGCAAAAGTATGCTGTTGAAGTTGATAGTTCTTTTGTTT 441 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6224 TTAATTTTGTATCCGTCCAATAGCAAAAGTATGCTGTTGAAGTTGATAGTTCTTTTGTTT 6283 Query: 440 TGGTCCTGTCAGACTACTCTTCACTAATCTCGGTGGGGAACGCCGCTTTGCCTCTATTGT 381 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6284 TGGTCCTGTCAGACTACTCTTCACTAATCTCGGTGGGGAACGCCGCTTTGCCTCTATTGT 6343 Query: 380 TGCCAAAGAGACTAGAAACACTTGGTGCTTTAACACAGGGAGACCGCAGGAAAGTCCCTT 321 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6344 TGC-AAAGAGACTAGAAACACTTGGTGCTTTAACACAGGGAGACCGCAGGAAAGTCCCTT 6402 Query: 320 TCTTAACTATTTCTTAGTTAGTCTTTTGGCTTGTTATTGCTTAAAACCTTGCCATGTGTT 261 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6403 TCTTAACTATTTCTTAGTTAGTCTTTTGGCTTGTTATTGCTTAAAACCTTGCCATGTGTT 6462 Query: 260 TTGTCTCAAAATTTGGTGTGGTGTACTGCAGGGCTGGGCCCTCCGGGCCTTCTTTCAAAT 201 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 6463 TTGTCTCAAAATTTGGTGTGGTGTACTGCAGGGCTGGGCCCTCCGGGCCTTCTTTGAGTG 6522 Query: 200 C--A-AATTGTGGT-GTAA 186 | | |||| || | |||| Sbjct: 6523 CGTATAATTATGATAGTAA 6541
Border_2 (11206_LB2)
GCCTTTTCAGAAATGGATAAATAGCCTTGCTTCCTATTATATCTTCCCAAATTACCAATACATTACACTAGCATCTGAATTTCATAACCAATCTCGATAC
ACCAAATCGAATTCAATTCGGCGTTAATTCAGTACATTAAAAACGTCCGCAATGTGTTATTAAGTTGTCTAAGCGTATCACACCACTTTGGTAAAAAATC
CTTGATGGTGATGTATCGAGGCATAATGGAGCAGGTATTCCTCATAAAAGCCTGTAGTCTCTTAACTCCTTAATTTTGCTTCTTCAGTATTTAGGAACAA
TGATAACGGATAAAGTGTGAAATATAGTATGGCTTAATTGTCAGGAGAAACTACCTGTTCTTCCTCCTGGATGCTCGATTGATGAACCCGAAACAGTTAA
AGAGTTTTTGACCAAGGCAAGGGCTGCTCTTGTTGCGGTTGGAATTGTTAGGGACAGTGTTCTGGGTATGCTTTGCTCGTAATTTCTCTTTTTCCGTACA
GAATTCAAATTCTAGTTGTAGTAATCTCCTTTCTTACTTTACTTCATTAATGATACAGCCAATGGGAAAGATGTTGGAAGGTTTTCAGGACGTATTATTG
ATTCTGACATGCATGATGTTGGACGATTTTTGAATCGCCTCTTAGGATTGCCACCTGATATCCAGAATAGGTATTATGCGTCAATTGGAAATTTGCTCTA
TGTAACTTACCTTCCATTTTAAAAGCAACTTCCGTTTGTATTAATGCTTTCTATTCTTGTGCTGTACAGGCTGTTTGAATTGTTTACTAGTATATTAGAC
GTTCTTGTACATAATGCTCGGATAGAAGGAAGTTTTGACTCAGGAATT
| Start of BLAST Alignment: | NT 6316 / Intron 20 of 30 |
| First 15 bp Perfect Match: | NT 6342 / Exon 21 of 31 |
BLAST Details: Query Sequence: 11206_LB2 Length: (848 letters) Database: Genes from AGI, Total Genome (DNA); Smallest Sum High Probability Sequences producing High-scoring Segment Pairs: Score P(N) N At1g79350 68414.t08456 DNA-binding protein, putative cont... 3323 1.1e-144 1 At4g09960 68417.t01553 MADS-box protein (AGL11) 202 0.76 1 At5g30852 68418.t03356 pseudogene, hypothetical protein s... 192 0.97 1 >At1g79350 68414.t08456 DNA-binding protein, putative contains Pfam PF00628: PHD-finger domain; contains TIGRFAMS TIGR01053: zinc finger domain, LSD1 subclass; contains Pfam PF00271: Helicase conserved C-terminal domain; similar to WSSV086 (GI:19481678)[shrimp white spot syndrome virus]; similar to nuclear protein Np95 (GI:17939938) [Mus musculus] Length = 8760 Plus Strand HSPs: Score = 3323 (504.6 bits), Expect = 1.1e-144, P = 1.1e-144 Identities = 679/691 (98%), Positives = 679/691 (98%), Strand = Plus / Plus Query: 160 TTAAGTT-GTCTAAGCGTATCACACCA-CTTTGGTAAAAAATCCTTGATGGTGATGTATC 217 || ||| || ||| ||| | | | |||||||||||||||||||||||||||||||| Sbjct: 6516 TTGAGTGCGTATAAT--TATGATAGTAACTTTGGTAAAAAATCCTTGATGGTGATGTATC 6573 Query: 218 GAGGCATAATGGAGCAGGTATTCCTCATAAAAGCCTGTAGTCTCTTAACTCCTTAATTTT 277 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6574 GAGGCATAATGGAGCAGGTATTCCTCATAAAAGCCTGTAGTCTCTTAACTCCTTAATTTT 6633 Query: 278 GCTTCTTCAGTATTTAGGAACAATGATAACGGATAAAGTGTGAAATATAGTATGGCTTAA 337 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6634 GCTTCTTCAGTATTTAGGAACAATGATAACGGATAAAGTGTGAAATATAGTATGGCTTAA 6693 Query: 338 TTGTCAGGAGAAACTACCTGTTCTTCCTCCTGGATGCTCGATTGATGAACCCGAAACAGT 397 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6694 TTGTCAGGAGAAACTACCTGTTCTTCCTCCTGGATGCTCGATTGATGAACCCGAAACAGT 6753 Query: 398 TAAAGAGTTTTTGACCAAGGCAAGGGCTGCTCTTGTTGCGGTTGGAATTGTTAGGGACAG 457 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6754 TAAAGAGTTTTTGACCAAGGCAAGGGCTGCTCTTGTTGCGGTTGGAATTGTTAGGGACAG 6813 Query: 458 TGTTCTGGGTATGCTTTGCTCGTAATTTCTCTTTTTCCGTACAGAATTCAAATTCTAGTT 517 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6814 TGTTCTGGGTATGCTTTGCTCGTAATTTCTCTTTTTCCGTACAGAATTCAAATTCTAGTT 6873 Query: 518 GTAGTAATCTCCTTTCTTACTTTACTTCATTAATGATACAGCCAATGGGAAAGATGTTGG 577 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6874 GTAGTAATCTCCTTTCTTACTTTACTTCATTAATGATACAGCCAATGGGAAAGATGTTGG 6933 Query: 578 AAGGTTTTCAGGACGTATTATTGATTCTGACATGCATGATGTTGGACGATTTTTGAATCG 637 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6934 AAGGTTTTCAGGACGTATTATTGATTCTGACATGCATGATGTTGGACGATTTTTGAATCG 6993 Query: 638 CCTCTTAGGATTGCCACCTGATATCCAGAATAGGTATTATGCGTCAATTGGAAATTTGCT 697 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6994 CCTCTTAGGATTGCCACCTGATATCCAGAATAGGTATTATGCGTCAATTGGAAATTTGCT 7053 Query: 698 CTATGTAACTTACCTTCCATTTTAAAAGCAACTTCCGTTTGTATTAATGCTTTCTATTCT 757 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7054 CTATGTAACTTACCTTCCATTTTAAAAGCAACTTCCGTTTGTATTAATGCTTTCTATTCT 7113 Query: 758 TGTGCTGTACAGGCTGTTTGAATTGTTTACTAGTATATTAGACGTTCTTGTACATAATGC 817 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7114 TGTGCTGTACAGGCTGTTTGAATTGTTTACTAGTATATTAGACGTTCTTGTACATAATGC 7173 Query: 818 TCGGATAGAAGGAAGTTTTGACTCAGGAATT 848 ||||||||||||||||||||||||||||||| Sbjct: 7174 TCGGATAGAAGGAAGTTTTGACTCAGGAATT 7204 >At4g09960 68417.t01553 MADS-box protein (AGL11) Length = 4322 Plus Strand HSPs: Score = 202 (36.4 bits), Expect = 1.4, P = 0.76 Identities = 352/656 (53%), Positives = 352/656 (53%), Strand = Plus / Plus