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At1g08520 SYNGENTA 11361

Genomic Sequence (from TAIR)
aataatgtttgtggtctatattagttaccacttgtttactacatccaagcgattgaattcgcatttcccatactcttgacttaattaaaccttgagattt
catgatttattatgcaaaatttaatccttcgctatctatttgttcctaaaagatataaattgaataaaaacgtaactctccaattaataagaaaaacttc
tttaattatttttctaggttaattaataaatttataaaacaataaatatcatattagaaattcatactaataaattttgagacattttattgaaatctta
atgtggatagtgctgcaatcaggaaaggatgacgagacaaaagatagagaagcaaaagtaagctgataaggtttgatacagtagaaaatactatctctta
acttcttcttcttcttcttcttcttctcctatctttgaaaATGGCGATGACTCCGGTCGCGTCATCATCTCCAGTTTCAACCTGCAGACTCTTTCGCTGC
AATCTCCTCCCTGATCTCTTACCTAAGCCTCTGTTTCTCTCCCTCCCCAAACGAAACAGAATTGCCTCGTGCCGCTTCACTGTACGTGCCTCCGCGAAT
GCTACCGTCGAATCCCCTAACGGTGTCCCTGCCTCCACATCAGATACGGATACGGAGACGGATACCACCTCCTATGGCCGACAGTTTTTCCCTTTGGCCG
CAGTTGTTGGCCAGgtcagagaatttgcaatttgattctgcaggttgcataattctactcaatttgatttagttggagttgggtataggaaaaagcttca
gtttttcatcagtgaactgtgtgttatgggacttttacatttgtttgttcaacttgttagatgccgaaagcctcacagaggatgtaatttgtttgcttta
actaaatgttgtttgtagGAAGGCATAAAAACTGCTCTTTTACTTGGCGCGGTTGATCGTGAAATCGGAGGGATTGCCATTTCAGGTCGTAGAGGCACTG
CAAAAACAGTCATGGCGCGAGGGCTTCATGAAATCCTCCCTCCTATTGAAGTTGTTGTAGGCTCAATATCAAATGCTGACCCAGCTTGTCCAGATGAgta
agattcttacaatctgagaaagaaattgcttttcttcttcttttaattcttacactgttggcttgtaccttttgtgatatatgtagGTGGGAAGATGACT
TAGATGAGCGCATAGAGTACAATGCTGACAATACCATTAAGACTGAGATTGTCAAATCTCCTTTCATTCAGgtacatttagttttaggaggcattacaat
ttttctgaaattgtttttctttttacttaggttttcctgtcgtttatgtcacacagATTCCACTAGGAGTTACAGAAGACAGACTCATTGGGTCTGTTGA
TGTTGAGGAGTCTGTGAAAAGGGGGACAACTGTTTTCCAACCTGGTCTTTTGGCTGAAGCCCATAGAGGAGTGTTGTATGTTGATGAAATAAATCTCTTA
GATGAGGGAATTAGTAATTTGCTTCTCAATGTATTGACGGATGGTGTTAATATAGTTGAAAGAGAAGGAATCAGCTTTAGGCACCCGTGCAAACCACTTT
TAATTGCAACCTATAACCCTGAAGAAGGTGCTGTTCGAGAGCACTTGCTAGACCGTGTTGCCATTAATTTAAGgtactactggagtttataaatcaagtg
tgataaatattgcctgtttcttttgggtaattcccatttctttctctttttacatcacgatgttaacctttgcagTGCAGACCTACCTATGAGTTTTGAA
GATCGTGTCGCAGCAGTTGGAATTGCCACACAGTTTCAGGAACGCTGTAATGAGGTTTTTAGAATGGTAAATGAAGAGACAGAAACAGCAAAGACGCAGg
tatcttcaaatgaattaagaaaaaaagggcctcattagtaaaaatttgatgggatgctatgcttctcatcccacttttctcgatcataatccagtgcatt
ttctctgactttagATTATATTGGCTAGAGAATATTTGAAAGATGTCAAGATAAGTAGAGAGCAATTGAAGTATCTGGTTTTGGAAGCTGTCCGAGGTGG
TGTCCAGgtattgagcaaaaattctgaagtaattttttgttaatggaagaaatacacttagtaacatattcctggaagaaaaaggataaacacgaaaaga
aaggacaagatgcatgcaatgatgcaacataatgtcacgattatagacttcaactagtatagggctcaagaaatggctcaccacaggcagaaagatacat
ctagatagagttgttttgatttagaaacaacgctggaaaaagaagggcctggcatcaaatgcttttgttgcgctgttgattgtaatatttcaccaagtta
tgatcatatcactatagttatatttctgcgtttggtttacttggtagttacttctcatggcgtatcttttgtcgatgattacctggaatcgtttaatact
cctttcccaaataacaaatttatgatacagGGACACCGCGCCGAATTGTATGCAGCTCGTGTGGCGAAGTGTTTAGCTGCAATTGAAGGACGAGAAAAAG
TCACAATCGATGACCTCAGAAAGGCCgtaagtactcttctctagctcattcatttttgttttctttcccagaacgatcaagcaagtcataaacttataga
attagtcatcctacgtttactttcactttccttgtattgtctttgtctataattgaacatcttaatagaaatttttgattagcaatgtagaatgacgctc
tataatgatttggatggagtatttatgatatcctctagttattgattagcaaatgtggtccattttttcaatagGTTGAGCTGGTCATTCTTCCTCGTTC
ATCACTAGATGAGACTCCACCTGAACAACAAAACCAACCACCACCTCCTCCACCTCCTCCACAAAATAGCGAATCTGGAGAAGAAGAAAATGAAGAAGAA
CAAGAAGAAGAAGAAGAGgtcagtggatgcagtacacattattctctcgttgaacacacgttcaaggttctaaagtagaaatcattaaccaatgtagGAT
GAAAGCAATGAAGAAAATGAAAATGAGCAGCAACAGGACCAAATACCTGAAGAGTTTATATTTGACGCTGAGGGCGGTCTGGTGGATGAGAAACTCCTCT
TCTTTGCTCAACAAGCCCAGAAACGTCGGGGGAAAGCTGGCAGGGCGAAGAATGTCATATTCTCAGAAGATAGAGGACGCTACATAAAGCCAATGCTTCC
AAAGgtttgcccttaacaaattctcaggctcccaaacatgcatagtccttaacaaattttactttgatagGGTCCAGTAAAAAGATTAGCTGTGGATGCA
ACCCTTAGAGCAGCTGCACCATACCAGAAATTGCGCAGAGAGAAGGATATCTCAGGAACTAGGAAAGTCTTTGTTGAGAAGACAGATATGAGGGCCAAAA
GAATGGCAAGGAAAGCTGGAGCCCTGgtactgaaccttgtccatacattcttctaaaagattgtatataaacagtttccttgatacaacattattctcac
tttatactttaaacagatgtttggcatgataaatttgacagtttccttgacacaagcttcagtgaaaacatagataatatctgattacgcttctgtttac
cattgttgtatggcagGTTATCTTTGTGGTTGATGCAAGTGGCAGTATGGCATTGAATCGTATGCAAAACGCCAAAGGTGCTGCACTCAAACTACTGGCA
GAGAGCTATACTAGCAGGGATCAGgtaaaggttactttttttgaatagttaacgtgcttgttgctagtttggatgaattcattgggccttcggatgagac
tcaatacaccagtaattggtttagGTTTCGATTATTCCTTTCCGAGGGGATGCTGCGGAAGTGCTCTTGCCCCCTTCTAGATCAATAGCAATGGCAAGGA
ATCGTCTTGAGAGACTTCCTTGTGGTGGTGGTTCTCCTCTTGCCCATGGTTTAACAACGgtatgtcaaatattatggtgttgttagtaagataactgcta
gtatcgactaaattgtgggtcagcataatcgtaacagtaacaactatattcatatcagGCTGTAAGAGTAGGACTTAACGCAGAGAAGAGTGGTGATGTC
GGGCGCATAATGATTGTTGCGATAACCGATGGTCGAGCCAACATTACACTGAAAAGATCAACTGATCCGGAGTCTATTGCCCCAGATGCTCCTAGACCCA
CGTCCAAAGAATTGAAGgtaaacagcttctaacggaaaacataaagcaacacaagctcttcactgatattatgtaagaaggcagatgcagtgattaaaaa
tgcgggtgttgtgttgtttagGATGAGATTCTGGAAGTTGCTGGGAAGATATACAAGGCAGGGATGTCTCTTCTAGTGATTGATACCGAGAACAAGTTTG
TTTCAACTGGTTTTGCAAAGGAGATCGCAAGAGTTGCTCAAGgttgggtctctgcaattgattttgagatatttttttttgtcatttcaaagcagaaaat
aatcacattgtgttttgattgttcttcttcctcacagGAAAATATTATTACTTGCCAAATGCTTCGGATGCTGTAATCTCGGCCACCACTAGGGATGCAC
TATCTGATCTGAAGAATTCTTGAcctcattttgtctgcaataccttgattctggatcaaagtgtatattctaattgtgcaacacatcagtcactaaacat
gaaattataagaaatgaaattttgttttaacatactcttaaaatgaatttccgattttattccgttggtcggtaattgacgactgatatgatgatgcatt
agtgacagatcactgtttgtattaagaagaagacgatgaagctgcaatattcacaattgatacaagaattaagatagtcggtataatcccggtttgcagt
aaaccctactctaatgtctaaaccacatcacaacatcaaatagatggttcggtggtttagttacggcagatacaccggcctgaaccgaataaaagaaaac
tggacttggctcctggagaagagaagactgtacagctttctgaattccgaaagaaATGAAATCTCTCTGCTTCATTTCTACAGCTCCATTGATTCGTTCG
C

Border_1 (11361_AbB_U)

TCTCTCCCTCCCCAAACGAAACAGAATTGCCTCGTGCCGCTTCACTGTACGTGCCTCCGCGAATGCTACCGTCGAATCCCCTAACGGTGTCCCTGCCTCC
ACATCAGATACGGATACGGAGACGGATACCACCTCCTATGGCCGACAGTTTTTCCCTTTGGCCGCAGTTGTTGGCCAGGTCAGAGAATTTGCAATTTGAT
TCTGCAGGTTGCATAATTCTACTCAATTTGATTTAGTTGGAGTTGGGTATAGGAAAAAGCTTCAGTTTTTCATCAGTGAACTGTGTGTTATGGGACTTTT
ACATTTGTTTGTTCAACTTGTTAGATGCCGAAAGCCTCACAGAGGATGTAATTTGTTTGCTTTAACTAAATGTTGTTTGTAGGAAGGCATAAAAACTGCT
CTTTTACTTGGCGCGGTTGATCGTGAAATCGGAGGGATTGCCATTTCAGGTCGTAGAGGCACT:GCAAAAACAGTCATGGCGCGAGGGCTTCATGAAATC
CTCCCTCCTATTGAAGTTGTTGT::AGGCTCAATAT:CAAATGCTGACCCAGCTTGTCCAGATGAGTAAGATTCTTACAATC:TGAGAAAGAAATTGCGG
ACAAAT:TGTT:GACAATCTGAATTGACGCTATCCCAATGTACGGGTTCCGGTTCCCAATGTACGGCTTTGG:GTTCCCA:AT:GTACG:TGCTATCCAC
AGGAAAGAGACCTTT:TCGACCTTTTTCCCCTGCTAGGGCAATTTGCCCTAGCATCTSMKSYRYAYWTWRKKWWMSGRSGGATSMTTMSMMYTYKWYYRR
RWTKYGKTWKYSYWTKWMYWKRRKYKKKCCMGYSTSCCCSKYYWYSTCMYWCMRAWWYCMSTASKMSKKMMRGWMRWYWGACYCAKWKCRGTCTGTKSRY
RYKGWGRARWCWGWGAAAAGGGGGACAACTGTTTTCCAACCTGGTCTTTTGGCTGAAGCCCATAGAGGAGTGTTGTATGTTGATGAAATA:AATCTCTTA
GATGAGGGGAATTAGKAATTTGCTTCTCAAT:G:TATTGA:::CGGATGGTGTTAATATAGTTGAAAGAG:AA::GGAATCAGC:TTTAGGCA:CCCGTG
CAAACCACTTTTAATTGCAA:CCTATAA:CCCTGAAGAAGGTGCTGBTCCGAGARCACTTTGCTAAAACCGGGGTGNCATTAATTTAAAGGGCCTACTGG
GAGTTATAAAANCAAGGGGGAAAAAAATGGCTGGTTTTTTTNGGGAATTCCAATTTTTTTTNGTTNNNCNNAAAAAANNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN

Start of BLAST Alignment:NT 95 / Exon 1 of 15
First 15 bp Perfect Match:NT 95 / Exon 1 of 15
BLAST Details:
Query Sequence: 11361_AbB_U 
Length: (1350 letters) 
Database: Genes from AGI, Total Genome (DNA);
                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

At1g08520 68414.t00841 magnesium-chelatase subunit chlD, ...  2965  1.9e-194  2
At2g19250 68415.t02132 pseudogene, similar to Magnesium-c...   363  3.5e-08   2
At4g18480 68417.t02581 magnesium-chelatase subunit chlI, ...   312  1.6e-05   1
At5g45930 68418.t05255 magnesium-chelatase subunit chlI, ...   292  0.00013   1


>At1g08520 68414.t00841 magnesium-chelatase subunit chlD, chloroplast, putative
           / Mg-protoporphyrin IX chelatase, putative (CHLD) similar to
           Mg-chelatase SP|O24133 from Nicotiana tabacum, GB:AF014399
           GI:2318116 from [Pisum sativum]
        Length = 4547

  Plus Strand HSPs:

 Score = 2965 (450.9 bits), Expect = 1.9e-194, Sum P(2) = 1.9e-194
 Identities = 593/593 (100%), Positives = 593/593 (100%), Strand = Plus / Plus

Query:     1 TCTCTCCCTCCCCAAACGAAACAGAATTGCCTCGTGCCGCTTCACTGTACGTGCCTCCGC 60
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:   222 TCTCTCCCTCCCCAAACGAAACAGAATTGCCTCGTGCCGCTTCACTGTACGTGCCTCCGC 281

Query:    61 GAATGCTACCGTCGAATCCCCTAACGGTGTCCCTGCCTCCACATCAGATACGGATACGGA 120
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:   282 GAATGCTACCGTCGAATCCCCTAACGGTGTCCCTGCCTCCACATCAGATACGGATACGGA 341

Query:   121 GACGGATACCACCTCCTATGGCCGACAGTTTTTCCCTTTGGCCGCAGTTGTTGGCCAGGT 180
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:   342 GACGGATACCACCTCCTATGGCCGACAGTTTTTCCCTTTGGCCGCAGTTGTTGGCCAGGT 401

Query:   181 CAGAGAATTTGCAATTTGATTCTGCAGGTTGCATAATTCTACTCAATTTGATTTAGTTGG 240
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:   402 CAGAGAATTTGCAATTTGATTCTGCAGGTTGCATAATTCTACTCAATTTGATTTAGTTGG 461

Query:   241 AGTTGGGTATAGGAAAAAGCTTCAGTTTTTCATCAGTGAACTGTGTGTTATGGGACTTTT 300
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:   462 AGTTGGGTATAGGAAAAAGCTTCAGTTTTTCATCAGTGAACTGTGTGTTATGGGACTTTT 521

Query:   301 ACATTTGTTTGTTCAACTTGTTAGATGCCGAAAGCCTCACAGAGGATGTAATTTGTTTGC 360
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:   522 ACATTTGTTTGTTCAACTTGTTAGATGCCGAAAGCCTCACAGAGGATGTAATTTGTTTGC 581

Query:   361 TTTAACTAAATGTTGTTTGTAGGAAGGCATAAAAACTGCTCTTTTACTTGGCGCGGTTGA 420
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:   582 TTTAACTAAATGTTGTTTGTAGGAAGGCATAAAAACTGCTCTTTTACTTGGCGCGGTTGA 641

Query:   421 TCGTGAAATCGGAGGGATTGCCATTTCAGGTCGTAGAGGCACTGCAAAAACAGTCATGGC 480
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:   642 TCGTGAAATCGGAGGGATTGCCATTTCAGGTCGTAGAGGCACTGCAAAAACAGTCATGGC 701

Query:   481 GCGAGGGCTTCATGAAATCCTCCCTCCTATTGAAGTTGTTGTAGGCTCAATATCAAATGC 540
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:   702 GCGAGGGCTTCATGAAATCCTCCCTCCTATTGAAGTTGTTGTAGGCTCAATATCAAATGC 761

Query:   541 TGACCCAGCTTGTCCAGATGAGTAAGATTCTTACAATCTGAGAAAGAAATTGC 593
             |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:   762 TGACCCAGCTTGTCCAGATGAGTAAGATTCTTACAATCTGAGAAAGAAATTGC 814

 Score = 1482 (228.4 bits), Expect = 1.9e-194, Sum P(2) = 1.9e-194
 Identities = 320/441 (72%), Positives = 411/441 (93%), Strand = Plus / Plus

Query:   768 GGATSM-TTMSMMYTYKWYYRRRWTKYGKTWKYSYWTKWMYWKRRKYKKKCCMGYSTSCC 826
             ||| ++ ||+++++|+++++++++|+ |+|++++++|+++++++++++++||  ++|  |
Sbjct:   972 GGAGGCATTACAATTTTTCTGAAATT-GTTTTTCTTTTTACTTAGGTTTTCC--TGT--C 1026

Query:   827 CSKYYWYSTCMYWCMRAWWYCMSTASKMSKKMMRGWMRWYWGACYCAKWKCRGTCTGTKS 886
              +++++++||+++|++|+++|++||+++++++++|++++++|||+||+++ +||||||++
Sbjct:  1027 -GTTTATGTCACACAGATTCCACTAGGAGTTACAGAAGACAGACTCATTG-GGTCTGTTG 1084

Query:   887 RYRYKGWGRARWCWGWGAAAAGGGGGACAACTGTTTTCCAACCTGGTCTTTTGGCTGAAG 946
             +++++|+|+|++|+|+||||||||||||||||||||||||||||||||||||||||||||
Sbjct:  1085 ATGTTGAGGAGTCTGTGAAAAGGGGGACAACTGTTTTCCAACCTGGTCTTTTGGCTGAAG 1144

Query:   947 CCCATAGAGGAGTGTTGTATGTTGATGAAATAAATCTCTTAGATGAGGGGAATTAGKAAT 1006
             ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||+|||
Sbjct:  1145 CCCATAGAGGAGTGTTGTATGTTGATGAAATAAATCTCTTAGATGAGGG-AATTAGTAAT 1203

Query:  1007 TTGCTTCTCAATGTATTGACGGATGGTGTTAATATAGTTGAAAGAGAAGGAATCAGCTTT 1066
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:  1204 TTGCTTCTCAATGTATTGACGGATGGTGTTAATATAGTTGAAAGAGAAGGAATCAGCTTT 1263

Query:  1067 AGGCACCCGTGCAAACCACTTTTAATTGCAACCTATAACCCTGAAGAAGGTGCTGBTCCG 1126
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
Sbjct:  1264 AGGCACCCGTGCAAACCACTTTTAATTGCAACCTATAACCCTGAAGAAGGTGCTGTTC-G 1322

Query:  1127 AGARCACTTTGCTAAAACCGGGGTGNCATTAATTTAAAGGGCCTACTGGGAGTTATA-AA 1185
             |||+||||| |||| | ||| | || ||||||||||| ||  ||||||| |||| || ||
Sbjct:  1323 AGAGCACTT-GCTAGA-CCGTGTTGCCATTAATTTAA-GGTACTACTGG-AGTT-TATAA 1377

Query:  1186 ANCAAGGGGGAAAAAAATGGC 1206
             | |||| | || ||| || ||
Sbjct:  1378 ATCAAGTGTGATAAATATTGC 1398


>At2g19250 68415.t02132 pseudogene, similar to Magnesium-chelatase subunit
           chlD, chloroplast precursor (Mg- protoporphyrin IX chelatase)
           (Mg-chelatase subunit D). [Common tobacco] similar to SP|O24133
           Magnesium-chelatase subunit chlD, chloroplast precursor
           (Mg-protoporphyrin IX chelatase) (Mg-chelatase subunit D) {Nicotiana
           tabacum}; blastp match of 78% identity and 5.0e-07 P-value to
           SP|O24133|CHLD_TOBAC Magnesium-chelatase subunit chlD, chloroplast
           precursor (Mg- protoporphyrin IX chelatase) (Mg-chelatase subunit
           D). [Common tobacco] {Nicotiana tabacum}
        Length = 3015

  Plus Strand HSPs:

 Score = 363 (60.5 bits), Expect = 3.5e-08, Sum P(2) = 3.5e-08
 Identities = 84/98 (85%), Positives = 85/98 (86%), Strand = Plus / Plus