At1g08520 SYNGENTA 11361
Genomic Sequence (from TAIR)
aataatgtttgtggtctatattagttaccacttgtttactacatccaagcgattgaattcgcatttcccatactcttgacttaattaaaccttgagattt catgatttattatgcaaaatttaatccttcgctatctatttgttcctaaaagatataaattgaataaaaacgtaactctccaattaataagaaaaacttc tttaattatttttctaggttaattaataaatttataaaacaataaatatcatattagaaattcatactaataaattttgagacattttattgaaatctta atgtggatagtgctgcaatcaggaaaggatgacgagacaaaagatagagaagcaaaagtaagctgataaggtttgatacagtagaaaatactatctctta acttcttcttcttcttcttcttcttctcctatctttgaaaATGGCGATGACTCCGGTCGCGTCATCATCTCCAGTTTCAACCTGCAGACTCTTTCGCTGC AATCTCCTCCCTGATCTCTTACCTAAGCCTCTGTT►TCTCTCCCTCCCCAAACGAAACAGAATTGCCTCGTGCCGCTTCACTGTACGTGCCTCCGCGAAT GCTACCGTCGAATCCCCTAACGGTGTCCCTGCCTCCACATCAGATACGGATACGGAGACGGATACCACCTCCTATGGCCGACAGTTTTTCCCTTTGGCCG CAGTTGTTGGCCAGgtcagagaatttgcaatttgattctgcaggttgcataattctactcaatttgatttagttggagttgggtataggaaaaagcttca gtttttcatcagtgaactgtgtgttatgggacttttacatttgtttgttcaacttgttagatgccgaaagcctcacagaggatgtaatttgtttgcttta actaaatgttgtttgtagGAAGGCATAAAAACTGCTCTTTTACTTGGCGCGGTTGATCGTGAAATCGGAGGGATTGCCATTTCAGGTCGTAGAGGCACTG CAAAAACAGTCATGGCGCGAGGGCTTCATGAAATCCTCCCTCCTATTGAAGTTGTTGTAGGCTCAATATCAAATGCTGACCCAGCTTGTCCAGATGAgta agattcttacaatctgagaaagaaattgcttttcttcttcttttaattcttacactgttggcttgtaccttttgtgatatatgtagGTGGGAAGATGACT TAGATGAGCGCATAGAGTACAATGCTGACAATACCATTAAGACTGAGATTGTCAAATCTCCTTTCATTCAGgtacatttagttttaggaggcattacaat ttttctgaaattgtttttctttttacttaggttttcctgtcgtttatgtcacacagATTCCACTAGGAGTTACAGAAGACAGACTCATTGGGTCTGTTGA TGTTGAGGAGTCTGTGAAAAGGGGGACAACTGTTTTCCAACCTGGTCTTTTGGCTGAAGCCCATAGAGGAGTGTTGTATGTTGATGAAATAAATCTCTTA GATGAGGGAATTAGTAATTTGCTTCTCAATGTATTGACGGATGGTGTTAATATAGTTGAAAGAGAAGGAATCAGCTTTAGGCACCCGTGCAAACCACTTT TAATTGCAACCTATAACCCTGAAGAAGGTGCTGTTCGAGAGCACTTGCTAGACCGTGTTGCCATTAATTTAAGgtactactggagtttataaatcaagtg tgataaatattgcctgtttcttttgggtaattcccatttctttctctttttacatcacgatgttaacctttgcagTGCAGACCTACCTATGAGTTTTGAA GATCGTGTCGCAGCAGTTGGAATTGCCACACAGTTTCAGGAACGCTGTAATGAGGTTTTTAGAATGGTAAATGAAGAGACAGAAACAGCAAAGACGCAGg tatcttcaaatgaattaagaaaaaaagggcctcattagtaaaaatttgatgggatgctatgcttctcatcccacttttctcgatcataatccagtgcatt ttctctgactttagATTATATTGGCTAGAGAATATTTGAAAGATGTCAAGATAAGTAGAGAGCAATTGAAGTATCTGGTTTTGGAAGCTGTCCGAGGTGG TGTCCAGgtattgagcaaaaattctgaagtaattttttgttaatggaagaaatacacttagtaacatattcctggaagaaaaaggataaacacgaaaaga aaggacaagatgcatgcaatgatgcaacataatgtcacgattatagacttcaactagtatagggctcaagaaatggctcaccacaggcagaaagatacat ctagatagagttgttttgatttagaaacaacgctggaaaaagaagggcctggcatcaaatgcttttgttgcgctgttgattgtaatatttcaccaagtta tgatcatatcactatagttatatttctgcgtttggtttacttggtagttacttctcatggcgtatcttttgtcgatgattacctggaatcgtttaatact cctttcccaaataacaaatttatgatacagGGACACCGCGCCGAATTGTATGCAGCTCGTGTGGCGAAGTGTTTAGCTGCAATTGAAGGACGAGAAAAAG TCACAATCGATGACCTCAGAAAGGCCgtaagtactcttctctagctcattcatttttgttttctttcccagaacgatcaagcaagtcataaacttataga attagtcatcctacgtttactttcactttccttgtattgtctttgtctataattgaacatcttaatagaaatttttgattagcaatgtagaatgacgctc tataatgatttggatggagtatttatgatatcctctagttattgattagcaaatgtggtccattttttcaatagGTTGAGCTGGTCATTCTTCCTCGTTC ATCACTAGATGAGACTCCACCTGAACAACAAAACCAACCACCACCTCCTCCACCTCCTCCACAAAATAGCGAATCTGGAGAAGAAGAAAATGAAGAAGAA CAAGAAGAAGAAGAAGAGgtcagtggatgcagtacacattattctctcgttgaacacacgttcaaggttctaaagtagaaatcattaaccaatgtagGAT GAAAGCAATGAAGAAAATGAAAATGAGCAGCAACAGGACCAAATACCTGAAGAGTTTATATTTGACGCTGAGGGCGGTCTGGTGGATGAGAAACTCCTCT TCTTTGCTCAACAAGCCCAGAAACGTCGGGGGAAAGCTGGCAGGGCGAAGAATGTCATATTCTCAGAAGATAGAGGACGCTACATAAAGCCAATGCTTCC AAAGgtttgcccttaacaaattctcaggctcccaaacatgcatagtccttaacaaattttactttgatagGGTCCAGTAAAAAGATTAGCTGTGGATGCA ACCCTTAGAGCAGCTGCACCATACCAGAAATTGCGCAGAGAGAAGGATATCTCAGGAACTAGGAAAGTCTTTGTTGAGAAGACAGATATGAGGGCCAAAA GAATGGCAAGGAAAGCTGGAGCCCTGgtactgaaccttgtccatacattcttctaaaagattgtatataaacagtttccttgatacaacattattctcac tttatactttaaacagatgtttggcatgataaatttgacagtttccttgacacaagcttcagtgaaaacatagataatatctgattacgcttctgtttac cattgttgtatggcagGTTATCTTTGTGGTTGATGCAAGTGGCAGTATGGCATTGAATCGTATGCAAAACGCCAAAGGTGCTGCACTCAAACTACTGGCA GAGAGCTATACTAGCAGGGATCAGgtaaaggttactttttttgaatagttaacgtgcttgttgctagtttggatgaattcattgggccttcggatgagac tcaatacaccagtaattggtttagGTTTCGATTATTCCTTTCCGAGGGGATGCTGCGGAAGTGCTCTTGCCCCCTTCTAGATCAATAGCAATGGCAAGGA ATCGTCTTGAGAGACTTCCTTGTGGTGGTGGTTCTCCTCTTGCCCATGGTTTAACAACGgtatgtcaaatattatggtgttgttagtaagataactgcta gtatcgactaaattgtgggtcagcataatcgtaacagtaacaactatattcatatcagGCTGTAAGAGTAGGACTTAACGCAGAGAAGAGTGGTGATGTC GGGCGCATAATGATTGTTGCGATAACCGATGGTCGAGCCAACATTACACTGAAAAGATCAACTGATCCGGAGTCTATTGCCCCAGATGCTCCTAGACCCA CGTCCAAAGAATTGAAGgtaaacagcttctaacggaaaacataaagcaacacaagctcttcactgatattatgtaagaaggcagatgcagtgattaaaaa tgcgggtgttgtgttgtttagGATGAGATTCTGGAAGTTGCTGGGAAGATATACAAGGCAGGGATGTCTCTTCTAGTGATTGATACCGAGAACAAGTTTG TTTCAACTGGTTTTGCAAAGGAGATCGCAAGAGTTGCTCAAGgttgggtctctgcaattgattttgagatatttttttttgtcatttcaaagcagaaaat aatcacattgtgttttgattgttcttcttcctcacagGAAAATATTATTACTTGCCAAATGCTTCGGATGCTGTAATCTCGGCCACCACTAGGGATGCAC TATCTGATCTGAAGAATTCTTGAcctcattttgtctgcaataccttgattctggatcaaagtgtatattctaattgtgcaacacatcagtcactaaacat gaaattataagaaatgaaattttgttttaacatactcttaaaatgaatttccgattttattccgttggtcggtaattgacgactgatatgatgatgcatt agtgacagatcactgtttgtattaagaagaagacgatgaagctgcaatattcacaattgatacaagaattaagatagtcggtataatcccggtttgcagt aaaccctactctaatgtctaaaccacatcacaacatcaaatagatggttcggtggtttagttacggcagatacaccggcctgaaccgaataaaagaaaac tggacttggctcctggagaagagaagactgtacagctttctgaattccgaaagaaATGAAATCTCTCTGCTTCATTTCTACAGCTCCATTGATTCGTTCG C
Border_1 (11361_AbB_U)
TCTCTCCCTCCCCAAACGAAACAGAATTGCCTCGTGCCGCTTCACTGTACGTGCCTCCGCGAATGCTACCGTCGAATCCCCTAACGGTGTCCCTGCCTCC
ACATCAGATACGGATACGGAGACGGATACCACCTCCTATGGCCGACAGTTTTTCCCTTTGGCCGCAGTTGTTGGCCAGGTCAGAGAATTTGCAATTTGAT
TCTGCAGGTTGCATAATTCTACTCAATTTGATTTAGTTGGAGTTGGGTATAGGAAAAAGCTTCAGTTTTTCATCAGTGAACTGTGTGTTATGGGACTTTT
ACATTTGTTTGTTCAACTTGTTAGATGCCGAAAGCCTCACAGAGGATGTAATTTGTTTGCTTTAACTAAATGTTGTTTGTAGGAAGGCATAAAAACTGCT
CTTTTACTTGGCGCGGTTGATCGTGAAATCGGAGGGATTGCCATTTCAGGTCGTAGAGGCACT:GCAAAAACAGTCATGGCGCGAGGGCTTCATGAAATC
CTCCCTCCTATTGAAGTTGTTGT::AGGCTCAATAT:CAAATGCTGACCCAGCTTGTCCAGATGAGTAAGATTCTTACAATC:TGAGAAAGAAATTGCGG
ACAAAT:TGTT:GACAATCTGAATTGACGCTATCCCAATGTACGGGTTCCGGTTCCCAATGTACGGCTTTGG:GTTCCCA:AT:GTACG:TGCTATCCAC
AGGAAAGAGACCTTT:TCGACCTTTTTCCCCTGCTAGGGCAATTTGCCCTAGCATCTSMKSYRYAYWTWRKKWWMSGRSGGATSMTTMSMMYTYKWYYRR
RWTKYGKTWKYSYWTKWMYWKRRKYKKKCCMGYSTSCCCSKYYWYSTCMYWCMRAWWYCMSTASKMSKKMMRGWMRWYWGACYCAKWKCRGTCTGTKSRY
RYKGWGRARWCWGWGAAAAGGGGGACAACTGTTTTCCAACCTGGTCTTTTGGCTGAAGCCCATAGAGGAGTGTTGTATGTTGATGAAATA:AATCTCTTA
GATGAGGGGAATTAGKAATTTGCTTCTCAAT:G:TATTGA:::CGGATGGTGTTAATATAGTTGAAAGAG:AA::GGAATCAGC:TTTAGGCA:CCCGTG
CAAACCACTTTTAATTGCAA:CCTATAA:CCCTGAAGAAGGTGCTGBTCCGAGARCACTTTGCTAAAACCGGGGTGNCATTAATTTAAAGGGCCTACTGG
GAGTTATAAAANCAAGGGGGAAAAAAATGGCTGGTTTTTTTNGGGAATTCCAATTTTTTTTNGTTNNNCNNAAAAAANNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
Start of BLAST Alignment: | NT 95 / Exon 1 of 15 |
First 15 bp Perfect Match: | NT 95 / Exon 1 of 15 |
BLAST Details: Query Sequence: 11361_AbB_U Length: (1350 letters) Database: Genes from AGI, Total Genome (DNA); Smallest Sum High Probability Sequences producing High-scoring Segment Pairs: Score P(N) N At1g08520 68414.t00841 magnesium-chelatase subunit chlD, ... 2965 1.9e-194 2 At2g19250 68415.t02132 pseudogene, similar to Magnesium-c... 363 3.5e-08 2 At4g18480 68417.t02581 magnesium-chelatase subunit chlI, ... 312 1.6e-05 1 At5g45930 68418.t05255 magnesium-chelatase subunit chlI, ... 292 0.00013 1 >At1g08520 68414.t00841 magnesium-chelatase subunit chlD, chloroplast, putative / Mg-protoporphyrin IX chelatase, putative (CHLD) similar to Mg-chelatase SP|O24133 from Nicotiana tabacum, GB:AF014399 GI:2318116 from [Pisum sativum] Length = 4547 Plus Strand HSPs: Score = 2965 (450.9 bits), Expect = 1.9e-194, Sum P(2) = 1.9e-194 Identities = 593/593 (100%), Positives = 593/593 (100%), Strand = Plus / Plus Query: 1 TCTCTCCCTCCCCAAACGAAACAGAATTGCCTCGTGCCGCTTCACTGTACGTGCCTCCGC 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 222 TCTCTCCCTCCCCAAACGAAACAGAATTGCCTCGTGCCGCTTCACTGTACGTGCCTCCGC 281 Query: 61 GAATGCTACCGTCGAATCCCCTAACGGTGTCCCTGCCTCCACATCAGATACGGATACGGA 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 282 GAATGCTACCGTCGAATCCCCTAACGGTGTCCCTGCCTCCACATCAGATACGGATACGGA 341 Query: 121 GACGGATACCACCTCCTATGGCCGACAGTTTTTCCCTTTGGCCGCAGTTGTTGGCCAGGT 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 342 GACGGATACCACCTCCTATGGCCGACAGTTTTTCCCTTTGGCCGCAGTTGTTGGCCAGGT 401 Query: 181 CAGAGAATTTGCAATTTGATTCTGCAGGTTGCATAATTCTACTCAATTTGATTTAGTTGG 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 402 CAGAGAATTTGCAATTTGATTCTGCAGGTTGCATAATTCTACTCAATTTGATTTAGTTGG 461 Query: 241 AGTTGGGTATAGGAAAAAGCTTCAGTTTTTCATCAGTGAACTGTGTGTTATGGGACTTTT 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 462 AGTTGGGTATAGGAAAAAGCTTCAGTTTTTCATCAGTGAACTGTGTGTTATGGGACTTTT 521 Query: 301 ACATTTGTTTGTTCAACTTGTTAGATGCCGAAAGCCTCACAGAGGATGTAATTTGTTTGC 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 522 ACATTTGTTTGTTCAACTTGTTAGATGCCGAAAGCCTCACAGAGGATGTAATTTGTTTGC 581 Query: 361 TTTAACTAAATGTTGTTTGTAGGAAGGCATAAAAACTGCTCTTTTACTTGGCGCGGTTGA 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 582 TTTAACTAAATGTTGTTTGTAGGAAGGCATAAAAACTGCTCTTTTACTTGGCGCGGTTGA 641 Query: 421 TCGTGAAATCGGAGGGATTGCCATTTCAGGTCGTAGAGGCACTGCAAAAACAGTCATGGC 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 642 TCGTGAAATCGGAGGGATTGCCATTTCAGGTCGTAGAGGCACTGCAAAAACAGTCATGGC 701 Query: 481 GCGAGGGCTTCATGAAATCCTCCCTCCTATTGAAGTTGTTGTAGGCTCAATATCAAATGC 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 702 GCGAGGGCTTCATGAAATCCTCCCTCCTATTGAAGTTGTTGTAGGCTCAATATCAAATGC 761 Query: 541 TGACCCAGCTTGTCCAGATGAGTAAGATTCTTACAATCTGAGAAAGAAATTGC 593 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 762 TGACCCAGCTTGTCCAGATGAGTAAGATTCTTACAATCTGAGAAAGAAATTGC 814 Score = 1482 (228.4 bits), Expect = 1.9e-194, Sum P(2) = 1.9e-194 Identities = 320/441 (72%), Positives = 411/441 (93%), Strand = Plus / Plus Query: 768 GGATSM-TTMSMMYTYKWYYRRRWTKYGKTWKYSYWTKWMYWKRRKYKKKCCMGYSTSCC 826 ||| ++ ||+++++|+++++++++|+ |+|++++++|+++++++++++++|| ++| | Sbjct: 972 GGAGGCATTACAATTTTTCTGAAATT-GTTTTTCTTTTTACTTAGGTTTTCC--TGT--C 1026 Query: 827 CSKYYWYSTCMYWCMRAWWYCMSTASKMSKKMMRGWMRWYWGACYCAKWKCRGTCTGTKS 886 +++++++||+++|++|+++|++||+++++++++|++++++|||+||+++ +||||||++ Sbjct: 1027 -GTTTATGTCACACAGATTCCACTAGGAGTTACAGAAGACAGACTCATTG-GGTCTGTTG 1084 Query: 887 RYRYKGWGRARWCWGWGAAAAGGGGGACAACTGTTTTCCAACCTGGTCTTTTGGCTGAAG 946 +++++|+|+|++|+|+|||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1085 ATGTTGAGGAGTCTGTGAAAAGGGGGACAACTGTTTTCCAACCTGGTCTTTTGGCTGAAG 1144 Query: 947 CCCATAGAGGAGTGTTGTATGTTGATGAAATAAATCTCTTAGATGAGGGGAATTAGKAAT 1006 ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||+||| Sbjct: 1145 CCCATAGAGGAGTGTTGTATGTTGATGAAATAAATCTCTTAGATGAGGG-AATTAGTAAT 1203 Query: 1007 TTGCTTCTCAATGTATTGACGGATGGTGTTAATATAGTTGAAAGAGAAGGAATCAGCTTT 1066 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1204 TTGCTTCTCAATGTATTGACGGATGGTGTTAATATAGTTGAAAGAGAAGGAATCAGCTTT 1263 Query: 1067 AGGCACCCGTGCAAACCACTTTTAATTGCAACCTATAACCCTGAAGAAGGTGCTGBTCCG 1126 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| || | Sbjct: 1264 AGGCACCCGTGCAAACCACTTTTAATTGCAACCTATAACCCTGAAGAAGGTGCTGTTC-G 1322 Query: 1127 AGARCACTTTGCTAAAACCGGGGTGNCATTAATTTAAAGGGCCTACTGGGAGTTATA-AA 1185 |||+||||| |||| | ||| | || ||||||||||| || ||||||| |||| || || Sbjct: 1323 AGAGCACTT-GCTAGA-CCGTGTTGCCATTAATTTAA-GGTACTACTGG-AGTT-TATAA 1377 Query: 1186 ANCAAGGGGGAAAAAAATGGC 1206 | |||| | || ||| || || Sbjct: 1378 ATCAAGTGTGATAAATATTGC 1398 >At2g19250 68415.t02132 pseudogene, similar to Magnesium-chelatase subunit chlD, chloroplast precursor (Mg- protoporphyrin IX chelatase) (Mg-chelatase subunit D). [Common tobacco] similar to SP|O24133 Magnesium-chelatase subunit chlD, chloroplast precursor (Mg-protoporphyrin IX chelatase) (Mg-chelatase subunit D) {Nicotiana tabacum}; blastp match of 78% identity and 5.0e-07 P-value to SP|O24133|CHLD_TOBAC Magnesium-chelatase subunit chlD, chloroplast precursor (Mg- protoporphyrin IX chelatase) (Mg-chelatase subunit D). [Common tobacco] {Nicotiana tabacum} Length = 3015 Plus Strand HSPs: Score = 363 (60.5 bits), Expect = 3.5e-08, Sum P(2) = 3.5e-08 Identities = 84/98 (85%), Positives = 85/98 (86%), Strand = Plus / Plus