At4g36630 SYNGENTA 120531
Genomic Sequence (from TAIR)
tgtatgtgtgagagaatattgttaccatgtgtaatactactagttttgtgttattagttgaagatatgagattatccttttagttctattgtttctcaag ttaaatacagttatgatgaaatcagagaagttattgtcgtctagtgaggtgatgatcaaatcttagactttaaatataatattaaactttaaatataata ttgaacttaaagagaacaaaaGGTCCCGTAGCTCAGTTGGTTAGAGCGTTGGTCTTATGAGCCGAAGGTCGCGGGTTCGAGCCCCGCCGGGACCAtttgt ccttaattcatttaaatttttaaattttacgattttttccttttttttcataatttatcaacgcacgttgtgaaaaaaataaaaaatcaatcatctctgt tgtaattggattttgtaacatgatgaatgcgtggtgattcccagaagaagaacccagaaatcgatcgaagatATGGTTCACAACGCTTATGATTCGTTTC AGCTTCTCAAAGATTGTCCCGCTAGGATCGATGCTGTTGAATCCTACGGCTCCAAGCTCTTCGCTGGATGTTATGACGGTTCTCTCCGCATTTACTCTCC ACCGGAATCTTCTGCCTCCGATCCGTCGGAGCTGCATCAAGAGACTTACGTGCTAGAGAAGACGGTAGCTGGATTCTCTAAGAAACCGATTGTGGCGATG GAGGTTTTGGCTTCGAGAGAGTTGCT◄TTTGTCTCTCTCTGAGTCAATTGCGTTTCATGGACTTCCTAATTTGGAGACTGTTGC►TGTGATTACTAAAGC TAAAGGTGCTAATGCTTATTCTTGGGATGATCGGCGTGGGTTCTTGTGTTTCTCTAGGCAAAAGAGAGTCTGTGTTTTCAAGCACGATGgtaaaaatctc tgaaactcaactttgaatcatgaggattggattttgatgaaatgttgtttctgttgattttttagGAGGAGGAGGATTTGTAGAGGTCAGAGACTATGGA GTTCCTGATACTGTCAAGTCTATTTCTTGGTGTGGAGAAAACATCTGTTTAGGCATTAAGAAAGAGTATGTGATACTTAATACTGCTAATGGGACTCTCT CTGAGGTGTTTCCTTCTGGTAGGGTTGCTCCTCCTCTCGTGATATCTCTACCTTCTGGTGAACTTATTTTGGGAAAGgtagttatgcttttcctttttcc cccattcaatgtatttgttcggttttgaaatgttgtcttcattagtttcttcttgtacatgtagGAGAACATTGGAGTTTTTGTTGATCAAAATGGGAAG CTCCTTCAAACAGAGAGAATCTGTTGGTCAGAGGCCCCAACGTCTATTGTCATTCAAAACCCTTATGCGATAGCCTTGTTACCTCGTCGAGTTGAGgtat ataaggttcctgcctagagatattgtagttttgctttccttctagtttctggatacctgttatgtgcttattccttttggctttgttttgatagGTTCGC TTGCTCCGAAGTCCATATCCTTTAATACAGACAATTGTTCTTCAAAACATTCGTCGCCTGGTCAAGAGCAACAATGCTGTGATTGTTGGTTTGGATAACT CTGTTTATGTTCTCTTCCCTGTCTCTATTGGTGCCCAGgtattcactttagccctgagaatattgatgtttcttgctgctgctcatggtttcttgtggat gaatatgaaaatgtgtttcattttacctaatatatcggttgaatatgacactatttcagtattctttgtaaagactttgattttactcgcagtagctgct tttgaaatattttgaaaaggttgagtttcattgtagATTGTGCAATTAACAGCTTCGGGAAATTTTGAGGAAGCCTTAGCTCTATGCAAAGTACTCCCCC CTGATGAGTCAAGCCTACGAGCTGCGAAAGAGAGTTCAATTCACACAAGgtgtgtaaagctagaagccctctcttccttctactagttacacattaatag tgcagttccatgggaatctttttgttcatatttgttgtctcgttatcatgatacagATTTGCTCATTATCTTTTTGAGAACGGGAGCTATGAGGAAGCCA TGGAACACTTCCTCGCATCTCAAGTAGATATCACGCATGTACTTTCCATGTATCCATCCATCATTCTTCCTAAAACAACTATTATTCCTCAACCAGATAA GATGGTGGACATTTCTGGTGATGAAGCATCTCTGTCAAGAGGTTCATCCGGCATTTCAGATGATATGGAGTCTTCATCTCCTCGATATTTTTTGGAATCT GAGGACAATGCAGACCTTGAATCTAAGAAAATGAGTCACAACACTTTGATGGCTCTTATAAAGTACTTGCTGAAGAGGAGGCCGGCTGTTATCGAGAAGG CCACTTCTGAAGGAACAGAAGAGGTCATTTCGGATGCTGTTGGTAAAACTTACGGGGCAAATGATTCATCTAAGTCTAAGAAGTCCAGCAAGgtgcagat gatttatcttccgcgatacctaattgatgactagttcttggatattaacactttataagcttttgggagctactgactgactaattccttggaagttgat gcatggataatataagcagcttcccttgatttgtacgtttgatagtaatttgttggggacttaacatctttttttctgcagGGACGTGGTATGATCCCTC TTAATTCAGGTGCAAGAGAGATGGCAGCAATCCTTGATACAGTCTTCTCCAAGCACTTTTACACACTGGCCAGTCTGGAGCTGCTATAGagttattaaag ggtgtcaactacagtgacgttaagatttgtgaggagattctcatgaaaagtaaaaattattctgcactattagaactgttcaagagcaattcgatgcacc atgaagcccttaagcttcttaaccagctggcggatgagtctaaaacaaaccagtcacaaactgatgttacacagatatttagtcctgagttgatcatcga atatctcaaggcaggttttctcggtgctaacctttcgtctttgtctatctttagattctaaatggttatagaaaactacaaatttgttaaccacctttga ttttggtactgactgaaaataatgagtattctaagaaacagctgtgagatgctaactttctgttggtggatttctctctgcagcctctctgcaggactga tccaatgcttgtcttggagtattctatgcttgtcctggaaagctgtccaactcaaaccatcgacttgtttttgtctggaaatatctcagctgaccttgtc aattcgtatctgaagcagcatgctccaaatatgcagggtagatatttagaacttatgatggcaatgaatgacaccgcagtttctggaatctccaaaacga gatggtgaggaaaccacacttatgggaagcattttcagtgagtttacgttacatattgctggcagtaacaatttggatgatgttacaggtacaaatctat ctttcagaagtgcttgacttgtatgctgcaaagagtgcgcagcagaaatgggatgagaaggatcatcctcctgaaaggaaaaaactattgtctgcgttag agagcatctccggatatagtccgcagcctttgttgaagcgtcttccacgtgatgctctctatgaagagcgtgcagttatattgggcaaaatgaaccaaca tgagcttgctttgtccatctatgttcataaggtacccatcaacatgagcttgctttgtcgatctttaacatgaaccaaatatcattaatttatttcacca aataatcttctaattgttggccagttgtggtaaaaaacactttgatatgcaaatgcattgttagataattgtatcattgtgtagataagtatactctgaa actatttagaactcagatatcggtggattctatggagtgttgttgcttatggcttaactctttgtttttttctttctgatagcttcatgcacctgatctg gcgctggcttactgtgatcgtatatatgagtctgttacttatctaccatctggaaaaccgtcaagcaatatctacctcacagtgctgcaaatatacctga atcctaagaaaagcgcaaaagactttgcaaaacgaattgtagctctaggatcattcgaaagttcagacaccacaaaaatgatggactctgttttatcttc aaaagctaaaggaggccgatccaagaaaattgttgcaatagaaggcgctgaggatatgcgagttggtctcagtagcagcactgacagtggaagaagcgat gttgatactgaagaacccttggaagaaggagactccaccgttatgatctctgaagttcttgatctgttgagccaaaggtgggagaggatcaacggtgcac aagccctcaagcttttgcctagagaaactaaactccatgtaaatgttttgaatctgacttatacttatcccataactacttactagcattttattgaagc tcacctattctattatccaattcctacagaacctgcttccgtttcttgcaccccttctaagaaattcaagtgaagctcacagaaacttttcagtcatcaa gagtttgaggcagagtgaaaacttacaggtatgtttgtgtttctggaactattgacacctagcattaaaagaaacccgtatgtgaaattgatgatgtgaa acgaataggtgaaagaggaactatacaaacataggaaaggagtagcgcaagtaacaagcgaaagcatgtgctcattgtgcaacaagaagatagggacaag cgtatttgctgtttatcccaacgggaaaacgttagttcactttgtatgcttcagagattctcaaggcatgaaagctgtttctaagacaacacatggaaga agacgatgaggtaatcatcaattactgtaacaaagagaggtttaagacactaaaccatcttttcttttttacaaaactcccaaagtgcaattaaagaaaa agctcctttcgtgttgtttgtctgtttatagagagagatttggagctacttttttggtgttttcttctgtggttttttgtgtttggttcaaaatgatggt cttgactcttgacaaaaccagtttggctcttgttgtaaaatctgttagtttatataaagacttttcatttttgtgtaattgggacttgtcgaagaaaata acgaatgttagtgcgaaatctaacaacattcaaccaaatgaaggtgatatgatgggccaagaaacgtgggctggattaggcgttatcaggcttcaacagc tcagttagattataataagattagaagtcacgtgagtgaagagacatgacatgtaatgtgaaattacgaagtcgaacactttgcgtcttggggtaatcgt tagggttaggtttcgtgttctacgaagcaaagagcataagagacagagaggcatcttttgggaaagcggtggtcgccgtatctcaattgaaccaaaaatt aaccaatctcaagaccgatccgattctctttgttccctctctctctgggtctcttggtgttcttttaatcttttttactctttcccgtttcacgcatttt gt
Border_1 (120531_LB2)
GCCTTTTCAGAAATGGATAAATAGCCTTGCTTCCTATTATATCTTCCCAAATTACCAATACATTWCACTWGCATCTGAATTTCATAACCAATCTCGATAC
ACCAAATCGAATTCAATTCGGCGTTAATTCAGTACATTAAAAACGTCCGCAATGTGTTATTAAGTTGTCTAAGCGTCAATTTGTTTACACCACAATATAT
CCTGACAATCTAATGCTTATATCCACGTCGGCTAGCAACTCTCTCGAAGCCAAAACCTCCATCGCCACAATCGGTTTCTTAGAGAATCCAGCTACCGTCT
TCTCTAGCACGTAAGTCTCTTGATGCAGCTCCGACGGATCGGAGGCAGAAGATTCCGGTGGAGAGTAAATGCGGAGAGAACCGTCATAACATCCAGCGAA
GAGCTTGGAGCCGTAGGATTCAACAGCATCGATCCTAGCGGGACAATCTTTGAGAAGCTGAAACGAATCATAAGCGTTGTGAACCATATCTTCGATCGAT
TTCTGGGTTCTTCTTCTGGGAATCACCAAAGATTCATCATGTTCAAAATCCAATTACAACAGAGATGATTGATTTTTTATTTTTTTCACAACGTGCGTTG
ATAAATTATGAAAAAAAAGGAAAAAATCGTAAAATTTAAAAATTTAAATGAATTAAGGACAAATGGTCCCGGCGGGGCTCGAACCCGCGACCTTCGGCTC
ATAAGACCAACGCTCTAACCAACTGAGCTACGGGACCTTTTGTTCTCTTTAAGTTCAATATTATATTTAAAGGTTAATATTATATTTAAAGTCTAAGATT
TGATCATCACCTCACTAGACGACAATAACTTCTCTGATTT
| Start of BLAST Alignment: | NT 254 / Exon 1 of 7 |
| First 15 bp Perfect Match: | NT 254 / Exon 1 of 7 |
BLAST Details: Query Sequence: 120531_LB2 Length: (840 letters) Database: Genes from AGI, Total Genome (DNA); Smallest Sum High Probability Sequences producing High-scoring Segment Pairs: Score P(N) N At4g36630 68417.t04776 expressed protein 1658 2.1e-69 1 At2g36145 68415.t04095 expressed protein 198 0.74 1 At4g26380 68417.t03529 DC1 domain-containing protein cont... 198 0.85 1 AtCg00230 trnD tRNA-Asp 150 0.993 1 >At4g36630 68417.t04776 expressed protein Length = 4790 Minus Strand HSPs: Score = 1658 (254.8 bits), Expect = 2.1e-69, P = 2.1e-69 Identities = 336/340 (98%), Positives = 336/340 (98%), Strand = Minus / Plus Query: 572 TCAATCATCTCTGTTGTAATTGGATTTTG-AACATGATGAATCTTTGGTGATTCCCAGAA 514 ||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||| Sbjct: 8 TCAATCATCTCTGTTGTAATTGGATTTTGTAACATGATGAATGCGTGGTGATTCCCAGAA 67 Query: 513 GAAGAACCCAGAAATCGATCGAAGATATGGTTCACAACGCTTATGATTCGTTTCAGCTTC 454 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 68 GAAGAACCCAGAAATCGATCGAAGATATGGTTCACAACGCTTATGATTCGTTTCAGCTTC 127 Query: 453 TCAAAGATTGTCCCGCTAGGATCGATGCTGTTGAATCCTACGGCTCCAAGCTCTTCGCTG 394 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 128 TCAAAGATTGTCCCGCTAGGATCGATGCTGTTGAATCCTACGGCTCCAAGCTCTTCGCTG 187 Query: 393 GATGTTATGACGGTTCTCTCCGCATTTACTCTCCACCGGAATCTTCTGCCTCCGATCCGT 334 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 188 GATGTTATGACGGTTCTCTCCGCATTTACTCTCCACCGGAATCTTCTGCCTCCGATCCGT 247 Query: 333 CGGAGCTGCATCAAGAGACTTACGTGCTAGAGAAGACGGTAGCTGGATTCTCTAAGAAAC 274 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 248 CGGAGCTGCATCAAGAGACTTACGTGCTAGAGAAGACGGTAGCTGGATTCTCTAAGAAAC 307 Query: 273 CGATTGTGGCGATGGAGGTTTTGGCTTCGAGAGAGTTGCT 234 |||||||||||||||||||||||||||||||||||||||| Sbjct: 308 CGATTGTGGCGATGGAGGTTTTGGCTTCGAGAGAGTTGCT 347 >At2g36145 68415.t04095 expressed protein Length = 966 Minus Strand HSPs: Score = 198 (35.8 bits), Expect = 1.3, P = 0.74 Identities = 84/129 (65%), Positives = 84/129 (65%), Strand = Minus / Plus
Border_2 (120531_LB1)
GCCTTTTCAGAAATGGATAAATAGCCTTGCTTCCTATTATATCTTCCCAAATTACCAATACATTACACTAGCATCTGAATTTCATAACCAATCTCGATAC
ACCAAATCGAATTCAATTCGGCGTTAATTCAGTACATTAAAAACGTCCGCAATGTGTTATTAAGTTGTCTAAGCGTCAATTTGTCCGCAATGTGTTATTG
TTTATATGTGATTACTAAAGCTAAAGGTGCTAATGCTTATTCTTGGGATGATCGGCGTGGGTTCTTGTGTTTCTCTAGGCAAAAGAGAGTCTGTGTTTTC
AAGCACGATGGTAAAAATCTCTGAAACTCAACTTTGAATCATGAGGATTGGATTTTGATGAAATGTTGTTTCTGTTGATTTTTTAGGAGGAGGAGGATTT
GTAGAGGTCAGAGACTATGGAGTTCCTGATACTGTCAAGTCTATTTCTTGGTGTGGAGAAAACATCTGTTTAGGCATTAAGAAAGAGTATGTGATACTTA
ATACTGCTAATGGGACTCTCTCTGAGGTGTTTCCTTCTGGTAGGGTTGCTCCTCCTCTCGTGATATCTCTACCTTCTGGTGAACTTATTTTGGGAAAGGT
AGTTATGCTTTTCCTTTTTCCCCCATTCAATGTATTTGTTCGGTTTTGAAATGTTGTCTTCATTAGTTTCTTCTTGTACATGTAGGAGAACATTGGAGTT
TTTGTTGATCAAAATGGGAAGCTCCTTCAAACAGAGAGAATCTGTTGGTCAGAGGCCCCAACGTCTATTGTCATTCAAAACCCTTATGCGATAGCCTTGN
CTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
| Start of BLAST Alignment: | NT 311 / Exon 1 of 7 |
| First 15 bp Perfect Match: | NT 311 / Exon 1 of 7 |
BLAST Details: Query Sequence: 120531_LB1 Length: (840 letters) Database: Genes from AGI, Total Genome (DNA); Smallest Sum High Probability Sequences producing High-scoring Segment Pairs: Score P(N) N At4g36630 68417.t04776 expressed protein 2965 6.8e-130 1 At1g64060 68414.t06643 respiratory burst oxidase protein ... 213 0.33 1 At5g56790 68418.t06579 protein kinase family protein cont... 194 0.95 1 At5g47310 68418.t05425 expressed protein 190 0.99 1 >At4g36630 68417.t04776 expressed protein Length = 4790 Plus Strand HSPs: Score = 2965 (450.9 bits), Expect = 6.8e-130, P = 6.8e-130 Identities = 593/593 (100%), Positives = 593/593 (100%), Strand = Plus / Plus Query: 207 TGTGATTACTAAAGCTAAAGGTGCTAATGCTTATTCTTGGGATGATCGGCGTGGGTTCTT 266 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 405 TGTGATTACTAAAGCTAAAGGTGCTAATGCTTATTCTTGGGATGATCGGCGTGGGTTCTT 464 Query: 267 GTGTTTCTCTAGGCAAAAGAGAGTCTGTGTTTTCAAGCACGATGGTAAAAATCTCTGAAA 326 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 465 GTGTTTCTCTAGGCAAAAGAGAGTCTGTGTTTTCAAGCACGATGGTAAAAATCTCTGAAA 524 Query: 327 CTCAACTTTGAATCATGAGGATTGGATTTTGATGAAATGTTGTTTCTGTTGATTTTTTAG 386 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 525 CTCAACTTTGAATCATGAGGATTGGATTTTGATGAAATGTTGTTTCTGTTGATTTTTTAG 584 Query: 387 GAGGAGGAGGATTTGTAGAGGTCAGAGACTATGGAGTTCCTGATACTGTCAAGTCTATTT 446 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 585 GAGGAGGAGGATTTGTAGAGGTCAGAGACTATGGAGTTCCTGATACTGTCAAGTCTATTT 644 Query: 447 CTTGGTGTGGAGAAAACATCTGTTTAGGCATTAAGAAAGAGTATGTGATACTTAATACTG 506 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 645 CTTGGTGTGGAGAAAACATCTGTTTAGGCATTAAGAAAGAGTATGTGATACTTAATACTG 704 Query: 507 CTAATGGGACTCTCTCTGAGGTGTTTCCTTCTGGTAGGGTTGCTCCTCCTCTCGTGATAT 566 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 705 CTAATGGGACTCTCTCTGAGGTGTTTCCTTCTGGTAGGGTTGCTCCTCCTCTCGTGATAT 764 Query: 567 CTCTACCTTCTGGTGAACTTATTTTGGGAAAGGTAGTTATGCTTTTCCTTTTTCCCCCAT 626 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 765 CTCTACCTTCTGGTGAACTTATTTTGGGAAAGGTAGTTATGCTTTTCCTTTTTCCCCCAT 824 Query: 627 TCAATGTATTTGTTCGGTTTTGAAATGTTGTCTTCATTAGTTTCTTCTTGTACATGTAGG 686 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 825 TCAATGTATTTGTTCGGTTTTGAAATGTTGTCTTCATTAGTTTCTTCTTGTACATGTAGG 884 Query: 687 AGAACATTGGAGTTTTTGTTGATCAAAATGGGAAGCTCCTTCAAACAGAGAGAATCTGTT 746 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 885 AGAACATTGGAGTTTTTGTTGATCAAAATGGGAAGCTCCTTCAAACAGAGAGAATCTGTT 944 Query: 747 GGTCAGAGGCCCCAACGTCTATTGTCATTCAAAACCCTTATGCGATAGCCTTG 799 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 945 GGTCAGAGGCCCCAACGTCTATTGTCATTCAAAACCCTTATGCGATAGCCTTG 997 >At1g64060 68414.t06643 respiratory burst oxidase protein F (RbohF) (RbohAp108) / NADPH oxidase identical to cytochrome b245 beta chain homolog RbohAp108 [GI:2654868], respiratory burst oxidase protein F [gi:3242456], from Arabidopsis thaliana Length = 7158 Plus Strand HSPs: Score = 213 (38.0 bits), Expect = 0.40, P = 0.33 Identities = 127/204 (62%), Positives = 127/204 (62%), Strand = Plus / Plus