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At3g54660 SYNGENTA 125807

Genomic Sequence (from TAIR)
acatacgttgataacacaaatcgtataactttctaacggtacagaaaatagtaaaccgtacaaaaataataaaaaagggtaagatgtagaagtataaaac
taatagtacaaattaaaagattttggttccacttgtatgtataagtgattacatcaaaatggtattactaagtcatcatttagatttgatgaagtttgta
ttcgtgtcataaaccgggcgtaggtggagttattgtcagtttggtagcgttttacgaccacacataaaaacatgtttataaattgttaaaaaacaataag
acatgtcataaatctaaatgccacaagtagaattatcgaaataaagcttttacataaatacacacacccaaactaaaaaagaaaaaaaaaagaaagagag
agagagaagaagaatcgtggagATGGCTTCGACCCCGAAGCTTACCAGTACAATTTCATCATCTTCTCCATCTCTTCAATTCCTCTGCAAAAAACTCC
CAATCGCAATTCATCTACCATCATCTTCTTCCTCTAGCTTTCTCTCGCTTCCTAAAACCCTAACCTCTCTCTATTCTCTCCGTCCCCGTATCGCCCTACT
CTCAAACCACCGCTATTACCACTCTCGCCGGTTTTCTGTTTGTGCCAGTACCGATAATGGAGCTGAATCAGACCGCCACTACGATTTTGATCTCTTCACT
ATCGGTGCCGGAAGCGGCGGCGTCCGCGCCTCTCGCTTCGCCACTAGCTTCGGTGCATCCGCCGCCGTTTGCGAGCTTCCTTTTTCCACTATCTCTTCCG
ATACTGCTGGAGGCGTTGGAGGAACgtaagatttcttccttcttgtggcttatatcgatagctagtgaatttgactttagtagtagctataccagaattt
gaagcatttgcttgatgatttatggtttgattgtgttgtctactcatttttggttattttgcagGTGTGTATTGAGAGGATGTGTACCAAAGAAGTTACT
TGTGTATGCATCCAAATACAGTCATGAGTTTGAAGACAGTCATGGATTTGGTTGGAAGTATGAGACTGAGCCTTCTCATGATTGGACTACTTTGATTGCT
AACAAGAATGCTGAGTTACAGCGGTTGACTGGTATTTATAAGAATATACTGAGCAAAGCTAATGTCAAGTTGATTGAAGGTCGTGGAAAGgtatgccgag
gctcggtgtttatatagttcatgagttaacctctatgtattgatttgagcttgagtatgtattttatatgtgtagGTTATAGACCCACACACTGTTGATG
TAGATGGGAAAATCTATACTACGAGGAATATTCTGATTGCAGTTGGTGGACGTCCTTTCATTCCTGACATTCCAGGAAAAGAGTTTGCTATTGATTCTGA
TGCCGCGCTTGATTTGCCTTCCAAGCCTAAGAAAATTGCAATAGTTGGTGGTGGCTACATAGCCCTGGAGTTTGCGGGGATCTTCAATGGTCTTAACTGT
GAAGTTCATGTATTTATAAGGCAAAAGAAGGTGCTGAGGGGATTTGATGAAGATgtaagtaaaaaattgagaatgacttttgctgctttcatttatccgt
ctggatattttctaattgtaattgttattcttgtttcagGTCAGGGATTTCGTTGGAGAGCAGATGTCTTTAAGAGGTATTGAGTTTCACACTGAAGAAT
CCCCTGAAGCCATCATCAAAGCTGGAGATGGCTCGTTCTCTCTGAAGACCAGCAAGGGAACTGTTGAGGGATTTTCGCATGTTATGTTTGCAACTGGTCG
CAAGCCCAACACAAAGgtatagtgtgatttttattattttccaaaggatgtttataaaatgaaaactggtagcaaagttcatcctttaataatttgtcta
agataaactgaccactgctgccccttgtttatgactttaatggaatatgattgttcattgatgtaatgttggctgttataacagAACTTAGGGTTGGAGA
ATGTTGGCGTTAAAATGGCGAAAAATGGAGCAATAGAGgtatgatccagtgttttacctagtttttttgtcacttaggatttctattattgcattgtgca
cagttctcttgttatacctggttacttcttgtgattgtgctccatgtttccactttttttttgtaagGTTGACGAATATTCACAGACATCTGTTCCATCC
ATCTGGGCTGTTGGGGATGTTACTGACCGAATCAATTTGACTCCAGTTGCTTTGATGGAGGGAGGTGCATTGGCTAAAACTTTGTTTCAAAATGAGCCAA
CAAAGCCTGATTATAGgtaacataacaatcttaacttttgatgtttaaacctttgggattttttggtgattgatgagagtttttctctgtttagtcttac
atgctgcatcagtgatctataacattttataactgttgtctctgatggcttttatcctttctgtgttctataatcaactagAGCTGTTCCCTGCGCCGTT
TTCTCCCAGCCACCTATTGGAACAGTTGGTCTAACTGAAGAGCAGgtaagtaggatgatttgtcaaaaatatggtttatcatgcatgccactacatagaa
atattaactacgtgtttgcagGCCATAGAACAATATGGTGATGTGGATGTTTACACATCGAACTTTAGGCCATTAAAGGCTACCCTTTCAGGACTTCCAG
ACCGAGTATTTATGAAACTCATTGTCTGTGCAAACACCAATAAAGTTCTCGGTGTTCACATGTGTGGAGAAGATTCACCAGAAATCATCCAGgtttcatt
ttttaacatgattggtattctctgaaaagtaatcacggaaaacatatatgattgaatatgaattttattttacaatttttcagGGATTTGGGGTTGCAGT
TAAAGCTGGTTTAACTAAGGCCGACTTTGATGCTACAGTGGGTGTTCACCCCACAGCAGCTGAGGAGTTTGTCACTATGAGGGCTCCAACCAGGAAATTC
CGCAAAGACTCCTCTGAGgtttgtttgtgaacagtcaaaacttatccatctagttatttctcgtggttttgcaacatgggaaaatgattggaactgagtg
agatgtgtatgtccaatttcatttcagGGAAAGGCAAGTCCTGAAGCTAAAACAGCTGCTGGGGTGTAGagaaggttgcaaaaaagattgtatttacggc
attggagccccctgataaggtattcattcaccagtttccgaagtattggtcctaattcctaaaattagaaaagacatgcaatgcattagctcataccatg
cttaagtaagatgtcaattagggccaaagctttgtttctgcccaccccggaaaaatagggtagactagaattctcctccataacggtgtttgatatttga
cttgcatgtttgcaggagaacattgtgtctgtgaagaagaagcttttcttttggcagagaatattttttcataatgtcgtgtgaagatatgatcgctgtc
ctgcaatacttttgatcgtttgacacacgaccaaattcctcgagagagagaggttgtaactattccgaaagagctctaaaactgaagctttcagttcttg
tgacatcataatgaaggctgtatagatataacagtttcgagttttatttggatttgtagtatttttgttttctattgtgttgaacttgtctctttgaagt
caccacgggagacctcatatcagcatcgttgcgaatcaaatgaggttttgagttttgacaagaaattcaacacgatcaccaaatccttgagtcattatca
tattcagatttcagagtctcctaccataatcatatttatggttcgactgtacattattactgtttaaaattgatttgatttttgaaaagttaaaaactaa
tagttgactaaaaaattcataaacaaatatatactttttaaagagatacgttttgattaataacaaaaaggaaatatatacattaagtattataattaat
atacttatataactaaaaatcactattataagtaacaatatctctaaaactttgaatggccattaaatttttcaaaaatagatagaagaaagaatttttt
taaaaaagatatatccaagagatttccaactatgataaagcaaatatgtcataattatatttattggcttatcgcgacacgatttccagattcttattat
ta

Border_1 (125807_RB)

AGTTAGCTCACTCATTAGGCACCCCAGGCTTTACACTTTATGCTTCCGGCTCGTATGTTGTGTGGAATTGTGAGCGGATAACAATTTCACACAGGAAACA
GCTATGACCATGATTACGCCAAGCTCGAAATTAACCCTCACTAAAGGGAACAAAAGCTGGAGCTCGCTTGAGCTTGGATCAGATTGTCGTTTCCCGCCTT
CAGTTTATGCATGCTAGCATATGCCATGGAAACTATCAGTGTTTGACGCTTTACAACTGTACAATTTTAC:GGTTATACTATACAAC:TGTATAGTGGAA
TTGTGACACACAATTCGGGGTCGAAGCTTACCAGTACAATTTCATCATCTTCTCCATCTCTTCAATTCCTCTGCAAAAAACTCCCAATCGCAATTCATCT
ACCATCATCTTCTTCCTCTAGCTTTCTCTCGCTTCCTAAAACCCTAACCTCTCTCTGTTCTCTCCGTCCCCGTATCGCCCTACTCTCAAACCACCGCTAT
TACCACTCTCGCCGGTTTTCTGTTTGTGCCAGTACCGATAATGGAGCTGAATCAGACCGCCACTACGATTTTGATCTCTTCACTATCGGTGCCGGAAGCG
GCGGCGTCCGCGCCTCTCGCTTCGCCACTAGCTTCGGTGCATCCGCCGCCGTTTGCGAGCTTCCTTTTTCCACTATCTCTTCCGATACTGCTGGGAGGCG
TTGGAGGAACGTAAGATTTCTTCCTTCTTGTGGCTTATATCGATAGCTAGTGAATTTGACTTTAGTAGTAGCTATACCAGAATTTGAAGCATTTGCTTGA
TGATTTATGGTTTGATTGGGGTTGTCTACTCATTTTTTGGGTATTTTGCAAG

Start of BLAST Alignment:NT < 15 / 5’ UTR
First 15 bp Perfect Match:NT 13 / Exon 1 of 10
BLAST Details:
Query Sequence: 125807_RB 
Length: (850 letters) 
Database: Genes from AGI, Total Genome (DNA);
                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

At3g54660 68416.t05607 gluthatione reductase, chloroplast...  2581  2.1e-112  1
At3g24170 68416.t02736 glutathione reductase, putative id...   184  0.023     2
At1g66180 68414.t06888 aspartyl protease family protein c...   222  0.13      1
At3g57400 68416.t05916 expressed protein                       219  0.18      1


>At3g54660 68416.t05607 gluthatione reductase, chloroplast nearly identical to
           SP|P42770 Glutathione reductase, chloroplast precursor (EC 1.8.1.7)
           (GR) (GRASE) {Arabidopsis thaliana};  identical to cDNA glutathione
           reductase GI:451197
        Length = 3438

  Plus Strand HSPs:

 Score = 2581 (393.3 bits), Expect = 2.1e-112, P = 2.1e-112
 Identities = 539/560 (96%), Positives = 539/560 (96%), Strand = Plus / Plus

Query:   292 AGTGGAATTGTGACACACAA-TTCGGGGTCGAAGCTTACCAGTACAATTTCATCATCTTC 350
             ||  |||| |||  | |    ||||    |||||||||||||||||||||||||||||||
Sbjct:    68 AGAAGAATCGTGG-AGATGGCTTCGACCCCGAAGCTTACCAGTACAATTTCATCATCTTC 126

Query:   351 TCCATCTCTTCAATTCCTCTGCAAAAAACTCCCAATCGCAATTCATCTACCATCATCTTC 410
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:   127 TCCATCTCTTCAATTCCTCTGCAAAAAACTCCCAATCGCAATTCATCTACCATCATCTTC 186

Query:   411 TTCCTCTAGCTTTCTCTCGCTTCCTAAAACCCTAACCTCTCTCTGTTCTCTCCGTCCCCG 470
             |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct:   187 TTCCTCTAGCTTTCTCTCGCTTCCTAAAACCCTAACCTCTCTCTATTCTCTCCGTCCCCG 246

Query:   471 TATCGCCCTACTCTCAAACCACCGCTATTACCACTCTCGCCGGTTTTCTGTTTGTGCCAG 530
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:   247 TATCGCCCTACTCTCAAACCACCGCTATTACCACTCTCGCCGGTTTTCTGTTTGTGCCAG 306

Query:   531 TACCGATAATGGAGCTGAATCAGACCGCCACTACGATTTTGATCTCTTCACTATCGGTGC 590
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:   307 TACCGATAATGGAGCTGAATCAGACCGCCACTACGATTTTGATCTCTTCACTATCGGTGC 366

Query:   591 CGGAAGCGGCGGCGTCCGCGCCTCTCGCTTCGCCACTAGCTTCGGTGCATCCGCCGCCGT 650
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:   367 CGGAAGCGGCGGCGTCCGCGCCTCTCGCTTCGCCACTAGCTTCGGTGCATCCGCCGCCGT 426

Query:   651 TTGCGAGCTTCCTTTTTCCACTATCTCTTCCGATACTGCTGGGAGGCGTTGGAGGAACGT 710
             |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct:   427 TTGCGAGCTTCCTTTTTCCACTATCTCTTCCGATACTGCTGG-AGGCGTTGGAGGAACGT 485

Query:   711 AAGATTTCTTCCTTCTTGTGGCTTATATCGATAGCTAGTGAATTTGACTTTAGTAGTAGC 770
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:   486 AAGATTTCTTCCTTCTTGTGGCTTATATCGATAGCTAGTGAATTTGACTTTAGTAGTAGC 545

Query:   771 TATACCAGAATTTGAAGCATTTGCTTGATGATTTATGGTTTGATTGGGGTTGTCTACTCA 830
             |||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||
Sbjct:   546 TATACCAGAATTTGAAGCATTTGCTTGATGATTTATGGTTTGATTGTG-TTGTCTACTCA 604

Query:   831 TTTTTTGGGTATTTTGCAAG 850
             ||||| || ||||||||| |
Sbjct:   605 TTTTT-GGTTATTTTGCAGG 623


>At3g24170 68416.t02736 glutathione reductase, putative identical to GB:P48641
           from [Arabidopsis thaliana]
        Length = 5000

  Plus Strand HSPs:

 Score = 184 (33.7 bits), Expect = 0.024, Sum P(2) = 0.023
 Identities = 92/152 (60%), Positives = 92/152 (60%), Strand = Plus / Plus