At1g63680 SYNGENTA 13763
Genomic Sequence (from TAIR)
cgtagatatagagacactatatcttgcagaaaaataaatttaaaatatcaaaaataaaattaaagatctaacataattgaatatacaaataacaaaatat gagaaaaatactaaatcggaaaagcatttttaaaataatttagtattgtgttttacgttaatattctattaattactatttattaatttataaaataaat taatattattataaattaataaaaatttatagtccaatcattattaatttatagagtttctcctgtacatatcttttaatcgtttttagtacacactgca ccgttttatcggcgtctttgatttctttaaacgcatcgtttgtaacccaaaaatgaaaaaacccaactcttatcccctggaaaaaacctttcactgcttg ctttctcagtctctctgtctccaATGGCGTTCACCTTTCTCTCTCCTCACCCAGTCTTTCTCTCTCTAACTGGAACAACCTCTTCCTTCTCCTACAAACC AGTTCTCTTACCATTCTCTCGAAATTCCCGTACTCTCACGGTTGCGGCGGGACCTGCTCGCCGGAATTCGTACCCGAACCCTGCTGATGACGATCCACCT GAAGCACCGGAGGATTCAATGCACGGAGTTTCGAAGTTTCAGCAGATCCAGCGTCAAGCTGCTCGTGCACGGAAGCTAGAGGAAGAAGATTTCGAGAAGA ATCGGAACACTTATCTCTCCGCTATCGCCGATGTGGAAGACGCGGCGGAGACGGGACGAGATGACGAAGAATCTGGTGGAGACTTGTTCTCTGATATCGA TAGAGCAATCTCCATGAAACGTAGTGAGTTTGTTAAGCAAGGATTGCTCAAACCTAATCCTCCCAAAACGGCATCGCTTAAGAAGATTGGGGAGGAGGGA AATGAGGAAGAAGGTGATGTTACTGACGATGTTGATGAGCTTGATGAAGAAGAAGTTGTTGATTTGGATGAAATTGATAAATTAACTGGATTAACAGAGA TTTCTGATGAAGAAGATTGGGTTGATGAGGAAGGTAACACTAGGATCAACAAGAAGAAGGAGTTTGGGTCTGATCATCAATTTGAATTCGATTTGGATGA TTTTGGTGAATCTAAAGCGAGAATCGTGGAACCTAAGTTCAAAATGTGCTTAGCTGAGCTTTTAGATGAGAGTAAAGTGGTACCAATCTCAGTTTACGGC GATTTAGATGTCGAAATCACCGGGATTCAACATGATTCGCGCGGTGTGAGCGCCGGAGATCTCTTCGTGTGTTGTTTAGGAAGTGAAAATTTCTTGAGTG AAGCAGATAAGAGAGGAGCAGTGGCGGTTGTAGCTAGCAAAGAGATTGATATTGAAGATACTTTAGGTTGCAGAGCACTTGTCATTGTTGAAGATACGAA TGCAGTTTTAGCAGCTTTAGCTTCTTCCTTTTATAGGCATCCCTCGAAGAACATGTCGGTGATTGGAGTTACTGGTACGGATGGGAAAACGACTACTACG TATTTGATTAAGAGCCTCTATGAAGCGATGGGTGTGAGAACAGGAATGTTTAGCACAGTTTCTTGTTATATTCATGGCGATAACAAATTGGATACGCCTA ATGCTACGATGAATCCTGATGCTGTTTTGGTTCAGAGTTTGATGGCTAAGATGTTGCATAATGGAACTGAATCTTTGGTTATGGAAGCTTCTCCTCAAGA ACTTGCTTTAGGGAAATGTGATGAAGTGGATTTCGACATTGCGGTTTTCACAAATTTGACTAGAGAAAATACGGATTTTCGTGGTACTGATGAAGAGTAT AGAGATGCTGAAGCCAAGTTGTTTTCAAGAATGGTTGATCCGGAAAGGCATAGGAAAGTGGTTAACATAGATGATCCAAACGCAGCATTCTTTGTCCAGC AAGGGAATCCTAATGTTCCTGTTGTGACATTTGCCATGGAAAACACCAAAGCCGATGTTCACCCGTTAAAGTTTGAGCTTTCCTTGTTTGAGACACAGGT TTTGGTTAATACCCCTCAAGGTATACTGGAGATCTCTTCGGGTTTGTTAGGACGGCATAACATTTATAATATTCTTGCTGCTGTGGCTGTTGGGATTGCT GTTGGAGCTCCTCTTGAGGATAT◄TGTTAGAGGTGTTGAGGAAGTCGATGC◄AGTCCCAGGAAGGTGTGAGTTGATTGATGAGGAACAAGCTTTTGGTGT TATTGTGGATCATGCAAACACACCTGATGGCTTGTCAAGGCTGCTAGATTCAATTCGAGAGCTTAAACCGAGAAGAATCATTACCGgtatagatattttc ttccatctaatagatactctttgcctgttcggccgttcctatggtctttatatgtgtggtcatctgattattttagttgttttatttatttattgaagTT ATTGGTTGTGAGGGTGAGAATGAAAGAGGGAAAAGACCGCTTATGACGAAAATTGCTACTGAAAAGAGCGATGTGACGATGTTGACATCTGATAATCCGA GGAATGAAGATCCATgtaagtaactctaagaattagattgagtctatctcccttgagtgtttctggaggtatattaacagttaattt►tccaatgtggtt ttagTGGACATCTTGGATGACATGTTGTCTGGGATTGGATGGACGATGCAAGAGTATTTGAAACATGGCGAACACGATTACTATCCGCCTTTGGCAAATG GTCATAGACTCTTCCTTCACGATATTAGACGTGTAGCTGTACGTTGTGCTGTTGCTATGGGTGAAGAAGGTGATATGGTTgtaagtattcaaataaaccc acactctatacagtactttactgagtgtgttatcaaagttgctggatttacctttatgagcaatcaaagtaatatagttctcgggtaaatagctttgctt gacactgatttttgcagGTTGTAGCTGGGAAAGGGCATGAAGCGTATCAGCTTGAAGGTGAAAAGAAAGAGTTTTATGATGACAGAGAGGAATGTCGGGA AGCATTACAATACGTTGATGAGCTTCACCAAGCTGGAATAGACACAAGCGAGTTCCCATGGCGGTAAgtagaaccgtaacagctaaaacaaccaacgata accaaagtttctaatctgtgaagagttgctgaaacttgtcaagatgcttcacgatcactaatctgttcttccttgtattactgtgcttctgcaggttacc agagagtcattaatatctctgtggtgaaatcattagaagagaagttagcttagtccatgaaaccagattttcttccaccatggtccaattctcttgcgaa gatcgatttgcacagaggtaatgaattctacacaagtgacataaaaatcatgcccaaggaaaagagattacaccactgggaggtacttaacgttccaatc accattaccttaaagttattccattgctcacttcacctgtttttttggacaagaggaaacctaagctatcgaaatgtaatattagactaaacttaattca gat
Border_1 (13763_LB)
GCCTTTTCAGAAATGGATAAATAGCCTTGCTTCCTATTATATCTTCCCAAATTACCAATACATTACACTAGCATCTGAATTTCATAACCAATCTCGATAC
ACCAAATCGAATTCAATTCGGCGTTAATTCAGTACATTAAAAACGTCCGCAATGTGTTATTAAGTTGTCTAAGCGTCAATTTGTTTACACCACAATATAT
CCTCAAGAGGAGCTCCAACAGCAATCCCAACAGCCACAGCAGCAAGAATATTATAAATGTTATGCCGTCCTAACAAACCCGAAGAGATCTCCAGTATACC
TTGAGGGGTATTAACCAAAACCTGTGTCTCAAACAAGGAAAGCTCAAACTTTAACGGGTGAACATCGGCTTTGGTGTTTTCCATGGCAAATGTCACAACA
GGAACATTAGGATTCCCTTGCTGGACAAAGAATGCTGCGTTTGGATCATCTATGTTAACCACTTTCCTATGCCTTTCCGGATCAACCATTCTTGAAAACA
ACTTGGCTTCAGCATCTCTATACTCTTCATCAGTACCACGAAAATCCGTATTTTCTCTAGTCAAATTTGTGAAAACCGCAATGTCGAAATCCACTTCATC
ACATTTCCCTAAAGCAAGTTCTTGAGGAGAAGCTTCCATAACCAAAGATTCAGTTCCATTATGCAACATCTTAGCCATCAAACTCTGAACCAAAACAGCA
TCAGGATTCATCGTAGCATTAGGCGTATCCAATTTGTTATCGCCATGAATATAACAAGAAACTGTGCTAAACATTCCTGTTCTCACACCCATCGCTTCAT
AGAGGCTCTTAATCAAATACGTAGTAGTCGTTTTCCCATCCGTACCAGTAACTCCAATCACCGACATGTTCTTCGAGGGATGCCTATAAAAGGAAGAAGC
TAAAGCTGCTAAAACTGCATTCGTATCTTCAACAATGACAAGTGCTCTGCAACCTAAAGTATCTTCAATATCAATCTCTTTGCTAGCTACAACCGCCACT
GCTCCTCTCTTATCTGCTTCACTCAAGAAATTTTCACTTCCTAAACAACACACGAAGAG
| Start of BLAST Alignment: | NT 1727 / Exon 1 of 4 |
| First 15 bp Perfect Match: | NT 1700 / Exon 1 of 4 |
BLAST Details: Query Sequence: 13763_LB Length: (1059 letters) Database: Genes from AGI, Total Genome (DNA); Smallest Sum High Probability Sequences producing High-scoring Segment Pairs: Score P(N) N At1g63680 68414.t06602 Mur ligase family protein contains... 4333 2.0e-191 1 At2g32250 68415.t03653 far-red impaired responsive protei... 211 0.53 1 At3g21450 68416.t02423 protein kinase family protein cont... 199 0.89 1 At2g42400 68415.t04811 expressed protein 195 0.98 1 >At1g63680 68414.t06602 Mur ligase family protein contains Pfam profile: PF01225 Mur ligase family, catalytic domain Length = 2665 Minus Strand HSPs: Score = 4333 (656.2 bits), Expect = 2.0e-191, P = 2.0e-191 Identities = 879/890 (98%), Positives = 879/890 (98%), Strand = Minus / Plus Query: 1059 CTCTTCGTGTGTTGTTTAGGAAGTGAAAATTTCTTGAGTGAAGCAGATAAGAGAGGAGCA 1000 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 862 CTCTTCGTGTGTTGTTTAGGAAGTGAAAATTTCTTGAGTGAAGCAGATAAGAGAGGAGCA 921 Query: 999 GTGGCGGTTGTAGCTAGCAAAGAGATTGATATTGAAGATACTTTAGGTTGCAGAGCACTT 940 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 922 GTGGCGGTTGTAGCTAGCAAAGAGATTGATATTGAAGATACTTTAGGTTGCAGAGCACTT 981 Query: 939 GTCATTGTTGAAGATACGAATGCAGTTTTAGCAGCTTTAGCTTCTTCCTTTTATAGGCAT 880 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 982 GTCATTGTTGAAGATACGAATGCAGTTTTAGCAGCTTTAGCTTCTTCCTTTTATAGGCAT 1041 Query: 879 CCCTCGAAGAACATGTCGGTGATTGGAGTTACTGGTACGGATGGGAAAACGACTACTACG 820 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1042 CCCTCGAAGAACATGTCGGTGATTGGAGTTACTGGTACGGATGGGAAAACGACTACTACG 1101 Query: 819 TATTTGATTAAGAGCCTCTATGAAGCGATGGGTGTGAGAACAGGAATGTTTAGCACAGTT 760 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1102 TATTTGATTAAGAGCCTCTATGAAGCGATGGGTGTGAGAACAGGAATGTTTAGCACAGTT 1161 Query: 759 TCTTGTTATATTCATGGCGATAACAAATTGGATACGCCTAATGCTACGATGAATCCTGAT 700 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1162 TCTTGTTATATTCATGGCGATAACAAATTGGATACGCCTAATGCTACGATGAATCCTGAT 1221 Query: 699 GCTGTTTTGGTTCAGAGTTTGATGGCTAAGATGTTGCATAATGGAACTGAATCTTTGGTT 640 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1222 GCTGTTTTGGTTCAGAGTTTGATGGCTAAGATGTTGCATAATGGAACTGAATCTTTGGTT 1281 Query: 639 ATGGAAGCTTCTCCTCAAGAACTTGCTTTAGGGAAATGTGATGAAGTGGATTTCGACATT 580 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1282 ATGGAAGCTTCTCCTCAAGAACTTGCTTTAGGGAAATGTGATGAAGTGGATTTCGACATT 1341 Query: 579 GCGGTTTTCACAAATTTGACTAGAGAAAATACGGATTTTCGTGGTACTGATGAAGAGTAT 520 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1342 GCGGTTTTCACAAATTTGACTAGAGAAAATACGGATTTTCGTGGTACTGATGAAGAGTAT 1401 Query: 519 AGAGATGCTGAAGCCAAGTTGTTTTCAAGAATGGTTGATCCGGAAAGGCATAGGAAAGTG 460 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1402 AGAGATGCTGAAGCCAAGTTGTTTTCAAGAATGGTTGATCCGGAAAGGCATAGGAAAGTG 1461 Query: 459 GTTAACATAGATGATCCAAACGCAGCATTCTTTGTCCAGCAAGGGAATCCTAATGTTCCT 400 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1462 GTTAACATAGATGATCCAAACGCAGCATTCTTTGTCCAGCAAGGGAATCCTAATGTTCCT 1521 Query: 399 GTTGTGACATTTGCCATGGAAAACACCAAAGCCGATGTTCACCCGTTAAAGTTTGAGCTT 340 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1522 GTTGTGACATTTGCCATGGAAAACACCAAAGCCGATGTTCACCCGTTAAAGTTTGAGCTT 1581 Query: 339 TCCTTGTTTGAGACACAGGTTTTGGTTAATACCCCTCAAGGTATACTGGAGATCTCTTCG 280 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1582 TCCTTGTTTGAGACACAGGTTTTGGTTAATACCCCTCAAGGTATACTGGAGATCTCTTCG 1641 Query: 279 GGTTTGTTAGGACGGCATAACATTTATAATATTCTTGCTGCTGTGGCTGTTGGGATTGCT 220 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1642 GGTTTGTTAGGACGGCATAACATTTATAATATTCTTGCTGCTGTGGCTGTTGGGATTGCT 1701 Query: 219 GTTGGAGCTCCTCTTGAGGATATA-TT-GTGGTGTAAACAAATT-GACGC 173 ||||||||||||||||||||||| || | ||||| | || | || || Sbjct: 1702 GTTGGAGCTCCTCTTGAGGATATTGTTAGAGGTGTTGAGGAAGTCGATGC 1751 >At2g32250 68415.t03653 far-red impaired responsive protein, putative similar to far-red impaired response protein FAR1 [Arabidopsis thaliana] gi|5764395|gb|AAD51282; contains Pfam:PF03101 domain: FAR1 family Length = 3855 Minus Strand HSPs: Score = 211 (37.7 bits), Expect = 0.76, P = 0.53 Identities = 273/497 (54%), Positives = 273/497 (54%), Strand = Minus / Plus
Border_2 (13763_RB)
TCCAATGTGGTTTTAGTGGACATCTTGGATGACATGTTGTCTGGGATTGGATGGACGATGCAAGAGTATTTGAAACATGGCGAACACGATTACTATCCGC
CTTTGGCAAATGGTCATAGACTCTTCCTTCACGATATTAGACGTGTAGCTGTACGTTGTGCTGTTGCTATGGGTGAAGAAGGTGATATGGTTGTAAGTAT
TCAAATAAACCCACACTCTATACAGTACTTTACTGAGTGTGTTATCAAAGTTGCTGGATTTACCTTTATGAGCAATCAAAGTAATATAGTTCTCGGGTAA
ATAGCTTTGCTTGACACTGATTTTTGCAGGTTGTAGCTGGGAAAGGGCATGAAGCGTATCAGCTTGAAGGTGAAAAGAAAGAGTTTTATGATGACAGAGA
GGAATGTCGGGAAGCATTACAATACGTTGATGAGCTTCACCAAGCTGGAATAGACACAAGCGAGTTCCCATGGCGGTAAGTAGAACCGTAACAGCTAAAA
CAACCAACGATAACCAAAGTTTCTAATCTGTGAAGAGTTGCTGAAACTTGTCAAGATGCTTCACGATCACTAATCTGTTCTTCCTTGTATTACTGTGCTT
CTGCAGGTTACCAGAGAGTCATTAATATCTCTGTGGTGAAATCATTAGAAGAGAAGTTAGCTTAGTCCATGAAACCAGATTTTCTTCCACCATGGTCCAA
TTCTCTTGCGAAGATCGATTTGCACAGAGGTAATGAATTCTACACAAGTGACATAAAAATCATGCCCAAGGAAAAGA
| Start of BLAST Alignment: | NT 2162 / Intron 2 of 3 |
| First 15 bp Perfect Match: | NT 2162 / Intron 2 of 3 |
BLAST Details: Query Sequence: 13763_RB Length: (777 letters) Database: Genes from AGI, Total Genome (DNA); Smallest Sum High Probability Sequences producing High-scoring Segment Pairs: Score P(N) N At1g63680 68414.t06602 Mur ligase family protein contains... 2395 6.8e-104 1 At2g22610 68415.t02519 kinesin motor protein-related 192 0.97 1 At5g43840 68418.t04993 heat shock transcription factor fa... 185 0.995 1 At2g48160 68415.t05493 PWWP domain-containing protein 185 0.9996 1 >At1g63680 68414.t06602 Mur ligase family protein contains Pfam profile: PF01225 Mur ligase family, catalytic domain Length = 2665 Plus Strand HSPs: Score = 2395 (365.4 bits), Expect = 6.8e-104, P = 6.8e-104 Identities = 479/479 (100%), Positives = 479/479 (100%), Strand = Plus / Plus Query: 1 TCCAATGTGGTTTTAGTGGACATCTTGGATGACATGTTGTCTGGGATTGGATGGACGATG 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2187 TCCAATGTGGTTTTAGTGGACATCTTGGATGACATGTTGTCTGGGATTGGATGGACGATG 2246 Query: 61 CAAGAGTATTTGAAACATGGCGAACACGATTACTATCCGCCTTTGGCAAATGGTCATAGA 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2247 CAAGAGTATTTGAAACATGGCGAACACGATTACTATCCGCCTTTGGCAAATGGTCATAGA 2306 Query: 121 CTCTTCCTTCACGATATTAGACGTGTAGCTGTACGTTGTGCTGTTGCTATGGGTGAAGAA 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2307 CTCTTCCTTCACGATATTAGACGTGTAGCTGTACGTTGTGCTGTTGCTATGGGTGAAGAA 2366 Query: 181 GGTGATATGGTTGTAAGTATTCAAATAAACCCACACTCTATACAGTACTTTACTGAGTGT 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2367 GGTGATATGGTTGTAAGTATTCAAATAAACCCACACTCTATACAGTACTTTACTGAGTGT 2426 Query: 241 GTTATCAAAGTTGCTGGATTTACCTTTATGAGCAATCAAAGTAATATAGTTCTCGGGTAA 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2427 GTTATCAAAGTTGCTGGATTTACCTTTATGAGCAATCAAAGTAATATAGTTCTCGGGTAA 2486 Query: 301 ATAGCTTTGCTTGACACTGATTTTTGCAGGTTGTAGCTGGGAAAGGGCATGAAGCGTATC 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2487 ATAGCTTTGCTTGACACTGATTTTTGCAGGTTGTAGCTGGGAAAGGGCATGAAGCGTATC 2546 Query: 361 AGCTTGAAGGTGAAAAGAAAGAGTTTTATGATGACAGAGAGGAATGTCGGGAAGCATTAC 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2547 AGCTTGAAGGTGAAAAGAAAGAGTTTTATGATGACAGAGAGGAATGTCGGGAAGCATTAC 2606 Query: 421 AATACGTTGATGAGCTTCACCAAGCTGGAATAGACACAAGCGAGTTCCCATGGCGGTAA 479 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2607 AATACGTTGATGAGCTTCACCAAGCTGGAATAGACACAAGCGAGTTCCCATGGCGGTAA 2665 >At2g22610 68415.t02519 kinesin motor protein-related Length = 5198 Plus Strand HSPs: Score = 192 (34.9 bits), Expect = 3.6, P = 0.97 Identities = 134/219 (61%), Positives = 134/219 (61%), Strand = Plus / Plus