At1g55350 SYNGENTA 16696
Genomic Sequence (from TAIR)
ttcacacattcaaagggtagggttttaatcttaccttctctctctatccatttcccaaaacctgagaaacaaatttctctgagatttattcaaaaaaaaa tcaacattttgcagaaagcaaaagcaagaaaaccctaaaaggaagctaatttgtgtttcacaagctcttcagagtgtgagccctatctttctgttttctc tactttacagcttgattcttctgattttaaaccctagtgaaccaaatctgtatccaagatgtctcattttgcttgaaggctgctaaagtttcgattttta agcgatccctttctgcttcgatgccactgcacagtaagctcatttcggtcaagtaggtaaggtttctaaacttaagctgggttttgtgaaatttaggttt ggtttttgtgttcttggttggttttaagctgcggatttgatgatttgtgcgcaagcttggggtttcagcttttttttttgtgatggaattttgatttccg agttgcatggtgttgtaggtgggagaagaagccATGGAAGGGGATGAGCGAGGAGTCTTACTTGCTTGTGTAATTTCGGGTACCCTTTTCACGGTTTTCG GTTCGGGTTCGTTTTGGATACTTTGGGCTGTTAATTGGCGGCCATGGCGTCTCTACAGgtaaacaagtccattcatatgtttgggcagctctaggtgttg ttttgtcatatatggcgcttgatagagttgctttgtatgagtagtattgacatagaaccatagttagtgaatgattttggaatgtgttctatttttgcag TTGGATCTTTGCTAGAAAATGGCCAAAAGTATTGCAAGGTCCTCAGCTTGATATACTATGTGGTGTTCTATCTCTTTTTGCTTGGATTGTGGTAGTATCC CCTATTGCAATCTTGATAGGATGGGGTTCTTGGCTGATTGTGATATTGGATCGACATATCATTGGGCTGGCGATAATAATGGCTGGAACAGCCCTTTTAC TGGCATTCTACTCAATCATGCTTTGGTGGAGGACCCAGTGGCAAAGCTCAAgtatgtttaccatctactctttctgacttaattcacaacattcttctgg tgttatattcttgataatagtggtggcacgtagtgttagtgtatgaagtatccgatgtaggaatgggaacaaagcagaacatacctgacacatcactact tattgtgaatgaactattgaacttctttcttacattctcgtttgaacaaacagGAGCTGTCGCTTTACTTCTCCTTCTTGGTGTTGCCTTACTATGTGCG TATGAACTCTGTGCTGTCTATGTTACGGCTGGTGCGCATGCATCTCAGCAATATTCTCCTTCTGGTTTCTTTTTCGGTGTATCAGCAATCGCGTTGGCAA TTAACATGCTATTTATCTGCCGCATGGTCTTTAATGgtaaagtttacccagtccttaatcaacatgcaattgctgtgtattcaactttatcagtctactt aattctttgtattagctcaaagcaaatcttccgtatctattaacatgcatactttttaacctccaacctcaatttaagttgttgaaactttgcgaaattt tccatcaccgcagGAAATGGTTTAGATGTGGACGAATATGTAAGGAGGGCATATAAATTTGCTTATTCAGATTGTATAGAAGTGGGTCCTGTGGCTTGTT TGCCTGAACCTCCTGATCCTAATGAATTATATCCCCGGCAAACCAGCAGgtaagttcttgttgctctctacctagaaattcaataatattttggcatagc tggcctcttatgttatgattgttcctgaattttgcaatcaacaaactattgaatacttggaaccaacctaaatctgaacaggattcagggctagtaatct tgccgtttctctctagcttttttttttttcgcccaacaggtggtgtggatggtgttatgatttgtttatactgagcgctgaaatgttctcattcatattt ttatcaatcagctataatcttttttcttgcatatatgtagGGCTTCACATCTTGGCCTTCTGTACCTGGGCTCACTCGTAGTTCTCCTTGCCTACTCAGT CCTATATGGTCTCACAGCTAGGGAATCACGTTGGCTTGGAGGAATCACATCAGCTGCAGTTATTGTTCTTGgtaaaaagataaaaattatttacttatat ttaaagttgaa◄gcaggctacttgattattcctcaactcatcttcatgcttaatattttcat◄gtagACTGGAAT►AT►TGGGGCATGCTTGTATGGGTT TAAGCTTCTTCAGAATCGTGTTCTGGCACTTTTTGTTGCTGGCATATCCCGTCTTTTCCTAATATGTTTTGGCATACACTACTGgtttgtttctgagcta aaaagcttgttacttatctatagatctaaagtttgtccccttcatggcatgtaagatattatccgttctgttgttgcagGTACCTAGGGCATTGTATTAG TTACATTTTCGTAGCATCAGTTCTATCAGGTGCTGCTGTTTCTCGGCATCTATCTATAACAGACCCATCAGCTGCAAGAAGAGATGCCTTACAGAGCACA GTGATCCGCTTGAGAGAAGGTTTTCGGAGAAAAGAGCAGAATAGTTCTTCAAGTTCTTCAGATGGTTGTGGCTCAAGTATAAAAAGAAGTAGTAGTATCG ATGCTGGCCATACTGGTTGTACTAATGAAGCAAATCGTACGGCAGAATCTTGCACGGCTGACAATCTAACTCGAACAGGCAGCTCTCAGGAGGGAATCAA TAGCGACAAAAGCGAAGAAAGTGGAAGACCAAGCTTAGGTTTACGTAGTAGTTCATGTCGTTCTGTGGTCCAAGAGCCCGAAGCAGGAACGTCTTATTTT ATGGACAAAGTTTCTGATCAAAATAACACTCTTGTTGTTTGTTCGAGCAGTGGTCTAGATAGCCAAGGTTACGAGTCTAGCACATCGAATTCTGCAAACC AGCAGCTTTTGGATATGAATTTGGCTCTTGCTTTCCAGGACCAGTTAAACAATCCTAGGATAGCCTCGATACTTAAGAAGAAAGCAAAAGAAGGTGATCT TGAACTGACTAATTTGCTGCAAGACAAGGGGTTGGACCCTAACTTTGCTGTAATGTTGAAGGAAAAAAACTTGGATCCTACTATATTGGCACTACTTCAG AGGAGTAGTTTGGATGCAGATAGAGATCACCGCGACAATACTGATATTACAATCATTGACTCAAACAGTGTTGACAATACTTTGCCAAATCAGATTTCTT TATCCGAAGAATTGAGACTCCGTGGACTAGAGAAGTGGCTTAAGTTGTCTAGACTTCTTCTGCACCATGTAGCGGGGACACCAGAGAGAGCATGGGGCCT CTTTAGTCTTGTCTTTATCCTTGAAACAATCATTGTGGCCATTTTTCGCCCAAAGACCATCACGATTATAAATTCTAGTCATCAACAGgtgagttccacc ctctgatttattgtctctgtggaaaaaattttgggtcttgttttggcttcaaattactgccagtttactcaaattgatccttgtagtttaaatgaaggtt attcgtacctttgctaactcacttgttatctaattgtagTTCGAATTTGGTTTCTCTGTGCTGCTATTGTCACCTGTTGTCTGTTCAATAATGGCTTTTC TTCGGTCTCTTCAAGTTGAGGAAATGGCCTTGACATCAAAATCTCGCAAGgtatggctcgtctctttggtttagtatgttcattagtacttgttgtggac aatgcatataccctgtgatgttttaattgttctaaattatgttatgtttctatgttttcagTATGGCTTTGTTGCCTGGCTTCTGAGCACATCAGTTGGA TTGTCACTCTCGTTCTTGAGgtactacgatttttttatcttcattggacagctaccaacttttcgcacaatggtcacaggattatgtcattcattggaca gctaccaacttttctcacttggtcatttttatgttctcattacaaacatcatgcatgcttcaattttgcagTAAATCGTCAGTACTTCTGGGAATATCCT TGACTGTGCCCCTCATGGCAGCATGCCTGTCTATTGCTGTTCCCATATGGATGCATAATGGGTACCAATTTTGGGTTCCACAGTTATCATGTGGTGACCA GGCAAGAGATTTACGATCTCCCAGGATAAAGgtctgtgtgttttccctgacctggttgcaagtatctctctttgtcaattaaatatctctaactaaactt tctttccattttagGGGTTTATTCTTTGGATTTGTGTTGTGTTGTTTGCGGGTTCTGTAATTTCTCTTGGTGCGATTATATCTGCTAAACCTTTGGATGA TTTAAAGTATAAGCTGTTTAGTGCCAGAGAAAACAACGTCACGTCACCATATACATCTTCTGTATACCTTGGTTGGGCAATGTCATCTGGAATTGCTTTA GTAGTTACCGCCATTCTACCAATAGTTTCATGGTTTGCAACTTATAGGTTTTCCCACTCTTCTGCTGTCTGTCTCATGATATTCTCAGgtaatttgtgtt tctgttagtttgctcacatttggttgggatttttttccttctcgaagtgatccttatatttcttttcctctactttctagTTGTTCTCGTGGCATTTTGT GGAACTTCATATTTGGAAGTTGTAAAATCTAGAGATGATCAGTTGCCCACAAAGGGTGATTTCCTTGCGGCCTTGCTTCCACTTGCATGCATTCCGGCGC TGCTTTCACTATGCTGTGGGATGGTTAAATGgtggatgactatttcctcacgttgcctattaaatcttactctcagtttcaatgagatcgtccttttaaa tgttttgtggttgttctttgcagGAAGGACGATTGTTGGATACTCTCTCGAGGTGTATATGTTTTCTTTTCAATAGGTCTTCTTCTTCTTTTTGGTGCGA TAGCAGCTGTCATTGCAGTCAAACCATGGACGgtaaatgcaaattgcttacataattctcaaagtttttggcttacttttctcaatctgatacatctttg tgtttcaataataacagATAGGCGTATCTTTTCTCTTAGTTCTTTTCCTTATGGTGGTAACAATTGGTGTAATCCATCTTTGGGCGTCAAACAATTTCTA TTTAACCAGGAAACAGACATCCTTTGTCTGCTTTCTTGCTCTTCTTTTGGGTTTGGCCGCATTCCTTCTCGGATGGCATCAAGgtgaggattgcccatat cttattttaaactcttcgtagaggtgagacctactctagtgacacagcaatttcataatttttttgcagATAAAGCATTTGCTGGAGCATCTGTTGGTTA CTTTACATTCCTGTCTCTGTTGGCTGGAAGAGCATTAGCTgtgagttcaacagaactgtggctttttctgtttctgtattcaaccggaatattaacgatt attctcgtagGTTCTTCTATCCCCACCAATTGTAGTATATTCTCCAAGGGTGCTACCAGTATATGTCTACGATGCTCATGCTGATTGCGGAAAGAATGTC AGgtatgcagccacttgagtacccctaatagtattgcatctgctgatctgaaatgaccataaaggattaagctgatcgactctcatatgcttttctattg attgcattgggatttctctagTGCTGCATTTCTTGTCCTGTATGGAATTGCTTTGGCAACAGAAGGCTGGGGTGTTGTTGCTAGTCTGATAATTTATCCT CCGTTTGCGGGTGCTGCTGTATCAGCTATCACCCTTGTAGTAGCCTTTGGGTTTGCTGTTTCTCGCCCATGTTTGACTCTTGAGgttagttttctggttg tttgatttatttgttccttaaaataaagattagtggttagtggttcatttaaatcacttcgctaattccttctgatgttcttcagATGATGGAGGTTGCT GTACGCTTTCTTAGCAAGGATACTATAGTGCAAGCTATCTCTCGATCTGCCACGAAAgtaagttacactctgatgtgtctcttgaaaatcatattgatat tctattattggccttatttcaacacattcacgtaatatggagctccatgggatgtatgatttattccgtctttgcaacttgttaattacagACAAGAAAT GCTCTATCCGGCACGTATTCAGCTCCCCAAAGGTCCGCCAGCTCTGCAGCTCTTCTGGTTGGGGATCCCTCTGCAATGCGTGATAAAGCAGGGAACTTTG TGCTTCCTAGAGATGATGTCATGAAATTAAGGGATCGTCTCAGGAACGAAGAAAGAGTTGCTGGATCAATCTTCTACAAAATGCAATGCAGGAAAGGATT CCGTCATGAACCACCTACAAATGTAGATTATAGAAGAGACATGTGTGCCCATGCAAGAGTTTTGGCACTGGAAGAGGCAATTGATACAGAATGGGTGTAT ATGTGGGACAAATTTGGTGGTTATTTACTACTATTGTTAGGTTTGACAGCTAAGGCGGAGAGAGTTCAGgtgaatcctgattctaaattttcatatattc ttctctatgtatgtctaacacgggattattacaatgttgtagGATGAGGTACGGTTGCGGCTCTTCTTAGATAGCATTGGGTTCTCGGATTTAAGTGCCA GAAAAATCAGTAAATGGAAGCCAGAGGATAGAAGACAATTCGAAATTATTCAAGAGAGgtatatgtttcttataattatgtggtttgacgaagctgaact cttagactgttgcctatcattttcttttgtgttgtaaattttagTTATCTGAGAGAGAAAGAGATGGAAGAGGAAAGCCTTATGCAGAGACGTGAAGAAG AAGGGAGAGGTAAAGAAAGAAGGAAAGCTCTTTTGGAGAAGGAAGAGCGCAAATGGAAGGAAATTGAAGCGTCCCTTATTCCATCTATTCCTAATGCTGG TAGCAGGGAGGCAGCAGCCATGGCAGCTGCAATACGTGCTGTTGGGGGTGATTCTGTCCTTGAGGATTCCTTCGCAAGAGAGAGGGTCTCGGGTATTGCA CGTAGGATACGCACTGCTCAACTAGAACGACGTGCACAACAGgttaaaacttatttttatattctgcaagtgttctttcttatgatgctgattaatggag aattaactaagaaaagttattaccagACTGGAATATCTGGGGCAGTTTGTGTTCTTGATGATGAACCAATGATAAGTGGTAAACATTGCGGCCAAATGGA CTCAAGTGTCTGTCAAAGTCAGAAGATTAGCTTTTCCGTTACAGCAATGATCCAATCCGATTCTGGACCTGTATGTCTTTTTGGCACTGAATTTCAAAAG AAAGTATGTTGGGAGATTCTGGTTGCTGGTTCTGAGCAAGGAATTGAGGCTGGCCAAGTTGGGCTTAGGTTGATAACAAAAGGTGAGAGGCAGACAACCG TTGCTAGAGAGTGGTATATTGGTGCAACCAGCATAACTGATGGAAGgtctaactctttttcccctcagtttccatattgcaaaatttacttcgaggactt ttatgatccatatttctcatgatctggtttggcaaaagtttccgatgttatcatggatttctgtcatatttatatattagctgtttcaatcacagGTGGC ATACAGTGACAATCACAATTGATGCTGATGCGGGGGAAGCTACTTGTTACATAGATGGTGGGTTTGATGGCTACCAGAATGGGTTACCTCTAAGTATTGG CAGTGCCATTTGGGAACAAGGAGCTGAAGTTTGGTTGGGTGTTAGGCCACCTATAGATGTTGATGCATTCGGGAGATCAGATAGTGATGGCGTCGAATCA AAGATGCATATTATGGATGTTTTCCTTTGGGGGAAATGCTTAAGTGAAGAAGAGGCCGCTTCTTTGCATGCAGCCATTGGCATGGCTGACTTAGACATGA TTGATTTGTCTGATGACAATTGGCAATGGACGGATTCACCCCCCAGAgtatgttttccttctgttgactgttggcatattttttcagtccgatgtttgtt aaaaggctaatgttaaaacctattctaatttttgttgattcctttctctttttaccagGTCGATGGTTGGGATAGTGATCCTGCCGATGTTGATCTCTAT GATAGGGATGACGTAGATTGGGATGGACAATATTCCAGTGGGAGGAAAAGAAGATCAGGTCGGGATTTTGTAATGAGTGTCGATTCCTTTGCCAGGAGAC ACAGGAAACCCAGGATGGAGACACAAGAAGATATAAATCAAAGAATGCGTTCAGTTGAGTTGGCTGTCAAAGAAGCTCTCTCTGCACGAGGTGATAAGCA ATTTACTGACCAGGAATTTCCTCCAAATGATCGCTCTTTATTTGTGGATACACAAAATCCCCCATCAAAATTGCAGgtatggattgttaaatttttctca ttttttctgtttttagttaaatatcattttaagtgattatatatctggacacaaaatctgccttcacatagatcaagtaaaactaacaacttgatgggaa ctctaaccttttgagtgtcataatttcagGTTGTTTCTGAATGGATGAGACCTGACTCCATTGTGAAAGAAAACGGTAGTGATTCCCGTCCCTGCCTGTT CTCTGGGGATGCAAATCCTTCAGATGTTTGCCAGgtttgatcacttactttttctgttcagttactttttcctgaccgtcttgtatgcatgtcaattcaa aatgatcccagagatttattcttgcgattgggttaacttgttttatagGGGCGTTTGGGGGATTGTTGGTTCTTAAGCGCCGTTGCAGTTTTGACAGAGG TTTCACGAATATCTGAAGTGATCATTACTCCTGAATACAACGAGGAAGGGATCTACACTGTTCGTTTTTGTATTCAGgttcctgtctcaaacattctttc acggcactgctttgttctcttgattgtagcatcgtgcaggttcttctatgatttgtgtacaatcagaggtttgaagtttgattgctttccccttgcagGG TGAGTGGGTTCCTGTTGTTATCGATGACTGGATTCCATGTGAATCACCTGGTAAACCAGCTTTTGCTACTAGCAGAAAGCTCAATGAACTCTGGGTCTCC ATGGTGGAGAAAGCATATGCCAAGCTCCATGGTTCTTATGAGGCACTGGAGGGGGGACTGGTTCAGGATGCTCTTGTCGACCTAACTGGAGGAGCTGGTG AGGAGATTGACTTGCGGAGTGCTCAAGCACAAATAGATCTTGCAAGTGGCAGATTGTGGTCTCAATTGTTACGTTTTAAACAAGAGGGGTTCTTACTTGG TGCTGGAAGTCCATCAGGATCTGATGTTCATGTATCTTCCAGTGGCATTGTGCAAGGGCATGCTTACTCCGTCTTACAGgtattcccttttgctttggtt gcatttgccatatcctgagtatgagaacacaatttaatatatttacgtactgtctttcttcagGTGAGAGAGGTTGATGGGCACAGACTTGTTCAGATTC GAAATCCATGGGCTAATGAAGTTGAGTGGAATGGTCCCTGGTCAGACTCATCCCCAGAGTGGACTGATAGGATGAAGCACAAGCTGAAGCATGTTCCACA Ggtagtttctcttgcgcttaacttctttacagctcattccttgtgttccttgaattctcttagtccgattagggggactatatttcagaaactggtaaaa gattttgctttattgttaacaaggggacacacatggacaaaacatagtgctcacaaacacatagttaggtgtaaatatatgtaattatgctatggtttct tcaagtaaagtatattgcgtactgatcctgtgcattctgttaaacagTCAAAAGAAGGTATATTCTGGATGTCTTGGCAAGATTTCCAGATTCATTTCAG ATCAATATATGTGTGTCGGGTTTACCCCCGTGAGATGCGCTACTCTGTAAATGGCCAATGGCGAGGTTATAGTGCCGGTGGCTGCCAAGATTATAGCTCA TGGCATCAAAATCCACAATTCAGGCTGAGGGCAACTGGTTCTGATGCATCTTTACCAATTCATGTGTTCATCACCTTAACTCAGgcacatgctatccctt gatggaaactttttctatctataattcttttgtaattatcctcagctcattctcccaatgttacttacagGGCGTAGGTTTCTCGAGAACAACTCCTGGA TTTCGTAACTACCAATCAAGCCATGATTCACAGTTGTTCTATATCGGATTGAGGATTCTTAAAACTCGTGGACGTCGTGCTGCTTACAACATATTTCTTC ATGAATCTGTTGGTGGAACAGACTATGTGAATTCCCGTGAGATTTCATGTGAAATGGTTCTTGACCCTGATCCTAAGGGTTATACTATTGTCCCAACCAC GATACACCCAGGGGAAGAAGCACCTTTTGTCCTTTCAGTCTTCACAAAAGCATCCATTGTTCTTGAAGCTTTGTAGtgcccgtattgtcagatggctctc tcagcaacctgcatgccatgaaatcatccaagtgcttgtgttgtttaaggaaccagacggcttacgtctcaatgttaagacttgttttgcccacgatcca cgcaacattagagaaggtaaatttcttaacctttctgcaaggattgctcttttcctatcctcactcactgttcctcattcagacttaactccctccgcaa cagcgtctgatctgatagctggccatcacattattggtgaatctatgaagtctcgggataaaatgttttagttattgtcctgattttgaaccacgaagtt aactgctcagaggatagataatttgcactggagaaagcacttttcaggcatggctcaccggcattccatctcgatcttgagacacgcatcaaatgtacat ttgtaggtattgcgacaagtacagatttattaaatgtagaataactacttcataactgaggaaacaaggagagaaataggagacttgtgacttgttgggt aaaggtttggtattcggtagtggtagctgcagttttggttggtgtgttgtaatattcagacactaatctgtgtgcagatttcgtttcaactctaatatat gagggctctctttctctctcgttctctttcactatctctcttaatctgtgtttggagttctctttacactcgctcacccatttgtaaatggagattctag aact
Border_1 (16696_LB2)
GCCTTTTCAGAAATGGATAAATAGCCTTGCTTCCTATTATATCTTCCCAAATTACCAATACATTACACTAGCATCTGAATTTCATAACCAATCTCGATAC
ACCAAATCGAATTCAATTCGGCGTTAATTCAGTACATTAAAAACGTCCGCAATGTGTTATTAAGTTGTCTAAGCGTCAATTTGTTTACACCACAATATAT
CCTGTTCAACTTTAAATATAAGTAAATAATTTTTATCTTTTTACCAAGAACAATAACTGCAGCTGATGTGATTCCTCCAAGCCAACGTGATTCCCTAGCT
GTGAGACCATATAGGACTGAGTAGGCAAGGAGAACTACGAGTGAGCCCAGGTACAGAAGGCCAAGATGTGAAGCCCTACATATATGCAAGAAAAAAGATT
ATAGCTGATTGATAAAAATATGAATGAGAACATTTCAGCGCTCAGTATAAACAAATCATAACACCATCCACACCACCTGTTGGGCGAAAAAAAAAAAAGC
TAGAGAGAAACGGCAAGATTACTAGCCCTGAATCCTGTTCAGATTTAGGTTGGTTCCAAGTATTCAATAGTTTGTTGATTGCAAAATTCAGGAACAATCA
TAACATAAGAGGCCAGCTATGCCAAAATATTATTGAATTTCTAGGTAGAGAGCAACAAGAACTTACCTGCTGGTTTGCCGGGGATATAATTCATTAGGAT
CAGGAGGTTCAGGCAAACAAGCCACAGGACCCACTTCTATACAATCTGAATAAGCAAATTTATATGCCCTCCTTACATATTCGTCCACATCTAAACCATT
TCCTGCGGTGATGGAAAATTTCGCAAAGTTTCAACAACTTAAATTGAGGTTGGAGGTTAAAAAGTATGCATGTTAATAGATACGGAAGATTTGCTTTGAG
CTAATACAAAGAATTAAGTAGACTGATAAAGTTGAATACACAGCAATTGCATGTTGATTAAGGACTGGGTAAACTTTACCATTAAAGACCATGCGGCAGA
TAAATAGCATGTTAATTGCCAACGCGATTGCTGATACACCGAAAAAGAAACCAGAAGGAGAATATTGCTGAGATGCATGCGCACCAGCCGTAACATAGAC
AGCACAGAGTTCATACGCACATAGTAAGGCAACACCAAGAAGGAGAAGTAAAGCGACAGCTCCTGTTTGTTCAAACGAGAATGTAAGAAAGAAGTTCAAT
AGTTCATTCACAATAAGTAGTGATGTGTCAGGTATGTTCTGCTTTGTTCCCATTCCTACATCGGATACTTCATACACTAACACTACGTGCCACCACTATT
ATCAAGAATATAACACCAGAAGAATGTTGTGAATTAAGTCAGAAAGAGTAGATGGTAAACATACTTGAGCTTTGCCACTGGGTCCTCCACCAAAGCATGA
TTGAGTAGAATGCCAGTAAAAGGGCTGTTCCAGCCATTATTATCGCCAGCCCAATGATATGTCGATCCAATATCACAATCAGCCAAGAACCCCATCCTAT
CAAGATTGCAATAGGGGATACTACCACAATCCAAGCAAAAAGAGATAGAACACCACATAGTATATCAAGCTGAGGACCTTGCAATACTTTTGGCCATTTT
CTAGCAAAGATCCAACTGCAAAAATAGAACACATTCCAAAATCATTCACTAACTATGGTTCTATGTCAATACTACTCATACAAAGCAACTCTATCAAGCG
CCATATATGACAAAACAACACCTAGAGCTGCCCAAACATATGAA
| Start of BLAST Alignment: | NT 1728 / Intron 5 of 29 |
| First 15 bp Perfect Match: | NT 1678 / Intron 5 of 29 |
BLAST Details: Query Sequence: 16696_LB2 Length: (1744 letters) Database: Genes from AGI, Total Genome (DNA); Smallest Sum High Probability Sequences producing High-scoring Segment Pairs: Score P(N) N At1g55350 68414.t05796 calpain-type cysteine protease fam... 7637 0. 1 At1g51730 68414.t05343 RWD domain-containing protein cont... 200 0.99 1 At2g38720 68415.t04383 microtubule associated protein (MA... 195 0.9997 1 >At1g55350 68414.t05796 calpain-type cysteine protease family identical to calpain-like protein GI:20268660 from [Arabidopsis thaliana]; contains Pfam profiles: PF00648 Calpain family cysteine protease, PF01067 Calpain large subunit,domain III; identical to cDNA calpain-like protein GI:20268659 Length = 11,171 Minus Strand HSPs: Score = 7637 (1151.9 bits), Expect = 0., P = 0. Identities = 1557/1591 (97%), Positives = 1557/1591 (97%), Strand = Minus / Plus Query: 1744 TTCATATGTTTGGGCAGCTCTAGGTGTTGTTTTGTCATATATGGCGCTTGATAGAGTTGC 1685 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 628 TTCATATGTTTGGGCAGCTCTAGGTGTTGTTTTGTCATATATGGCGCTTGATAGAGTTGC 687 Query: 1684 TTTGTATGAGTAGTATTGACATAGAACCATAGTTAGTGAATGATTTTGGAATGTGTTCTA 1625 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 688 TTTGTATGAGTAGTATTGACATAGAACCATAGTTAGTGAATGATTTTGGAATGTGTTCTA 747 Query: 1624 TTTTTGCAGTTGGATCTTTGCTAGAAAATGGCCAAAAGTATTGCAAGGTCCTCAGCTTGA 1565 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 748 TTTTTGCAGTTGGATCTTTGCTAGAAAATGGCCAAAAGTATTGCAAGGTCCTCAGCTTGA 807 Query: 1564 TATACTATGTGGTGTTCTATCTCTTTTTGCTTGGATTGTGGTAGTATCCCCTATTGCAAT 1505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 808 TATACTATGTGGTGTTCTATCTCTTTTTGCTTGGATTGTGGTAGTATCCCCTATTGCAAT 867 Query: 1504 CTTGATAGGATGGGGTTCTTGGCTGATTGTGATATTGGATCGACATATCATTGGGCTGGC 1445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 868 CTTGATAGGATGGGGTTCTTGGCTGATTGTGATATTGGATCGACATATCATTGGGCTGGC 927 Query: 1444 GATAATAATGGCTGGAACAGCCCTTTTACTGGCATTCTACTCAATCATGCTTTGGTGGAG 1385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 928 GATAATAATGGCTGGAACAGCCCTTTTACTGGCATTCTACTCAATCATGCTTTGGTGGAG 987 Query: 1384 GACCCAGTGGCAAAGCTCAAGTATGTTTACCATCTACTCTTTCTGACTTAATTCACAACA 1325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 988 GACCCAGTGGCAAAGCTCAAGTATGTTTACCATCTACTCTTTCTGACTTAATTCACAACA 1047 Query: 1324 TTCTTCTGGTGTTATATTCTTGATAATAGTGGTGGCACGTAGTGTTAGTGTATGAAGTAT 1265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1048 TTCTTCTGGTGTTATATTCTTGATAATAGTGGTGGCACGTAGTGTTAGTGTATGAAGTAT 1107 Query: 1264 CCGATGTAGGAATGGGAACAAAGCAGAACATACCTGACACATCACTACTTATTGTGAATG 1205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1108 CCGATGTAGGAATGGGAACAAAGCAGAACATACCTGACACATCACTACTTATTGTGAATG 1167 Query: 1204 AACTATTGAACTTCTTTCTTACATTCTCGTTTGAACAAACAGGAGCTGTCGCTTTACTTC 1145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1168 AACTATTGAACTTCTTTCTTACATTCTCGTTTGAACAAACAGGAGCTGTCGCTTTACTTC 1227 Query: 1144 TCCTTCTTGGTGTTGCCTTACTATGTGCGTATGAACTCTGTGCTGTCTATGTTACGGCTG 1085 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1228 TCCTTCTTGGTGTTGCCTTACTATGTGCGTATGAACTCTGTGCTGTCTATGTTACGGCTG 1287 Query: 1084 GTGCGCATGCATCTCAGCAATATTCTCCTTCTGGTTTCTTTTTCGGTGTATCAGCAATCG 1025 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1288 GTGCGCATGCATCTCAGCAATATTCTCCTTCTGGTTTCTTTTTCGGTGTATCAGCAATCG 1347 Query: 1024 CGTTGGCAATTAACATGCTATTTATCTGCCGCATGGTCTTTAATGGTAAAGTTTACCCAG 965 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1348 CGTTGGCAATTAACATGCTATTTATCTGCCGCATGGTCTTTAATGGTAAAGTTTACCCAG 1407 Query: 964 TCCTTAATCAACATGCAATTGCTGTGTATTCAACTTTATCAGTCTACTTAATTCTTTGTA 905 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1408 TCCTTAATCAACATGCAATTGCTGTGTATTCAACTTTATCAGTCTACTTAATTCTTTGTA 1467 Query: 904 TTAGCTCAAAGCAAATCTTCCGTATCTATTAACATGCATACTTTTTAACCTCCAACCTCA 845 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1468 TTAGCTCAAAGCAAATCTTCCGTATCTATTAACATGCATACTTTTTAACCTCCAACCTCA 1527 Query: 844 ATTTAAGTTGTTGAAACTTTGCGAAATTTTCCATCACCGCAGGAAATGGTTTAGATGTGG 785 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1528 ATTTAAGTTGTTGAAACTTTGCGAAATTTTCCATCACCGCAGGAAATGGTTTAGATGTGG 1587 Query: 784 ACGAATATGTAAGGAGGGCATATAAATTTGCTTATTCAGATTGTATAGAAGTGGGTCCTG 725 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1588 ACGAATATGTAAGGAGGGCATATAAATTTGCTTATTCAGATTGTATAGAAGTGGGTCCTG 1647 Query: 724 TGGCTTGTTTGCCTGAACCTCCTGATCCTAATGAATTATATCCCCGGCAAACCAGCAGGT 665 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1648 TGGCTTGTTTGCCTGAACCTCCTGATCCTAATGAATTATATCCCCGGCAAACCAGCAGGT 1707 Query: 664 AAGTTCTTGTTGCTCTCTACCTAGAAATTCAATAATATTTTGGCATAGCTGGCCTCTTAT 605 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1708 AAGTTCTTGTTGCTCTCTACCTAGAAATTCAATAATATTTTGGCATAGCTGGCCTCTTAT 1767 Query: 604 GTTATGATTGTTCCTGAATTTTGCAATCAACAAACTATTGAATACTTGGAACCAACCTAA 545 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1768 GTTATGATTGTTCCTGAATTTTGCAATCAACAAACTATTGAATACTTGGAACCAACCTAA 1827 Query: 544 ATCTGAACAGGATTCAGGGCTAGTAATCTTGCCGTTTCTCTCTAGCNNNNNNNNNNNNCG 485 |||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 1828 ATCTGAACAGGATTCAGGGCTAGTAATCTTGCCGTTTCTCTCTAGCTTTTTTTTTTTTCG 1887 Query: 484 CCCAACAGGTGGTGTGGATGGTGTTATGATTTGTTTATACTGAGCGCTGAAATGTTCTCA 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1888 CCCAACAGGTGGTGTGGATGGTGTTATGATTTGTTTATACTGAGCGCTGAAATGTTCTCA 1947 Query: 424 TTCATATTTTTATCAATCAGCTATAATCTTTTTTCTTGCATATATGTAGGGCTTCACATC 365 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1948 TTCATATTTTTATCAATCAGCTATAATCTTTTTTCTTGCATATATGTAGGGCTTCACATC 2007 Query: 364 TTGGCCTTCTGTACCTGGGCTCACTCGTAGTTCTCCTTGCCTACTCAGTCCTATATGGTC 305 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2008 TTGGCCTTCTGTACCTGGGCTCACTCGTAGTTCTCCTTGCCTACTCAGTCCTATATGGTC 2067 Query: 304 TCACAGCTAGGGAATCACGTTGGCTTGGAGGAATCACATCAGCTGCAGTTATTGTTCTTG 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2068 TCACAGCTAGGGAATCACGTTGGCTTGGAGGAATCACATCAGCTGCAGTTATTGTTCTTG 2127 Query: 244 GTAAAAAGATAAAAATTATTTACTTATATTTAAAGTTGAA-CAGGATA--T-ATTGTGGT 189 |||||||||||||||||||||||||||||||||||||||| |||| || | ||| | Sbjct: 2128 GTAAAAAGATAAAAATTATTTACTTATATTTAAAGTTGAAGCAGGCTACTTGATTATTCC 2187 Query: 188 GTAAA-CAAATTGACGCTTAGACAACTTAAT 159 || || || | ||||| | | || || Sbjct: 2188 TCAACTCATCTTCATGCTTA-ATATTTTCAT 2217 >At1g51730 68414.t05343 RWD domain-containing protein contains Pfam profile PF05773: RWD domain; similar to GCN2 eIF2alpha kinase (GI:6066585) [Mus musculus]; similar to GCN2beta (GI:10764163) [Mus musculus]; similar to RING finger protein 25 (RING finger protein AO7) (Swiss-Prot:Q9QZR0) [Mus musculus]; similar to RING finger protein 25 (Swiss-Prot:Q96BH1) [Homo sapiens] Length = 2271 Minus Strand HSPs: Score = 200 (36.1 bits), Expect = 4.5, P = 0.99 Identities = 94/151 (62%), Positives = 94/151 (62%), Strand = Minus / Plus
Border_2 (16696_LB1)
GCCTTTTCAGAAATGGATAAATAGCCTTGCTTCCTATTATATCTTCCCAAATTACCAATACATTACACTAGCATCTGAATTTCATAACCAATCTCGATAC
ACCAAATCGAATTCAATTCGGCGTTAATTCAGTACATTAAAAACGTCCGCAATGTGTTATTAAGTTGTCTAAGCGTCAATTTGTTTACACCGCAATGGGG
CATGCTTGTATGGGTTTAAGCTTCTTCAGAATCGTGTTCTGGCACTTTTTGTTGCTGGCATATCCCGTCTTTTCCTAATATGTTTTGGCATACACTACTG
GTTTGTTTCTGAGCTAAAAAGCTTGTTACTTATCTATAGATCTAAAGTTTGTCCCCTTCATGGCATGTAAGATATTATCCGTTCTGTTGTTGCAGGTACC
TAGGGCATTGTATTAGTTACATTTTCGTAGCATCAGTTCTATCAGGTGCTGCTGTTTCTCGGCATCTATCTATAACAGACCCATCAGCTGCAAGAAGAGA
TGCCTTACAGAGCACAGTGATCCGCTTGAGAGAAGGTTTTCGGAGAAAAGAGCAGAATAGTTCTTCAAGTTCTTCAGATGGTTGTGGCTCAAGTATAAAA
AGAAGTAGTAGTATCGATGCTGCCATACTGGTTGTACTAATGAAGCAAATCGTACGGCAGAATCTTGCACGGCTGACAATCTAACTCGAACAGGCAGCTC
TCAGGAGGGAATCAATAGCGACAAAAGCGAAGAAAGTGGAAGACCAAGCTTAGGTTTACGTAGTAGTTCATGTCGTTCTGTGGTCCAAGAGCCCGAAGCA
GGAACGTCTTATTTTATGGACAAAGTTTCTGAT
| Start of BLAST Alignment: | NT 1740 / Exon 6 of 30 |
| First 15 bp Perfect Match: | NT 1742 / Exon 6 of 30 |
BLAST Details: Query Sequence: 16696_LB1 Length: (833 letters) Database: Genes from AGI, Total Genome (DNA); Smallest Sum High Probability Sequences producing High-scoring Segment Pairs: Score P(N) N At1g55350 68414.t05796 calpain-type cysteine protease fam... 3181 4.4e-138 1 At1g43300 68414.t04554 pseudogene, Ulp1 protease family c... 217 0.23 1 At3g61180 68416.t06327 zinc finger (C3HC4-type RING finge... 188 0.997 1 >At1g55350 68414.t05796 calpain-type cysteine protease family identical to calpain-like protein GI:20268660 from [Arabidopsis thaliana]; contains Pfam profiles: PF00648 Calpain family cysteine protease, PF01067 Calpain large subunit,domain III; identical to cDNA calpain-like protein GI:20268659 Length = 11,171 Plus Strand HSPs: Score = 3181 (483.3 bits), Expect = 4.4e-138, P = 4.4e-138 Identities = 639/641 (99%), Positives = 639/641 (99%), Strand = Plus / Plus Query: 194 AATGGGGCATGCTTGTATGGGTTTAAGCTTCTTCAGAATCGTGTTCTGGCACTTTTTGTT 253 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2230 ATTGGGGCATGCTTGTATGGGTTTAAGCTTCTTCAGAATCGTGTTCTGGCACTTTTTGTT 2289 Query: 254 GCTGGCATATCCCGTCTTTTCCTAATATGTTTTGGCATACACTACTGGTTTGTTTCTGAG 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2290 GCTGGCATATCCCGTCTTTTCCTAATATGTTTTGGCATACACTACTGGTTTGTTTCTGAG 2349 Query: 314 CTAAAAAGCTTGTTACTTATCTATAGATCTAAAGTTTGTCCCCTTCATGGCATGTAAGAT 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2350 CTAAAAAGCTTGTTACTTATCTATAGATCTAAAGTTTGTCCCCTTCATGGCATGTAAGAT 2409 Query: 374 ATTATCCGTTCTGTTGTTGCAGGTACCTAGGGCATTGTATTAGTTACATTTTCGTAGCAT 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2410 ATTATCCGTTCTGTTGTTGCAGGTACCTAGGGCATTGTATTAGTTACATTTTCGTAGCAT 2469 Query: 434 CAGTTCTATCAGGTGCTGCTGTTTCTCGGCATCTATCTATAACAGACCCATCAGCTGCAA 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2470 CAGTTCTATCAGGTGCTGCTGTTTCTCGGCATCTATCTATAACAGACCCATCAGCTGCAA 2529 Query: 494 GAAGAGATGCCTTACAGAGCACAGTGATCCGCTTGAGAGAAGGTTTTCGGAGAAAAGAGC 553 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2530 GAAGAGATGCCTTACAGAGCACAGTGATCCGCTTGAGAGAAGGTTTTCGGAGAAAAGAGC 2589 Query: 554 AGAATAGTTCTTCAAGTTCTTCAGATGGTTGTGGCTCAAGTATAAAAAGAAGTAGTAGTA 613 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2590 AGAATAGTTCTTCAAGTTCTTCAGATGGTTGTGGCTCAAGTATAAAAAGAAGTAGTAGTA 2649 Query: 614 TCGATGCTG-CCATACTGGTTGTACTAATGAAGCAAATCGTACGGCAGAATCTTGCACGG 672 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2650 TCGATGCTGGCCATACTGGTTGTACTAATGAAGCAAATCGTACGGCAGAATCTTGCACGG 2709 Query: 673 CTGACAATCTAACTCGAACAGGCAGCTCTCAGGAGGGAATCAATAGCGACAAAAGCGAAG 732 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2710 CTGACAATCTAACTCGAACAGGCAGCTCTCAGGAGGGAATCAATAGCGACAAAAGCGAAG 2769 Query: 733 AAAGTGGAAGACCAAGCTTAGGTTTACGTAGTAGTTCATGTCGTTCTGTGGTCCAAGAGC 792 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2770 AAAGTGGAAGACCAAGCTTAGGTTTACGTAGTAGTTCATGTCGTTCTGTGGTCCAAGAGC 2829 Query: 793 CCGAAGCAGGAACGTCTTATTTTATGGACAAAGTTTCTGAT 833 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 2830 CCGAAGCAGGAACGTCTTATTTTATGGACAAAGTTTCTGAT 2870 >At1g43300 68414.t04554 pseudogene, Ulp1 protease family contains Pfam profile PF02902: Ulp1 protease family, C-terminal catalytic domain Length = 3003 Minus Strand HSPs: Score = 217 (38.6 bits), Expect = 0.26, P = 0.23 Identities = 219/383 (57%), Positives = 219/383 (57%), Strand = Minus / Plus