At5g37510 SYNGENTA 24022
Genomic Sequence (from TAIR)
gtctttatctgaaatatacaaatgttcaattagtacattgacctaaaagtctctaggactaatgattgattagaggtttattttgctagaggttctaata tgttgtatggaactagaagcaagattgttttaaactcaatgtcattaagtgaattagagaaagatcatcaaaactcttaaactatatctcccaaaattaa cttaattcagtttgaaaagaaaaagcccacaaagcccaaaactcactcattcataagccaattataatatccaaaataaaagcccataaagcccaaaact cactcattcgtgtctccttctctctcgcacaaatgcttcaggagttctcacaacaagatcgagaaatacacacatagaagacgaagaagaagaagaagac gatacagatccacaacgccATGGGTTTAGGCATCTTAGCTTCTCGAACAATTCGACCAGCTTCACGTCTTCTTCAATCTCAAACCTCCAATTTCTTCCTC CGCACAATCGTCTCAAAACCAGAGCTCCAATCTCCTGAATCCGCTGCTGTCTCTGAGCCTGAGCCGCCGACACAGATTCTCCCTCCTAGAAACCCTGTAG GTGGAGCACGCGTCCACTTCTCGAATCCTGAAGATGCGATCGAGGTCTTTGTCGATGGTTACGCGGTCAAAGTCCCTAAAGGATTCACTGTTCTTCAGGC TTGTGAGGTCGCTGGAGTTGATATCCCGAGGTTTTGTTATCATTCTCGTTTATCTATTGCTGGAAATTGCAGGATGTGTCTTGTTGAGGTTGAGAAATCT CCTAAGCCTGTAGCTTCATGTGCCATGCCTGCGCTTCCTGgttagttcgattccaggaaaatttctatgctgatggattgattttgatcgttgattggtg gaatatatttggatttggtgctattgctaagagtttttgtaacagGGATGAAGATTAAGACTGATACACCGATAGCTAAGAAGGCGAGGGAGGGAGTGAT GGAGTTTTTGTTGATGAATCACCCTTTGGATTGTCCTATTTGTGACCAAGGAGGAGAGTGTGATCTTCAGGATCAGTCTATGGCTTTTGGATCTGATAGA GGACGTTTTACTGAGATGAAAAGATCTGTTGTTGATAAGAATCTTGGTCCTCTTGTGAAGACTGTTATGACTCGGTGTATCCAGTGTACAAGgttactaa tatagtttgcttatagtgtgatgttttagttaatgtgatagatacgctatcctgttgattaggttttgtatgtataatgtttttgtagGTGTGTACGATT TGCTTCTGAAGTTGCTGGGGTTCAGGATCTTGGTATACTAGGTCGTGGTAGTGGAGAGGAAATTGGAACTTATGTTGAAAAGCTTATGACCAGTGAACTC TCTGGAAATGTTATTGATATCTGTCCTGTTGGAGCCTTGACCTCAAAGCCTTTTGCCTTTAAAGCCAGAAACTGGGAGTTGAAAGCAACAGAAACTATTG ATGTTAGTGATGCTGTTGGGTCCAACATCCGTGTTGATAGTAGAGGACCAGAAGTAATGCGTATCATTCCACGCCTGAATGAGgtatgtaatgcttttgt tcaaaaacactatttttaaaagtattttgctggatgttgaacttgtgaatgttcttattcagGATATAAACGAAGAATGGATATCTGACAAAACCCGATT CTGTTATGACGGCCTGAAAAGACAAAGGCTGAGCGACCCTATGATCCGAGATTCCGATGGACGATTCAAGGCAGTGAGCTGGCGTGATGCCTTGGCTGTT GTGGGTGATATCATTCATCAGGTGAAGCCAGATGAGATTGTTGGAGTAGCAGGTCAGCTATCTGATGCGGAATCCATGATGGTACTGAAGGACTTCGTTA ACAGAATGGGCTCAGACAATGTATGGTGTGAAGGAACAGCTGCTGGTGTTGATGCTGATCTTAGATACAGTTATCTGATGAACACTAGCATCAGTGGACT TGAAAACGCCGATCTCTTCCTTCTCATCGGTACCCAGgtgagatttccaccctgtcttttttgtatggtttctggtaccggattagacagaccgctctgt atttggaacaatgacataagaaaaaccaaattgtgtagtttgatactttgatttagtggtgtggcttaaggttctgtgcataatttggaatacagaggca aatagaaaggagaaacaagcaaaattaagtttctaaaaaacagatcagatgttaacatttcgcttgtattgaatattcctgatccagaccaatctagatc aagcaaaacttgctcttccagatatcaaagttgtgaaggttttttagcagtacattcaccagtttttgtctatttttaccagCCTAGGGTGGAAGCTGCA ATGGTGAATGCTAGGATCTGCAAGACAGTCCGTGCATCAAATGCCAAGGTTGGATATGTTGGTCCACCTGCAGAGTTCAATTACGACTGCAAACACCTCG GGACTGGGCCTGATACTCTCAAGGAAATTGCTGAGGGACGGCATCCATTCTGTACGGCTCTCAAGAACGCCAAAAACCCTGCAATCATTGTTGGTGCTGG GCTCTTCAACAGAACTGATAA◄AAATGCTATCC◄TCTCTTCTGTGGAGTCCATTGCACAAGCCAACAATGTTGTCCGACCAGACTGGAACGGTCTCAACT TTCTCCTTCAGTATGCTGCCCAAGCGGCTGCTCTTGATCTTGGTCTCATTCAACAGTCCGCCAAAGCCCTCGAGTCTGCAAAATTCGTCTACTTGATGGG AGCAGACGATGTAAATGTTGACAAGATTCCTAAAGACGCCTTTGTGGTTTACCAAGGACACCATGGAGACAAAGCGGTTTACCGTGCAAACGTAATTCTC CCTGCATCGGCCTTCACTGAGAAAGAAGGAACCTATGAAAATACTGAAGGATTTACCCAACAGACTGTTCCAGCTGTTCCAACAGTTGGTG►ATGCAAGA GATGACTGGAAGATTGTGAGAGCCTTATCCGAGGTCTCGGGTGTGAAGCTTCCATACAACTCAATCGAAGGTGTTAGATCAAGAATAAAGA►GCGTTGCA CCAAATCTAGTCCACACAGATGAGCGAGAGCCAGCTGCTTTTGGGCCTTCATTGAAGCCTGAGTGCAAGGAGGCAATGAGCACAACACCGTTCCAAACCG TGGTTGAGAACTTTTACATGACAAACTCGATCACAAGAGCATCAAAGATCATGGCGCAGTGCAGTGCCGTGCTCTTGAAAAAGTGAgagctttaacttgg gttttcacattttctctcttttcgcaaaaataaagatactgattcttcgtttgctgtcctctttatagaccttttgtttaagcctgagtatcactgtatc tcgggtttagcttgcggtgaaatctataagcaatttgcaataagcacattgttagattcaaaactttgcagtgttaattggatgctttgtggcatcttgt attgttcttattaggactcccttttacatttgcatatatgaatttggaggcatggcgatatatacaatctctacttttatcgtttgttcttaaccattgt gattgttacaaataatgcaaatcttgaaaggattagatggtttccaatgtgagatgatcacttgtgaactaaactgtttttgacaagttatgttacctaa aatc
Border_1 (24022_LB)
GCCTTTTCAGAAATGGATAAATAGCCTTGCTTCCTATTATATCTTCCCAAATTACCAATACATTACACTAGCATCTGAATTTCATAACCAATCTCGATAC
ACCAAATCGAATTCAATTCGGCGTTAATTCAGTACATTAAAAACGTCCGCAATGTGTTATTAAGTTGTCTAAGCGTCAATTTGTTTACACCACTTTTATC
GTTTGTGTTATTTGCTGGACTAGATTTTATTATCAGTTCTGTTGAAGAGCCCAGCACCAACAATGATTGCAGGGTTTTTGGCGTTCTTGAGAGCCGTACA
GAATGGATGCCGTCCCTCAGCAATTTCCTTGAGAGTATCAGGCCCAGTCCCGAGGTGTTTGCAGTCGTAATTGAACTCTGCAGGTGGACCAACATATCCA
ACCTTGGCATTTGATGCACGGACTGTCTTGCAGATCCTAGCATTCACCATTGCAGCTTCCACCCTAGGCTGGTAAAAATAGACAAAAACTGGTGAATGTA
CTGCTAAAAAACCTTCACAACTTTGATATCTGGAAGAGCAAGTTTTGCTTGATCTAGATTGGTCTGGATCAGGAATATTCAATACAAGCGAAATGTTAAC
ATCTGATCTGTTTTTTAGAAACTTAATTTTGCTTGTTTCTCCTTTCTATTTGCCTCTGGATTCCAAATTATGCACAGAACCTTAAGCCACACCACTAAAT
CAAAGTATCAAACTACACAATTTGGTTTTTCTTATGTCATTGTTCCAAATACAGAGCGG
| Start of BLAST Alignment: | NT 2213 / Exon 5 of 5 |
| First 15 bp Perfect Match: | NT 2202 / Exon 5 of 5 |
BLAST Details: Query Sequence: 24022_LB Length: (759 letters) Database: Genes from AGI, Total Genome (DNA); Smallest Sum High Probability Sequences producing High-scoring Segment Pairs: Score P(N) N At5g37510 68418.t04192 NADH-ubiquinone dehydrogenase, mit... 2658 7.4e-116 1 >At5g37510 68418.t04192 NADH-ubiquinone dehydrogenase, mitochondrial, putative similar to NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial from Solanum tuberosum [SP|Q43644] Length = 3248 Minus Strand HSPs: Score = 2658 (404.9 bits), Expect = 7.4e-116, P = 7.4e-116 Identities = 538/543 (99%), Positives = 538/543 (99%), Strand = Minus / Plus Query: 759 CCGCTCTGTATTTGGAACAATGACATAAGAAAAACCAAATTGTGTAGTTTGATACTTTGA 700 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1753 CCGCTCTGTATTTGGAACAATGACATAAGAAAAACCAAATTGTGTAGTTTGATACTTTGA 1812 Query: 699 TTTAGTGGTGTGGCTTAAGGTTCTGTGCATAATTTGGAATCCAGAGGCAAATAGAAAGGA 640 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 1813 TTTAGTGGTGTGGCTTAAGGTTCTGTGCATAATTTGGAATACAGAGGCAAATAGAAAGGA 1872 Query: 639 GAAACAAGCAAAATTAAGTTTCTAAAAAACAGATCAGATGTTAACATTTCGCTTGTATTG 580 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1873 GAAACAAGCAAAATTAAGTTTCTAAAAAACAGATCAGATGTTAACATTTCGCTTGTATTG 1932 Query: 579 AATATTCCTGATCCAGACCAATCTAGATCAAGCAAAACTTGCTCTTCCAGATATCAAAGT 520 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1933 AATATTCCTGATCCAGACCAATCTAGATCAAGCAAAACTTGCTCTTCCAGATATCAAAGT 1992 Query: 519 TGTGAAGGTTTTTTAGCAGTACATTCACCAGTTTTTGTCTATTTTTACCAGCCTAGGGTG 460 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1993 TGTGAAGGTTTTTTAGCAGTACATTCACCAGTTTTTGTCTATTTTTACCAGCCTAGGGTG 2052 Query: 459 GAAGCTGCAATGGTGAATGCTAGGATCTGCAAGACAGTCCGTGCATCAAATGCCAAGGTT 400 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2053 GAAGCTGCAATGGTGAATGCTAGGATCTGCAAGACAGTCCGTGCATCAAATGCCAAGGTT 2112 Query: 399 GGATATGTTGGTCCACCTGCAGAGTTCAATTACGACTGCAAACACCTCGGGACTGGGCCT 340 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2113 GGATATGTTGGTCCACCTGCAGAGTTCAATTACGACTGCAAACACCTCGGGACTGGGCCT 2172 Query: 339 GATACTCTCAAGGAAATTGCTGAGGGACGGCATCCATTCTGTACGGCTCTCAAGAACGCC 280 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2173 GATACTCTCAAGGAAATTGCTGAGGGACGGCATCCATTCTGTACGGCTCTCAAGAACGCC 2232 Query: 279 AAAAACCCTGCAATCATTGTTGGTGCTGGGCTCTTCAACAGAACTGATAATAAAATCTAG 220 |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||| Sbjct: 2233 AAAAACCCTGCAATCATTGTTGGTGCTGGGCTCTTCAACAGAACTGATAA-AAATGCTA- 2290 Query: 219 TCC 217 ||| Sbjct: 2291 TCC 2293
Border_2 (24022_RB)
ATTAGGCACCCCAGGCTTTACACTTTATGCTTCCGGCTCGTATGTTGTGTGGAATTGTGAGCGGATAACAATTTCACACAGGAAACAGSTWTKAGCCATG
ATTCNCCAAGCTCGAAATTAACCCTCACTAAAGGGAACAAAAGCTGGAGCTCGCTTGAGCTTGGATCAGATTGTCGTTTCCCGCCTTCAGTTTAAACAAC
CCCGCAATGTGTTATTTGCTGGGCCAAAATTCGGGCGTTGCACCAAATCTAGTCCACACAGATGAGCGAGAGCCAGCTGCTTTTGGGCCTTCATTGAAGC
CTGAGTGCAAGGAGGCAATGAGCACAACACCGTTCCAAACCGTGGTTGAGAACTTTTACATGACAAACTCGATCACAAGAGCATCAAAGATCATGGCGCA
GTGCAGTGCCGTGCTCTTGAAAAAGTGAGAGCTTTAACTTGGGTTTTCACATTTTCTCTCTTTTCGCAAAAATAAAGATACTGATTCTTCGTTTGCTGTC
CTCTTTATAGACCTTTTGTTTAAGCCTGAGTATCACTGTATCTCGGGTTTAGCTTGCGGTGAAATCTATAAGCAATTTGCAATAAGCACATTGTTAGATT
CAAAACTTTGCAGTGTTAATTGGATGCTTTGTGGCATCTTGTATTGTTCTTATTAGGACTCCCTTTTACATTTGCATATATGAATTTGGAGGCATGGCGA
TATATACAATCTCTACTTTTATCGTTTGTTCTTAACCATTGTGATTGTTACAAATAATGCAAATCTTGAAAGGATTAGATGGTTTCCAATGTGAGATGAT
CACTTGTGAACTAAACTGTTTTTGACAAGTTATGTTACCTAAAATCATTTCAGTTT
| Start of BLAST Alignment: | NT 2570 / Exon 5 of 5 |
| First 15 bp Perfect Match: | NT 2669 / Exon 5 of 5 |
BLAST Details: Query Sequence: 24022_RB Length: (856 letters) Database: Genes from AGI, Total Genome (DNA); Smallest Sum High Probability Sequences producing High-scoring Segment Pairs: Score P(N) N At5g37510 68418.t04192 NADH-ubiquinone dehydrogenase, mit... 2508 4.4e-109 1 At1g29410 68414.t03224 phosphoribosylanthranilate isomera... 858 2.2e-33 1 At5g40240 68418.t04545 nodulin MtN21 family protein simil... 217 0.23 1 At4g11050 68417.t01707 endo-1,4-beta-glucanase, putative ... 202 0.76 1 >At5g37510 68418.t04192 NADH-ubiquinone dehydrogenase, mitochondrial, putative similar to NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial from Solanum tuberosum [SP|Q43644] Length = 3248 Plus Strand HSPs: Score = 2508 (382.4 bits), Expect = 4.4e-109, P = 4.4e-109 Identities = 556/606 (91%), Positives = 556/606 (91%), Strand = Plus / Plus Query: 132 AGGGAACAAAAG-CTGGA-GCTCGCTTGAGCTTGGATCAGATTGTCGTTTCCCGCCTTCA 189 | | || | | | ||||| | | | |||| | ||| || ||| | | | | | Sbjct: 2651 ATGCAAGAGATGACTGGAAGATTGTGAGAGCCTT-ATCCGAG-GTC-T--CGGGTGTGAA 2705 Query: 190 GTTTAAACAACCCCGCAATGTGTTATTTGCTGGGCCAA-AATTCGG-GCGTTGCACCAAA 247 | || | | | | |||| | | || | | ||| ||| | ||||||||||||| Sbjct: 2706 GCTTCCATA-CAACTCAATC-GA-AGGTGTTAGATCAAGAATAAAGAGCGTTGCACCAAA 2762 Query: 248 TCTAGTCCACACAGATGAGCGAGAGCCAGCTGCTTTTGGGCCTTCATTGAAGCCTGAGTG 307 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2763 TCTAGTCCACACAGATGAGCGAGAGCCAGCTGCTTTTGGGCCTTCATTGAAGCCTGAGTG 2822 Query: 308 CAAGGAGGCAATGAGCACAACACCGTTCCAAACCGTGGTTGAGAACTTTTACATGACAAA 367 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2823 CAAGGAGGCAATGAGCACAACACCGTTCCAAACCGTGGTTGAGAACTTTTACATGACAAA 2882 Query: 368 CTCGATCACAAGAGCATCAAAGATCATGGCGCAGTGCAGTGCCGTGCTCTTGAAAAAGTG 427 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2883 CTCGATCACAAGAGCATCAAAGATCATGGCGCAGTGCAGTGCCGTGCTCTTGAAAAAGTG 2942 Query: 428 AGAGCTTTAACTTGGGTTTTCACATTTTCTCTCTTTTCGCAAAAATAAAGATACTGATTC 487 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2943 AGAGCTTTAACTTGGGTTTTCACATTTTCTCTCTTTTCGCAAAAATAAAGATACTGATTC 3002 Query: 488 TTCGTTTGCTGTCCTCTTTATAGACCTTTTGTTTAAGCCTGAGTATCACTGTATCTCGGG 547 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3003 TTCGTTTGCTGTCCTCTTTATAGACCTTTTGTTTAAGCCTGAGTATCACTGTATCTCGGG 3062 Query: 548 TTTAGCTTGCGGTGAAATCTATAAGCAATTTGCAATAAGCACATTGTTAGATTCAAAACT 607 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3063 TTTAGCTTGCGGTGAAATCTATAAGCAATTTGCAATAAGCACATTGTTAGATTCAAAACT 3122 Query: 608 TTGCAGTGTTAATTGGATGCTTTGTGGCATCTTGTATTGTTCTTATTAGGACTCCCTTTT 667 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3123 TTGCAGTGTTAATTGGATGCTTTGTGGCATCTTGTATTGTTCTTATTAGGACTCCCTTTT 3182 Query: 668 ACATTTGCATATATGAATTTGGAGGCATGGCGATATATACAATCTCTACTTTTATCGTTT 727 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3183 ACATTTGCATATATGAATTTGGAGGCATGGCGATATATACAATCTCTACTTTTATCGTTT 3242 Query: 728 GTTCTT 733 |||||| Sbjct: 3243 GTTCTT 3248 >At1g29410 68414.t03224 phosphoribosylanthranilate isomerase, putative strong similarity to GI:619749 from [Arabidopsis thaliana] (Plant Cell 7 (4), 447-461 (1995)) Length = 2129 Plus Strand HSPs: Score = 858 (134.8 bits), Expect = 2.2e-33, P = 2.2e-33 Identities = 276/366 (75%), Positives = 276/366 (75%), Strand = Plus / Plus