At5g22370 SYNGENTA 35154
Genomic Sequence (from TAIR)
cttcgccttgaatcgagtcttcgacgagtctccggctgcgagtttctcttgctccggcaaacagacctgtcattgcttctctctccggctaactacacag gcgagcttctctatttattttcttctgtgtctccagttgcttctgatataatgaatatgctcttgaagcaaattgtttctctgcttctctttctccagtg aattgtttgttgtattataaacgaggtttaggaattgggttaataatattggaggattgtgtttgtattctgtgtccgacgaacaaatgacatttccgat ttctattgtgctacgagctcagtgtttagaagggttttgatgttctctattgaatattcatgttatgttagtttgatgattagatgattttgctttgcaa ttactgtgtttttttgtctgactggctctgatattatacaacgtgtttgactccgattggtatcaatcttcttcttcgtcttcagaagcATGGTGTTTGG ACAAGTAGTAATAGGTCCTCCAGGATCGGGAAAGACCACTTATTGCAATGGAATGTCTCAGTTCCTCTCTCTAATGGGCAGgtttcatgttctttctctt ctcttctctttttggatcaaagaatgaagcttacttggcttttgtatctgtaattctgtttgtattgattgtttcgctgtccctcgca►ttg◄taaagtt tacaag►ttgcaaactttagtaaataatagtgttgaattccagaaa◄tttgaattgtctgacttttgagcagagtcattgtgaaatgttgttgccttgtc tttgtttttggtagagagatttgcagattcgtgagaacttctctgtaagtaaattctcttaacgttgagttactattttgttgttgttgcagGAAGGTTG CTATTGTTAATCTGGATCCTGCAAATGATGCATTACCgtatccttttcaagccaaatacaacaaaattgttaaaaattgcaggtgtatgttgtttcttga cattgattttagTTATGAGTGTGGTGTGAATATAGAAGAATTGATCAAGTTAGAAGATGTTATGTCGGAACACTCGCTTGGTCCTAATGGAGgtgaattt tgccatcttgattttcccttttcttcttacttttgattttaatctttggtcaaattaacaaagaaactttctaatgtgacagGTCTTGTATATTGTATGG AGTACTTGGAGAAAAACATTGACTGGCTGGAATCTAAACTAAAGCCTCTTCTGAAGGgttagcaacgatatgtcccttcttcttcttcttcttttcgtgg tcataatatctctttcttaaagtaaaacgttttgaattgtttgcagATCATTACATTCTCTTTGATTTTCCTGGCCAAGTGGAATTGTTCTTCATTCATG ACAGTACCAAGAATGTTCTCACGAAGCTGATTAAATCATTGAACCTTAGAgtatgtgctttacttcacttattactaacttgctaaatgaaccttactta ggagtctacatatctgatgaatttctttgttctgcagTTAACTGCTGTGCAACTAATTGATTCCCATCTATGTTGTGATCCCGGGAACTACGTAAGTTCG CTACTTCTCTCCTTATCCACAATGCTTCACATGGAACTCCCACATGTCAATGTATTGTCTAAAATCGATCTGATTGGAAGCTACGGGAAGCTAGgtatta ataatctatctatggttttgttctcataacatcgaattttcaaatgtatactgtggactcactaactaggatctctgtgcatgtagCTTTCAATTTAGAT TTCTATACCGATGTTCAAGACTTGTCATACTTGGAGCACCATCTTAGTCAAGATCCTCGCTCTGCTAAGTACAGgttcgatgtaaacatcatctgaatac acattgaacggttaataattatccatttagaagcatgctcaatatctcatgagcttgatgtttctcattgcagAAAACTAACAAAAGAGCTATGTAGTGT CATTGAAGATTACAGTCTTGTTAATTTTACAACCTTGGATATTCAGgtttgcgatttcctttacctctctctctctttctctctgtacaagcatcttttc gcaattttcttttttgttttcagGATAAAGAAAGTGTTGGGGATCTAGTAAAGCTCATCGACAAGAGCAATGGATACATATTTGCCGGCATTGATGCAAG TGTGGTTGAATACAGCAAGATTGCAATTGGTCAAACTGATTGGGATTATAACAGATATCCTTTTTTAGCATTTTGGATTTCTTAAccattacttctctca ataactcttgagtttagttttacgtctactacaaaagaattgtttctttgacgatagtcttcacagtcgcagctgtacaggagaagtacatggaagatga ggaaatacaagactgagaacagtgcttgaaactttatatagaagagagctggtttaaaatatctctgaaccaaaccatttgacggtttgtatgaaccttt ttgtgtatttttgagttcggtttaagtctaaacaacattgatttacacaacttcctggtttggttcactggattatgctaattttccagacgactaactt tctgccaaattttgtctttagacttttgagtttctgaatcacacgtgcccatgactccaacattctctagaaaacatctcaaatgtcactgtctaggtca ttta
Border_1 (35154_RBD)
ATTAGGCACCCCAGGCTTTACACTTTATGCTTCCGGCTCGTATGTTGTGTGGAATTGTGAGCGGATAACAATTTCACACAGGAAACAGCTATGACCATGA
TTACGCCAAGCTCGAAATTAACCCTCACTAAAGGGAACAAAAGCTGGAGCTCGCTTGAGCTTGGATCAGATTGTCGTTTCCCGCCTTCAGTTTAAAAATT
GACGCTGTTTGTATTATTTCACAATCAATGCGAGGGACAGCGAAACAATCAATACAAACAGAATTACAGATACAAAAGCCAAGTAAGCTTCATTCTTTGA
TCCAAAAAGAGAAGAGAAGAGAAAGAACATGAAACCTGCCCATTAGAGAGAGGAACTGAGACATTCCATTGCAATAAGTGGTCTTTCCCGATCCTGGAGG
ACCTATTACTACTTGTCCAAACACCATGCTTCTGAAGACGAAGAAGAAGATTGATACCAATCGGAGTCAAACACGTTGTATAATATCAGAGCCAGTCAGA
CAAAAAAACACAGTAATTGCAAAGCAAAATCATCTAATCATCAAACTAACATAACATGAATATTCAATAGAGAACATCAAAACCCTTCTAAACACTGAGC
TCGTAGCACAATAGAAATCGGAAATGTCATTTGTTCGTCGGACACAGAATACAAACACAATCCTCCAATATTATTAACCCAATTCCTAAACCTCGTTTAT
AATACAACAAACAATTCACTGGAGAAAGAGAAGCAGAGAAACAATTTGCTTCATGAGCATATTCATTATATCAGACGCAACTGGAGACACANNAGAANAT
AAATAGAGANGCTCGCCTGTGTAGTTAGCCGGAGAGAGAAGCAATGACC
| Start of BLAST Alignment: | NT 254 / Intron 2 of 9 (Intron 1 at 5’ UTR) |
| First 15 bp Perfect Match: | NT 202 / Intron 2 of 9 (Intron 1 at 5’ UTR) |
BLAST Details: Query Sequence: 35154_RBD Length: (849 letters) Database: Genes from AGI, Total Genome (DNA); Smallest Sum High Probability Sequences producing High-scoring Segment Pairs: Score P(N) N At5g22370 68418.t02367 ATP-binding family protein contain... 3077 1.3e-134 1 At1g78380 68414.t08352 glutathione S-transferase, putativ... 218 0.18 1 At2g19260 68415.t02133 ELM2 domain-containing protein / P... 210 0.44 1 At5g48720 68418.t05599 expressed protein 204 0.63 1 >At5g22370 68418.t02367 ATP-binding family protein contains Pfam domain, PF03029: Conserved hypothetical ATP binding protein Length = 2268 Minus Strand HSPs: Score = 3077 (467.7 bits), Expect = 1.3e-134, P = 1.3e-134 Identities = 643/675 (95%), Positives = 643/675 (95%), Strand = Minus / Plus Query: 848 GTCATTGCTTCTCTCTCCGGCTAACTACACAGGCGAGCNTCTCTATTTATNTTCTNNTGT 789 |||||||||||||||||||||||||||||||||||||| ||||||||||| |||| ||| Sbjct: 56 GTCATTGCTTCTCTCTCCGGCTAACTACACAGGCGAGCTTCTCTATTTATTTTCTTCTGT 115 Query: 788 GTCTCCAGTTGCGTCTGATATAATGAATATGCTCATGAAGCAAATTGTTTCTCTGCTTCT 729 |||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 116 GTCTCCAGTTGCTTCTGATATAATGAATATGCTCTTGAAGCAAATTGTTTCTCTGCTTCT 175 Query: 728 CTTTCTCCAGTGAATTGTTTGTTGTATTATAAACGAGGTTTAGGAATTGGGTTAATAATA 669 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 176 CTTTCTCCAGTGAATTGTTTGTTGTATTATAAACGAGGTTTAGGAATTGGGTTAATAATA 235 Query: 668 TTGGAGGATTGTGTTTGTATTCTGTGTCCGACGAACAAATGACATTTCCGATTTCTATTG 609 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 236 TTGGAGGATTGTGTTTGTATTCTGTGTCCGACGAACAAATGACATTTCCGATTTCTATTG 295 Query: 608 TGCTACGAGCTCAGTGTTTAGAAGGGTTTTGATGTTCTCTATTGAATATTCATGTTATGT 549 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 296 TGCTACGAGCTCAGTGTTTAGAAGGGTTTTGATGTTCTCTATTGAATATTCATGTTATGT 355 Query: 548 TAGTTTGATGATTAGATGATTTTGCTTTGCAATTACTGTGTTTTTTTGTCTGACTGGCTC 489 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 356 TAGTTTGATGATTAGATGATTTTGCTTTGCAATTACTGTGTTTTTTTGTCTGACTGGCTC 415 Query: 488 TGATATTATACAACGTGTTTGACTCCGATTGGTATCAATCTTCTTCTTCGTCTTCAGAAG 429 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 416 TGATATTATACAACGTGTTTGACTCCGATTGGTATCAATCTTCTTCTTCGTCTTCAGAAG 475 Query: 428 CATGGTGTTTGGACAAGTAGTAATAGGTCCTCCAGGATCGGGAAAGACCACTTATTGCAA 369 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 476 CATGGTGTTTGGACAAGTAGTAATAGGTCCTCCAGGATCGGGAAAGACCACTTATTGCAA 535 Query: 368 TGGAATGTCTCAGTTCCTCTCTCTAATGGGCAGGTTTCATGTTCTTTCTCTTCTCTTCTC 309 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 536 TGGAATGTCTCAGTTCCTCTCTCTAATGGGCAGGTTTCATGTTCTTTCTCTTCTCTTCTC 595 Query: 308 TTTTTGGATCAAAGAATGAAGCTTACTTGGCTTTTGTATCTGTAATTCTGTTTGTATTGA 249 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 596 TTTTTGGATCAAAGAATGAAGCTTACTTGGCTTTTGTATCTGTAATTCTGTTTGTATTGA 655 Query: 248 TTGTTTCGCTGTCCCTCGCATTG-ATTGTGAAATAATA-CAAACAGC-GTCAATTTTTAA 192 ||||||||||||||||||||||| | || | | | ||||| || ||| | Sbjct: 656 TTGTTTCGCTGTCCCTCGCATTGTAAAGTTTACAAGTTGCAAACTTTAGTAAATAATAGT 715 Query: 191 ACTGAAGGCGGGAAA 177 |||| | |||| Sbjct: 716 GTTGAATTCCAGAAA 730 >At1g78380 68414.t08352 glutathione S-transferase, putative similar to glutathione transferase GI:2853219 from [Carica papaya] Length = 1494 Minus Strand HSPs: Score = 218 (38.8 bits), Expect = 0.20, P = 0.18 Identities = 240/421 (57%), Positives = 240/421 (57%), Strand = Minus / Plus
Border_2 (35154_LBU)
GCCTTTTCAGAAATGGATAAATAGCCTTGCTTCCTATTATATCTTCCCAAATTACCAATACATTACACTAGCATCTGAATTTCATAACCAATCTCGATAC
ACCAAATCGAATTCAATTCGGCGTTAATTCAGTACATTAAAAACGTCCGCAATGTGTTATTAAGTTGTCTAAGCGTCAATTTGTTTACACCACAATATAT
CCTGAAATAATACAAACAGCGATTATCTGTTTGTAATTTGTCTAAGCGTCATTTGCAAACTTTAGTAAATAATAGTGTTGAATTCCAGAAATTTGAATTG
TCTGACTTTTGAGCAGAGTCATTGTGAAATGTTGTTGCCTTGTCTTTGTTTTTGGTAGAGAGATTTGCAGATTCGTGAGAACTTCTCTGTAAGTAAATTC
TCTTAACGTTGAGTTACTATTTTGTTGTTGTTGCAGGAAGGTTGCTATTGTTAATCTGGATCCTGCAAATGATGCATTACCGTATCCTTTTCAAGCCAAA
TACAACAAAATTGTTAAAAATTGCAGGTGTATGTTGTTTCTTGACATTGATTTTAGTTATGAGTGTGGTGTGAATATAGAAGAATTGATCAAGTTAGAAG
ATGTTATGTCGGAACACTCGCTTGGTCCTAATGGAGGTGAATTTTGCCATCTTGATTTTCCCTTTTCTTCTTACTTTTGATTTTAATCTTTGGTCAAATT
AACAAAGAAACTTTCTAATGTGACAGGTCTTGTATATTGTATGGAGTACTTGGAGAAAAACATTGACCTGGCTGGAATCTAAACTAAAGCCTCTTCTGAA
GGGTTAGCAACGATATGTCCCTTCTTCTTCTTCTTCT
| Start of BLAST Alignment: | NT 199 / Intron 2 of 9 (Intron 1 at 5’ UTR) |
| First 15 bp Perfect Match: | NT 215 / Intron 2 of 9 (Intron 1 at 5’ UTR) |
BLAST Details: Query Sequence: 35154_LBU Length: (837 letters) Database: Genes from AGI, Total Genome (DNA); Smallest Sum High Probability Sequences producing High-scoring Segment Pairs: Score P(N) N At5g22370 68418.t02367 ATP-binding family protein contain... 2914 2.9e-127 1 At2g41490 68415.t04704 UDP-GlcNAc:dolichol phosphate N-ac... 241 0.018 1 At5g30450 68418.t03415 CACTA-like transposase family (Ptt... 240 0.021 1 At3g29180 68416.t03326 expressed protein 237 0.030 1 >At5g22370 68418.t02367 ATP-binding family protein contains Pfam domain, PF03029: Conserved hypothetical ATP binding protein Length = 2268 Plus Strand HSPs: Score = 2914 (443.3 bits), Expect = 2.9e-127, P = 2.9e-127 Identities = 594/602 (98%), Positives = 594/602 (98%), Strand = Plus / Plus Query: 238 TTGTCTAAGCGT-CAT-TTGCAAACTTTAGTAAATAATAGTGTTGAATTCCAGAAATTTG 295 |||| ||| | || ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 676 TTGTA-AAGTTTACAAGTTGCAAACTTTAGTAAATAATAGTGTTGAATTCCAGAAATTTG 734 Query: 296 AATTGTCTGACTTTTGAGCAGAGTCATTGTGAAATGTTGTTGCCTTGTCTTTGTTTTTGG 355 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 735 AATTGTCTGACTTTTGAGCAGAGTCATTGTGAAATGTTGTTGCCTTGTCTTTGTTTTTGG 794 Query: 356 TAGAGAGATTTGCAGATTCGTGAGAACTTCTCTGTAAGTAAATTCTCTTAACGTTGAGTT 415 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 795 TAGAGAGATTTGCAGATTCGTGAGAACTTCTCTGTAAGTAAATTCTCTTAACGTTGAGTT 854 Query: 416 ACTATTTTGTTGTTGTTGCAGGAAGGTTGCTATTGTTAATCTGGATCCTGCAAATGATGC 475 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 855 ACTATTTTGTTGTTGTTGCAGGAAGGTTGCTATTGTTAATCTGGATCCTGCAAATGATGC 914 Query: 476 ATTACCGTATCCTTTTCAAGCCAAATACAACAAAATTGTTAAAAATTGCAGGTGTATGTT 535 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 915 ATTACCGTATCCTTTTCAAGCCAAATACAACAAAATTGTTAAAAATTGCAGGTGTATGTT 974 Query: 536 GTTTCTTGACATTGATTTTAGTTATGAGTGTGGTGTGAATATAGAAGAATTGATCAAGTT 595 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 975 GTTTCTTGACATTGATTTTAGTTATGAGTGTGGTGTGAATATAGAAGAATTGATCAAGTT 1034 Query: 596 AGAAGATGTTATGTCGGAACACTCGCTTGGTCCTAATGGAGGTGAATTTTGCCATCTTGA 655 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1035 AGAAGATGTTATGTCGGAACACTCGCTTGGTCCTAATGGAGGTGAATTTTGCCATCTTGA 1094 Query: 656 TTTTCCCTTTTCTTCTTACTTTTGATTTTAATCTTTGGTCAAATTAACAAAGAAACTTTC 715 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1095 TTTTCCCTTTTCTTCTTACTTTTGATTTTAATCTTTGGTCAAATTAACAAAGAAACTTTC 1154 Query: 716 TAATGTGACAGGTCTTGTATATTGTATGGAGTACTTGGAGAAAAACATTGACCTGGCTGG 775 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 1155 TAATGTGACAGGTCTTGTATATTGTATGGAGTACTTGGAGAAAAACATTGAC-TGGCTGG 1213 Query: 776 AATCTAAACTAAAGCCTCTTCTGAAGGGTTAGCAACGATATGTCCCTTCTTCTTCTTCTT 835 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1214 AATCTAAACTAAAGCCTCTTCTGAAGGGTTAGCAACGATATGTCCCTTCTTCTTCTTCTT 1273 Query: 836 CT 837 || Sbjct: 1274 CT 1275 >At2g41490 68415.t04704 UDP-GlcNAc:dolichol phosphate N-acetylglucosamine-1-phosphate transferase identical to GI:5804772 Length = 2517 Plus Strand HSPs: Score = 241 (42.2 bits), Expect = 0.019, P = 0.018 Identities = 225/386 (58%), Positives = 225/386 (58%), Strand = Plus / Plus