At4g10760 SYNGENTA 35345
Genomic Sequence (from TAIR)
agagcttcgatttttagggttaacggttcacctctgctatattttttttatcagaattcaactccaacaaactaaatcactttccgtgataaagaaaaga aaagtgcaaaaatttggattttgttgatccaaaataaaatacaaagaactgaaatcttaaaatcatatactaaactagttgttatttgtaaatttcttat aaccctttcttacatttttaaattaccctacatataactttttcttacatttttaaaatatcctacaattatctaactaaacacccaaaaatatttttac cgttttatgttatcaacttatcatcgtgtccgacaaaaaaaaaaaaacttatcatcgtgctcctttacatttttcgtgacctaaaactgctacgacatcg ttttagtgacttacttgctaaaaccctttttaactttctttcaagctaaagacctgcacaaactctctctcgaattcttttgtttcgaagccATGGAAAC TGAATCTGATGACGCCACCATTACCGTCGTCAAAGACATGAGAGTTCGATTAGAGAATCGAATTCGAACCCAACACGACGCTCACTTAGATCTCCTTTCC TCACTCCAATCCATTGTTCCCGATATAGTCCCATCTCTCGATCTCTCACTCAAACTCATCTCTTCTTTCACGAATCGACCTTTCGTAGCTACACCACCAT TACCAGAACCCAAAGTTGAGAAGAAGCATCATCCGATTGTTAAATTAGGAACCCAACTGCAACAATTACATGGGCATGA◄TTCAAAATCGATGCTTGTTG ATTCGAAT►CAGAGAGATGCTGAAGCTGATGGGTCTAGTGGGAGTCCTATGGCGCTTGTTAGAGCTATGGTTGCTGAGTGTTTGCTTCAACGTGTACCGT TTTCTCCTACGGATTCTTCTACTGTGCTTAGGAAGCTTGAGAATGACCAGAATGCTAGACCGGCGGAGAAGGCGGCGTTACGAGATTTAGGCGGTGAATG TGGACCGATTCTTGCGGTGGAGACCGCACTTAAATCGATGGCGGAAGAGAATGGTTCTGTGGAATTGGAAGAGTTTGAGGTTAGTGGGAAGCCTAGGATC ATGGTTTTAGCTATAGATAGAACTAGATTGCTTAAAGAGTTACCAGAGAGTTTCCAAGGGAATAACGAATCGAATCGGGTTGTCGAAACGCCTAATTCAA TTGAGAATGCTACTGTTTCTGGTGGCGGGTTTGGTGTTTCCGGGTCGGGTAATTTCCCGAGACCTGAGATGTGGGGAGGTGATCCTAATATGGGGTTTAG GCCAATGATGAATGCACCAAGAGGAATGCAAATGATGGGAATGCATCATCCAATGGGGATAATGGGTAGACCACCACCATTTCCTTTGCCTTTGCCGTTG CCTGTACCGTCGAATCAGAAGCTTAGAAGTGAGGAAGAGGATTTGAAAGATGTTGAGGCTCTTTTGAGTAAGAAGTCTTTTAAGGAGAAGCAACAGTCTA GGACAGGTGAGGAGTTGCTTGATCTGATTCACCGTCCAACCGCTAAAGAAGCCGCTACTGCTGCTAAGgtgaactcagttaactatagtctttagttaaa tacatgcttttttaatacaaaactatatgtgaatgtaaatgtgagtatataagctttcaaaaggaattgaggaggaaaacacatagtgtagttcacagca gactagataagttgttgatccaaagctgtgttaatttggcgtagatagcggattagatagtgtatgattcgtgaacaagttctggagaaagctattagcc atcttagtagttagtatccatagtagtttgttatcaagattataggggagcagatactatgccattttgtgaaaagcagtagggtgaaaagcaaagagct atataacttagatgtgtgtttcttcggtttggatgctgatagtgatgctcctatgtggccatatgttctgaaagcaaggagccttctattgaaaataatc accttacggatctagatgcttaatgtttataagcgtgtttaactagttatcacaacacttgtgtgttttgtctctcagtgtggggtggggttgaaagttt ttgatacatagtttctactttctagtttcaatatcgatgtagcgaaagcaaagatctctttccacaaaacttgtgtgtttgttgtgactttctctcttgg tatcttgtgagacctgtcactgtttctagcctcaactcttctaggtgttatgttttgttagttttcatttcatcttctaataaacagcttggatcttgtg attgactgttatatttttatgttccttacagTTTAAAAGCAAAGGAGGATCACAGGTTAAGTATTACTGTAGGTATTTAACTAAAGAGGATTGCCGTCTT CAGTCTGGTTCTCACATAGCCTGCAACAAGgtttgaaccaactcaaatttacaatgtacatcttatttgataggaaattcagaatgttatattgttaaga attccatagcgaacaaattaggattggtttgcatgtcaagttttttgtttgttattttgtgaggtttatattgatctcctgctatggtgtctatgttgct ttgctgaaatctacttagtttttatgaattctgtatactttcagAGACATTTCCGTCGACTAATCGCTTCACATACTGACGTTAGCCTAGGAGATTGTTC CTTTCTCGATACTTGTCGTCACATGAAGgtaacttttttttggtcacaattgtgtgatagtacttcggttaagtgtagatatatggtaacagagcaacca ttattttgaatttggacagACTTGCAAATACGTGCATTACGAGCTCGACATGGCTGACGCTATGATGGCTGGTCCAGATAAGGCATTGAAGCCTCTACGT GCTGATTACTGTTCTGAAGCTGAACTTGGTGAGGCACAATGGATTAACTGTGACATCCGTTCTTTTCGAATGGACATTTTGGGAACCTTTGGAGTTGTTA TGGCGGATCCACCATGGGACATTCACATGGAACTTCCATATGGAACAATGGCTGATGACGAAATGCGAACTCTTAATGTTCCCTCGTTACAGACTGACGG TTTGATTTTCCTCTGGGTCACTGGTCGTGCTATGGAACTAGGCCGTGAATGgtacttagaaaaatctcaacaaattttgtgttcatgtgcttttccactc taatggagttttttttttttttttaagTTTGGAGCTTTGGGGATACAAGCGAGTGGAAGAGATCATATGGGTAAAGACAAATCAACTTCAACGTATTATT CGAACAGGAAGAACAGGTCACTGGCTCAACCATAGCAAAGAGCATTGTCTGGTTGGAATCAAAGGAAATCCAGAAGTGAACAGAAACATCGACACAGATG TGATTGTCGCAGAGGTTAGAGAAACAAGCCGGAAGCCAGACGAGgtttgtccataattacccacatttttccaaatcgtttcgaattagtatgattctgg actcttgtgtgatgagaatgcttgtcaaccaccagATGTATGCAATGTTAGAGAGGATCATGCCAAGAGCAAGAAAGCTCGAGTTATTCGCCCGTATGCA CAATGCTCATGCCGGgtaaagtttttgaccttttaactgtcatatgatattgttgtcatgaatcttatgagtctactgttggttatagATGGCTATCACT TGGGAACCAGCTTAACGGTGTCCGATTAATAAACGAAGGTCTTCGAGCTCGGTTTAAAGCATCATACCCTGAAATAGATGTCCAGCCACCATCACCACCA AGAGCCTCTGCAATGGAAACAGACAACGAACCAATGGCTATTGACTCAATCACAGCTTAGttcaattccaaaaaaaacaaagccaaatgtctcagctttg ttggattcatgttgctttcgtttttgaaacatttgtggcatcatgattttgtaaatctttatggaaagttaaaaggaaacaacattaacgaaatttgaaa ttttgcttattcgctccagtacttctcatcatcaacatctttatcatgttccgacgaatcctcactgtccgattcattgaccaaacccatcttgaatctc ctcacatcttcaacagcagcattcctaaacaatccaacatcaacagctccggcgaccatatggtaaccacgtccccgaatctcaccagctccgtcgtgcg gcatcgcgaaacccgacaagtaagccccgcctttcgccggatcagtggtcagcacagatttctcagccttcttcatcatctctctcactttcttatgtcc aggatcccacaaataccctaaactcgcactaagatccaacggtcccatttgcacacagtcaacaccatcaacggctgcgatttcatcagctttcttcact ccttcacctgattccacctggcacataatcagaatctcctctgcgtaattacttaaatacccttcatcgattccgtagttagaagctctcaccaccgtgt gc
Border_1 (35345_LB2)
TCATGCCCATGTAATTGTTGCAGTTGGGTTCCTAATTTAACAATCGGATGATGCTTCTTCTCAACTTTGGGTTCTGGTAATGGTGGTGTAGCTACGAAAG
GTCGATTCGTGAAAGAAGAGATGAGTTTGAGTGAGAGATCGAGAGATGGGACTATATCGGGAACAATGGATTGGAGTGAGGAAAGGAGATCTAAGTGAGC
GTCGTGTTGGGTTCGAATTCGATTCTCTAATCGAACTCTCATGTCTTTGACGACGGTAATGGTGGCGTCATCAGATTCAGTTTCCATGGCTTCGAAACAA
AAGAATTCGAGAGAGAGTTTGTGCAGGTCTTTAGCTTGAAAGAAAGTTAAAAAGGGTTTTAGCAAGTAAGTCACTAAAACGATGTCGTAGCAGTTTTAGG
TCACGAAAAATGTAAAGGAGCACGATGATAAGTTTTTTTTTTTT
| Start of BLAST Alignment: | NT 287 / Exon 1 of 7 |
| First 15 bp Perfect Match: | NT 287 / Exon 1 of 7 |
BLAST Details: Query Sequence: 35345_LB2 Length: (444 letters) Database: Genes from AGI, Total Genome (DNA); Smallest Sum High Probability Sequences producing High-scoring Segment Pairs: Score P(N) N At4g10760 68417.t01671 methyltransferase MT-A70, putative... 1630 2.6e-68 1 At3g21865 68416.t02466 expressed protein 188 0.70 1 At1g47870 68414.t04875 E2F transcription factor-2 (E2F2) ... 185 0.83 1 At2g16940 68415.t01852 RNA recognition motif (RRM)-contai... 172 0.9998 1 >At4g10760 68417.t01671 methyltransferase MT-A70, putative similar to (N6-adenosine)-methyltransferase [Mus musculus] GI:10179948, m6A methyltransferase (MT-A70) [Homo sapiens] GI:2460037; contains Pfam profile PF05063: MT-A70 (S-adenosylmethionine-binding subunit of human mRNA:m6A methyl-transferase (MTase)) Length = 3868 Minus Strand HSPs: Score = 1630 (250.6 bits), Expect = 2.6e-68, P = 2.6e-68 Identities = 326/326 (100%), Positives = 326/326 (100%), Strand = Minus / Plus Query: 326 CTGCACAAACTCTCTCTCGAATTCTTTTGTTTCGAAGCCATGGAAACTGAATCTGATGAC 267 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 CTGCACAAACTCTCTCTCGAATTCTTTTGTTTCGAAGCCATGGAAACTGAATCTGATGAC 60 Query: 266 GCCACCATTACCGTCGTCAAAGACATGAGAGTTCGATTAGAGAATCGAATTCGAACCCAA 207 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 GCCACCATTACCGTCGTCAAAGACATGAGAGTTCGATTAGAGAATCGAATTCGAACCCAA 120 Query: 206 CACGACGCTCACTTAGATCTCCTTTCCTCACTCCAATCCATTGTTCCCGATATAGTCCCA 147 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 CACGACGCTCACTTAGATCTCCTTTCCTCACTCCAATCCATTGTTCCCGATATAGTCCCA 180 Query: 146 TCTCTCGATCTCTCACTCAAACTCATCTCTTCTTTCACGAATCGACCTTTCGTAGCTACA 87 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 TCTCTCGATCTCTCACTCAAACTCATCTCTTCTTTCACGAATCGACCTTTCGTAGCTACA 240 Query: 86 CCACCATTACCAGAACCCAAAGTTGAGAAGAAGCATCATCCGATTGTTAAATTAGGAACC 27 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 CCACCATTACCAGAACCCAAAGTTGAGAAGAAGCATCATCCGATTGTTAAATTAGGAACC 300 Query: 26 CAACTGCAACAATTACATGGGCATGA 1 |||||||||||||||||||||||||| Sbjct: 301 CAACTGCAACAATTACATGGGCATGA 326 >At3g21865 68416.t02466 expressed protein Length = 2190 Minus Strand HSPs: Score = 188 (34.3 bits), Expect = 1.2, P = 0.70 Identities = 112/190 (58%), Positives = 112/190 (58%), Strand = Minus / Plus
Border_2 (35345_LB1)
TCCCACATCTCAGGTCTCGGGAAATTACCCGACCCGGAAACACCAAACCCGCCACCAGAAACAGTAGCATTCTCAATTGAATTAGGCGTTTCGACAACCC
GATTCGATTCGTTATTCCCTTGGAAACTCTCTGGTAACTCTTTAAGCAATCTAGTTCTATCTATAGCTAAAACCATGATCCTAGGCTTCCCACTAACCTC
AAACTCTTCCAATTCCACAGAACCATTCTCTTCCGCCATCGATTTAAGTGCGGTCTCCACCGCAAGAATCGGTCCACATTCACCGCCTAAATCTCGTAAC
GCCGCCTTCTCCGCCGGTCTAGCATTCTGGTCATTCTCAAGCTTCCTAAGCACAGTAGAAGAATCCGTAGGAGAAAACGGTACACGTTGAAGCAAACACT
CAGCAACCATAGCTCTAACAAGCGCCATAGGACTCCCACTAGACCCATCAGCTTCAGCATCTCTCTG
| Start of BLAST Alignment: | NT 315 / Exon 1 of 7 |
| First 15 bp Perfect Match: | NT 315 / Exon 1 of 7 |
| Reverse Complement |
BLAST Details: Query Sequence: 35345_LB1 Length: (467 letters) Database: Genes from AGI, Total Genome (DNA); Smallest Sum High Probability Sequences producing High-scoring Segment Pairs: Score P(N) N At4g10760 68417.t01671 methyltransferase MT-A70, putative... 2330 4.1e-101 1 >At4g10760 68417.t01671 methyltransferase MT-A70, putative similar to (N6-adenosine)-methyltransferase [Mus musculus] GI:10179948, m6A methyltransferase (MT-A70) [Homo sapiens] GI:2460037; contains Pfam profile PF05063: MT-A70 (S-adenosylmethionine-binding subunit of human mRNA:m6A methyl-transferase (MTase)) Length = 3868 Minus Strand HSPs: Score = 2330 (355.6 bits), Expect = 4.1e-101, P = 4.1e-101 Identities = 466/466 (100%), Positives = 466/466 (100%), Strand = Minus / Plus Query: 467 CAGAGAGATGCTGAAGCTGATGGGTCTAGTGGGAGTCCTATGGCGCTTGTTAGAGCTATG 408 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 355 CAGAGAGATGCTGAAGCTGATGGGTCTAGTGGGAGTCCTATGGCGCTTGTTAGAGCTATG 414 Query: 407 GTTGCTGAGTGTTTGCTTCAACGTGTACCGTTTTCTCCTACGGATTCTTCTACTGTGCTT 348 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 415 GTTGCTGAGTGTTTGCTTCAACGTGTACCGTTTTCTCCTACGGATTCTTCTACTGTGCTT 474 Query: 347 AGGAAGCTTGAGAATGACCAGAATGCTAGACCGGCGGAGAAGGCGGCGTTACGAGATTTA 288 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 475 AGGAAGCTTGAGAATGACCAGAATGCTAGACCGGCGGAGAAGGCGGCGTTACGAGATTTA 534 Query: 287 GGCGGTGAATGTGGACCGATTCTTGCGGTGGAGACCGCACTTAAATCGATGGCGGAAGAG 228 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 535 GGCGGTGAATGTGGACCGATTCTTGCGGTGGAGACCGCACTTAAATCGATGGCGGAAGAG 594 Query: 227 AATGGTTCTGTGGAATTGGAAGAGTTTGAGGTTAGTGGGAAGCCTAGGATCATGGTTTTA 168 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 595 AATGGTTCTGTGGAATTGGAAGAGTTTGAGGTTAGTGGGAAGCCTAGGATCATGGTTTTA 654 Query: 167 GCTATAGATAGAACTAGATTGCTTAAAGAGTTACCAGAGAGTTTCCAAGGGAATAACGAA 108 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 655 GCTATAGATAGAACTAGATTGCTTAAAGAGTTACCAGAGAGTTTCCAAGGGAATAACGAA 714 Query: 107 TCGAATCGGGTTGTCGAAACGCCTAATTCAATTGAGAATGCTACTGTTTCTGGTGGCGGG 48 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 715 TCGAATCGGGTTGTCGAAACGCCTAATTCAATTGAGAATGCTACTGTTTCTGGTGGCGGG 774 Query: 47 TTTGGTGTTTCCGGGTCGGGTAATTTCCCGAGACCTGAGATGTGGG 2 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 775 TTTGGTGTTTCCGGGTCGGGTAATTTCCCGAGACCTGAGATGTGGG 820