At3g05680 SYNGENTA 36492
Genomic Sequence (from TAIR)
ttgtcactggaaggtgaatgataagaaacctaaatttgtgtagaaaatctgaataacccaaacttgaaactgtaacaaaaaactgaactttgcagacatg atatttcgatccagtggtttcgatgaaatgtccagagtccagactctaaagttcagcttctttatcattaataaactttagtcactttcagagaaatcta gattttgagtcaattcgtcttctagaaacaaaaatagtgaagcaatattgttagctgaaccacttgtagttagattttcagctaaaatgccagctttata ttctttgtgagtgacttaatgtctgacaacatttcttgagcgtgggtgATGTCTATGGTTCGTTATCTCAACGTTGACAATATTTTCGTTAGGGCAACTT CACCTCCTTCATTTGCGTTGGAAGTGTTCGTTCGATGTGAAGGAGAATCAAAGTTTAAGCGACTTTGTAATCCTTTTCTTTACACTCCTTCAGCGCCCTA CCCTTTGGAAGTGGAGgtaactactaaacttgatttatcttcagactgatttttgtttcttttctttttggttcttggtattgattagtttggtattctg caactgatgctggtaacaacatttgggaatggttcttatgtacatttcctgtccttagaccagagtaattggctaccataattcagattcctttgggaac aaggagctgttagctggaaatatggcttacagctgtacatactcccctagagatgtgtatattagtttatatgtaaattgctgggtcatatctgtcttcg gataataggggttatgacataatagaaggattaaataacctgttgtaggtggtaaggggtttaatttgggttgagaatgaaaggagtttagagaattgaa aaccttttaattaggcaatcttgtgtgtcaaaaggcaaacgttcagcctccctctatgccaccagaaaagtgctcaatcatttacatttgcaggtttcag ttccttgctttacttgactcttctcatcaaaattgcagGCTGTTGTAACAAACCATCTGGTGGTCAGAGGTAGCTATCGAAGTTTGAGCTTGATCGTCTA TGGGAACATCGTCAAAGATTTGGGGCAGTACAATATCATTCTTGAAGGTCGTTCTGTAACTGATATTGTGAGTTCCACTGAGGGTAATCTTGAGGACTTG CCATTGGTATTGCACTCAGTTAACAGAACAATAGAGGAATGTCTATCCTCTCTAGACATAGTATCTCTCCCCCTGGCTGCTGTAGATTTGCCGGTGGAAG TAAAGCGATTGTTGCAGCTGCTGCTAAAAATCTTTGATAAGCTAGCTACTAATGATGTAGTAAATAAATTTGTGGATACGGTAGTGTCTGGGGTCTCCTC GTATGTCACAGACAATGTAGATTTCTTTTTAAAGAATAAGAATTGTTCGGCTGTGACCAGTTCCCTAGATTCTGGGTTATTCCATGATATAGTTGACAGG GTTAAGGAAGATATTCTTGATCTCAATGAAATTCAAGAATCAGATGTGGCACTTGGATTGTTCAGCTTTCTTGAATCAGAGACTTATTTGGCTACTTCCC AACAATTGGTTGTTATGTTGAGCCCATATATTCAGTTTGAAAGAGATTCCTTATGTACTGTCCTTCCAAAACTTTCAAAGgtattacattttctttttag ctctcacacgctggtgatagaaatttctaatattaatagattaattgttgttaattttctcatttcagGGGAAAGCCACTCTTTTAGGTTTAAGTTTGGC CTTCTTATTATGCTCTGGCCGAGAAGGCTGCCTCCAATTTGTCAATTCGGGTGGGATGGATCAACTTGTATATTTGTTTGGTCATGATGGTCAGAATTCT ACCACCATTACTTTGCTGTTGCTTGGAGTTGTTGAGCAGGCTACACGCCATTCAGTTGGGTGTGAAGGATTTTTAGGTTGGTGGCCTCGTGAGGATGGAA GTATCCCATCTGGTAAGAGTGAGGGCTACTGTCTTCTGTTGAAATTACTTATGCAGAAACCATGCCATGAGATTGCCTCTCTTGCAATTTATATTCTTCG TCGTTTGAGAATTTACGAGGTTATATCAAGATATGAGgtactctccatatcaagaatcttgtgttgtttggcattatgttgataggccctttatgttaat attgttattaatattctgtctatcagTTTGCAGTGTTGTCAGCACTGGAAGGTCTCTCTAATTCTCATGGGGCTGCAACTCATAATCTGAATATGCTATC TGATGCTAAGTCACAACTTCAAAAGCTCCAGgtttgtttctgcttttaatttcatgtgatttgctcgcttatacaatcagtaaaccaacaatttaacatt ctaactggtgttactgctgactatcaattcagAACCTGATGAAGTCACTTGGATCAGTTGAAGATCCCTCACCATCAGCCTACGCAGAAAGAAGTTTGGT TTCTGATCATTCTGAAGGGTGGTTGTCATACAAAGCCACAAGTAAACTAACTTCTTCATGGACATGTCCCTTTTATAGCTCTGGAATTGATTCGCACATA TTGGCACTTCTGAAGgtaaatcatttgattaaattagtcttttgacttagacatttatgcactattttagttgctaaatatgctgtgtgtcagaatggaa gtatctttttcacttcttattctgtcactgaaatcaattttttttagcggtaattaataaaccttacctaaagcgtctgacaatgcacagGAGCGGGGTT TTCTTCCTTTGTCAGCAGCGCTTCTCTCAATGCCTGAATTGCATTCTAAAGTTGGAGATATTATGGATGTCTTTACTGATATCGCAATGTTTATTGGGAA CATAATTCTTTCATTTATGTTTTCACGCACAGgtattcttatttaacttccccactagaacagacttgatgattatgtgcattagagttgtaatagagcc tgtatcttctgttttccagGATTGAGCTTTTTGCTACATCATCCTGAACTGACTGCTACAATAATACAATCTCTGAAGGGATCCGTCGATCTGAACAAGG AGGAGTGTGTCCCCCTCCACTATGCTTCAATTTTAATATCCAAGGGTTTTACTTGCAGCTTACTGGAAATTGGAATAAATCTTGAGATGCATTTGAGGGT GgtgggttcactttaccataaagggctcatcctttacatgcgtagatttatacttatatcctactgtttcttacatacttcattcagGTGAGTGCAGTAG ATCGTTTGCTCAAGTCGATACAGCAAACAGAAGAATTTCTATGGATTTTATGGGAGTTGCGTGATGTTTCTAGgtgagaaatgttttgctgtcatatctc ggtttgccaaaatctgcttttgtttgtctttgtcttctttcgaaattaactggaaggcatcctgcaagtgcagGTCTGATTGTGGGCGTGAAGCTTTATT GACGTTAGGTGTTTTTCCAGAGgtatgaatctgcacccagggaaaagaatatacttctgctctttttgttcatcgtggtctttcacagtctatgataaac ttatctgaaaagaattcataattctcattttccccccctgctttacttctgaagctgataaatggtgaaacatctcatggtgaagaaatgacaaacattt gattgtttaaaaaataatgtgtttggtggtgcttttagctaccttcacgaaatttaaacctttggttataatggacactttctgggagattagtggacga aagtgttgcatccgtggccccctgagctggtcatgtaaattttgactataacgaaattgttaatctctttgtttcttgtgcaaactatgttagttctaat tcattattgttaattcacttgtttggagttgtgtaaattgtattggagcaggcatactcgtggttttgactaatatgctttattgttctcttttagGCTT TAGCAGTCTTGATTGAAGCTTTGCATTCAGCTAAGGATATGGAGCCGGCAGTTGAAAATAGTGgtatcgttgctgctttatccctaaatttactaccttg gcatagtctcttggttatcttctttcaaaacctcttacttgcttaacattctcattgtcagGAATTTCACCGCTTAATCTAGCAATATGTCACTCAGCTG CTGAGATTTTTGAGGTCATAGTCTCTGACTCAACTGCATCATGCTTGCATGCTTGGATTGAACATGCCCCAGTCCTTCATAAGGCCTTGCATACTTTGTC ACCGGGTGGTTCTAATCGAAAAGATGCTCCTTCACGATTACTTAAATGGATTGATGCGGGTGTGGTTTATCACAAACATGGCGTAGGTGGCCTTTTACGT TATGCTGCTGTCTTGGCTTCTGGAGGGGACGCCCAATTATCATCATCAAGCATCCTTGCACTCGATTTAACACCGGCTGAGAATGGTGCTGGAGAATCAA CAAATGTCTCTGAGATGAACGTCCTAGATAATCTTGGAAAAGTTATCTTTGAGAAATCTTTTGAAGGTGTTAACCTTTCTGATTCATCAATTTCACAGTT GACAACAGCACTTCGAATTTTAGCGCTGATTTCAGATAATTCAGTATgttatctttccccataatttttccagaaattacttttttttcctttagATGCT ATAGTCTTCTTATTTAAGTGTTCTGAAATGTTGTTCTTTGTACAGACTGTTGCTGCTGCTTTATATGACGAGGGTGCGGTTACAGTTGTGTATGCTATCT TGgtcaactgcagctttatgtttgagaggtcgtcaaatatttatggtaaactactgtctattctgtgatttgattcaactcctctattgctgctaccatt tgaatcttaactttagacgtgatgataagagatacttggaagagtttaaataacccagttgctggataaccgttttttatatttacccttttaataacct ttttcttataggttcacgatgttttcagctacttttcctcaatcgtttgatgattataggtgacactcaactaattcttttgttttggacttagcagatt atctggtggatgacgatcatggatgcagttctatttctgactttttgtctgaacgtaatcgtgagcaaagcttggtggacctgttaattccttcccttgt cctcttgatatcagtcctacaaagactacaggtctggtgctttatacattattagtttcttcatcatgtatcagcaacaaatgaaatgattatataaatt tgattaaaatcttctctcaaaagccatagcttctgaaattctacctttatttactttgttgagactctataattgcgggcttatgcgtcttcattatccc ctctggtcattgacattttctttgctgtctaaagGGAACTAAGGAGCAGTACAGAAACACCAAATTGATGAAGGCACTCCTAAGGCTACATCGGGAAGTC AGgtgagttacttttgttttgttcttagtagtattaatgacatgtatgttaaatgaaaagttaagctttgagccatgatggcttgttttctttccagCCC GAAGCTAGCTGCTTGTGCAGCTGACTTGTCCTCCCATTATCCAGACTCTGCTCTTGGCTTTGGAGCAGTGTGCCACCTCATTGTGTCCGCCCTTGTCTGC TGGCCAGTTTATGGATGGATTCCTGGGCTATTCCACACTCTTCTTTCGGGTGTCCAGACGTCCTCTGTTCCTGCCTTGGGTCCAAAGGAGACCTGTAGCT TCCTCTGCATTCTAgtatggaaatcttacacttccgctaattattttttacttggtgtttgtgatggcatgcactctttatatcattgtgagaaatttaa catatatttccagccgaatagatatgtctcatctgaacatttgtgatggaattttgttcatgtgtattgtagtcagttaatgtaaatggtatcaacggga agatctccatttattgtcttaatactttattcttcatgtatttctcattgcaagAGCGATATTCTCCCCGAAGAAGGAGTCTGGTTTTGGAAGAGTGGCA TGCCCTTATTAAGTGGTCTAAGAAAGTTGGCGGTTGGGACATTGATGGGTCCACAGAAGGAGAAACAGATCAACTGGTATCTGGAGCCTGGTCCACTTGA AAAGCTGATAAACCATTTGACACCTAATCTTGACAAGATTGCAAAGATTATCCAACATCATGCAGTATCTgtatgttcttctatatcttgttaaatccag tgtttctctgccgcttttgcttttgttatcatttattcagcatgatttggactttgtcttatt◄ttcaaaca◄gGCATTGGTGGTCATTCAGGATATGCT TCGG►GTTTTCATTGTTCGTATTGCATGTCAAAGGGTTGAACATGCTTCTATCCTTCTGAGGCCCATATTTTCATCTATCAGAGATGGAATTTTGGATCA GTCATCAACAAGAGACACTGAAGCTTATATGgtatttgttacgcctctctaagtcgctgtctatgttactgctgctcctaaccagtctcattactctctt tcagGTCTACCGATATCTTAATTTTCTGGCTAGTTTATTAGAGCATCCGCATGCTAAGgtcacactctttgcctttacgaacatagttttccttcacttt ttttttttttttttttttttcaccttaaaagtattcacttcagGGATTACTGTTAGAGGAGGGTATTGTTCAACTGCTTGTGGAAGTTCTGGAAAGATGT TATGATGCCACTTATCCAAGTGAAAACAGGGTTCTAGAGTATGGAATTGTGTCCGCGTCTAGTGTGATTCAGTGGTGTATTCCAGCTTTCAGATCGATCT CACTGCTATGCGATTCACAAGTGCCTCTCTTGTGCTTTCAGAAAAAAGAGCTgtaagtgttttttctgcaggagtgctcaacgttaccttatctagatca catttatatctaatcgttttttatttatttatattaacttgtacagATTGGCCAGTCTGAGTGCAAAAGATTGTGCATTGATATTTCCCTTTGTGCTGAA GTTCTGCCAGgtattttgtcgacattgtagtaatctatgtttatcaattgttttccatatgttattatgtttgtgttctttttataaattgctgcactac ggattataaattgtgattgtttatggcaatagattctgagatctcgatgagctcttctaagagatagatagatatctttgtaatatttccttacaaaaaa tatgattacgaagaaattttttattttcttacagGTGTTGCCTGTTGGCAATGAGCTATTATCTTGTCTTGGCGCTTTCAAAGACCTGAGCTCATGTGGT GAAGGTCAAGATGGTCTGGTTTCACTTTTGTTTCATCTGTTTTCTGGTACCGAAGAATCTGTATCTGAAAGGTGGTGTGACACTAATAGTCTCAGTCTCG ATCAACTAGATATGAAGAAAAATCCCCCTTTTCTGTCTTGCTGGATCAAGTTATTGAACTCAATTAATTCAAAAGATGGTTTGTCTAGTCTTGCAATGAA GGCAGTAAACGTTCTGAGCGTGGGCTCCATCAGATTATGCCTTGATGGTAAAAGgtaactcccagactcttcataatctacagttcttgcgctcccagtt taacacgagtttgataggatttttactctgataggcgacgttgtatgtccacttatattcactgtgtatgtggatagaaaaataatgttcgcgatgccac ttagtttaagttggtgtatgcatacagtttagttgatattgttttgttcaggtgatataagcctaaaaattatcaagcagaagatgtgcttagttgcatc tgatgctgttcacgtttaaatacttccaactagtatttcaaaccattcgtctaacatatatatatatttaacacatctgtagtctaaattttcttcattt ttccagTTTGGACTCGAAGAAGGTTGCAGCACTAAAATCTCTTTTTGGCCTTCCAAGTGAGTTTAGTGGTACAGACACTTTTAGAGAGGAAAACATTGGT TTGATTGAACAGATGGTGACACTGTTGAGTTCAATGACTTCGGGGTCTGATAGTTCCGCAACAGCTGAGATGAAACCCTATTTGCATGAGgtacggacta cctcatacctgctttttcttgcatcatcctcttcttttgttgttttcctcttaacactgactttcatattctttttgtggatttgaagGCATCTCAGTCG TTGCTGTCGTTGCTAAAAGACGGGAATATTGATGATATTATCTCCTGCAAAGGTGTTTTTGTTTCTCCTGGGAATCTTGATATGGATGATTTGGTTTCTA GAAACATTGAAGATGATCTCTATCAAAGAGGACTTGAAGACAAGTTCTGGTGGGAATGTCCAGAAACATTACCTGAGCGTCTGCCCCAGTCATCTCTCCC TGCGAAAAGGAAACTACCAACTTTGGAGAGCTCTAGCAGGCGTGCTAAAGGCGAAAACTCTTCTGTTGACATACCTACCCAAAATTCAATTCAACGGGGA ATGGGTTCTGTATCCCTTCCTCCTGCTCCTACACGTAGAGATGCCTTTAGGCAGCGCAAGCCGAATACCAGCAGGCCTCCCTCTATGCATGTAGATGATT ATGTTGCTAGGGAAAGAAGTGTTGATACAGCTGGTAATTCTAATGCAATAACCATTTCACGAGCAGGATCTAGCAGTGGTAGACCTCCATCTATTCATGT TGATGAGTTTATGGCCAGACAGAGAGAACGAGGCCAAAATCCCTCCACCATTGTGGTTGGAGAGGCTGTTGTGCAAGTGAAAAATCCTACTCCTGCTAGA GATACTGAAAAAGTTGCAGGTAAACCTAAACAATTCAAAGCCGATCCTGATGATGATCTACAAGGAATAGATATAGTTTTTGATGGTGAGGAATGTGAAG GACCTGATGACAAGTTGCCCTTTCTTCAGCCCGATGAGAACCTTATGCAGCCTGCTCCTGTCATGGTTGAACAAAACTCTCCTCACTCTATTGTTGAAGA AACTGAGAGTGATGCAAATGGAAGTAGTCAATTCTCTCACATGGGCACACCAGTGGCATCTAATGTTGACGAAAACGCTCAGAGTGAATTTTCATCAAGG ATTTCAGTTTCACGCCCTGAGATGTCGTTGATTCGGGAACCAAGCATTTCTTCAGACAGAAAATTTGTTGAGCAAGCAGACGAAGCAAAGAAAATGGCCC CTCTAAAGAGTGCCGGCATATCTGAATCTGGGTTTATACCTGCTTATCACATGCCAGGATCTTCAGGACAAAATTCAATTGATCCTAGAGTGGGTCCTCA GGGTTTCTATTCAAAGAGTGGTCAGCAACATACGGGCCATATTCATGGTGGATTCAGTGGTCGGGGGGTTTATGAACAGAAAGTGATGCCAAACCAACCT CCTTTACCCTTAGTGCCACCTCCATCAGTCTCACCTGTGATACCACATTCTTCTGATTCTCTTTCTAATCAATCCTCCCCGTTTATTAGTCATGGAACAC AATCTTCAGGAGGACCCACCCGGCTTATGCCACCGCTCCCTTCAGCAATTCCTCAGTACTCATCTAACCCATATGCATCTTTACCACCAAGGACATCTAC AGTTCAATCTTTTGGATACAACCACGCAGGCGTAGGTACCACTGAACAACAACAGAGTGGCCCAACCATTGATCATCAGTCTGGCAATCTATCTGTTACC GGAATGACGTCTTACCCTCCCCCAAATTTAATGCCATCCCATAATTTTAGCAGGCCATCATCTCTCCCTGTGCCATTCTATGGAAATCCTTCGCATCAAG GAGGTGATAAGCCGCAAACTATGTTGTTGGTTCCTTCCATTCCTCAATCACTCAATACACAGTCCATCCCTCAGCTGCCATCGATGCAGCTTTCACAATT ACAACGCCCTATGCAGCCTCCTCAGCACGTTAGACCACCCATACAGATATCTCAACCATCAGAGCAAGGAGTATCAATGCAAAACCCATTTCAGATTCCA ATGCATCAGATGCAGCTGATGCAACAGACGCAAGTCCAGCCTTACTATCACCCTCCTCAACAACAAGAGATCTCCCAGGTGCAGCAACAGCAACAGCATC ATGCTGTTCAAGGTCAGCAAGGAGCTGGGACTTCCCAGCAACAAGAATCTGGAATGTCATTACATGATTACTTCAAGTCCCCTGAAGCCATTCAGgtttg taatccacatccttggtaatgaatgatacgctgatttgttttgtttagtagtattacgtgccacagctgaccataattcttaaaactcctcttcagGCTC TATTAAGTGACCGTGACAAGCTGTGTCAGCTACTGGAACAACATCCAAAGTTAATGCAGATGCTTCAGgttcgatttgtttacttgtttttatgtgcttt ttgaaagcatcatcaacctttgtgtgttaattgtagagttactgaaataggttttgttcttgttggttgtgacagGAAAAACTTGGGCAGCTATGAgaag agagagacttgtcagcaaatacatccctttggcttactagttgcttttcaatttctgtaatgtctaataacatgtacattgtttcagttaatatgtagac aaaagcggtaatcggtatcgctttctgttgttgtttagtcatattcatgtacattagctagaaaagaaactcaaccttcaagttctcaagtcctggtttt tttttgtcaaagcaacaagccacgagcataagcttacatttataaccctgtaagtaacaaaacactaatttaaggaattacagtgattaaaatcattaaa ctt
Border_1 (36492_LB2)
GCCTTTTCAGAAATGGATAAATAGCCTTGCTTCCTATTATATCTTCCCAAATTACCAATACATTACACTAGCATCTGAATTTCATAACCAATCTCGATAC
ACCAAATCGAATTCAATTCGGCGTTAATTCAGTACATTAAAAACGTCCGCAATGTGTTATTAAGTTGTCTAAGCGTCAATTTGTTTACACAATAAGACAA
AGTCCAAATCATGCTGAATAAATGATAACAAAAGCAAAAGCGGCAGAGAAACACTGGATTTAACAAGATATAGAAGAACATACAGATACNTGCATGATGT
TGGATAATCTTTGCAATCTTGTCAAGATTAGGTGTCAAATGGTTTATCAGCTTTTCAAGTGGACCAGGCTCCAGATACCAGTTGATCTGTTTCTCCTTCT
GTGGACCCATCAATGTCCCAACCGCCAACTTTCTTAGACCACTTAATAAGGGCATGCCACTCTTCCAAAACCAGACTCCTTCTTCGGGGAGAATATCGCT
CTTGCAATGAGAAATACATGAAGAATAAAGTATTAAGACAATAAATGGAGATCTTCCCGTTGATACCATTTACATTAACTGACTACAATACACATGAACA
AAATTCCATCACAAATGTTCAGATGAGACATATCTATTCGGCTGGAAATATATGTTAAATTTCTCACAATGATATAAAGAGTGCATGCCATCACAAACAC
CAAGTAAAAAATAATTAGCGGAAGTGTAAGATTTCCATACTAGAATGCAGAGGAAGCTACAGGTCTCCTTTGGACCCAAGGCAGGAACAGAGGACGTCTG
GACACCCGAAAGAAGAGTGTGGAATAGCCCAGGAATCCATCCATAAACTGGCCAGCAGACAAGGGCGGACACAATGAGGTGGCACACTGCTCCAAAGCCA
AGAG
| Start of BLAST Alignment: | NT 6023 / Intron 15 of 23 |
| First 15 bp Perfect Match: | NT 6015 / Intron 15 of 23 |
BLAST Details: Query Sequence: 36492_LB2 Length: (904 letters) Database: Genes from AGI, Total Genome (DNA); Smallest Sum High Probability Sequences producing High-scoring Segment Pairs: Score P(N) N At3g05680 68416.t00573 expressed protein 3567 1.3e-155 1 At3g61260 68416.t06335 DNA-binding family protein / remor... 209 0.46 1 At1g80100 68414.t08555 phosphotransfer family protein sim... 205 0.51 1 At4g21910 68417.t02973 MATE efflux family protein similar... 202 0.80 1 >At3g05680 68416.t00573 expressed protein Length = 10,495 Minus Strand HSPs: Score = 3567 (541.2 bits), Expect = 1.3e-155, P = 1.3e-155 Identities = 719/723 (99%), Positives = 719/723 (99%), Strand = Minus / Plus Query: 904 CTCTTGGCTTTGGAGCAGTGTGCCACCTCATTGTGTCCGCCCTTGTCTGCTGGCCAGTTT 845 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5303 CTCTTGGCTTTGGAGCAGTGTGCCACCTCATTGTGTCCGCCCTTGTCTGCTGGCCAGTTT 5362 Query: 844 ATGGATGGATTCCTGGGCTATTCCACACTCTTCTTTCGGGTGTCCAGACGTCCTCTGTTC 785 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5363 ATGGATGGATTCCTGGGCTATTCCACACTCTTCTTTCGGGTGTCCAGACGTCCTCTGTTC 5422 Query: 784 CTGCCTTGGGTCCAAAGGAGACCTGTAGCTTCCTCTGCATTCTAGTATGGAAATCTTACA 725 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5423 CTGCCTTGGGTCCAAAGGAGACCTGTAGCTTCCTCTGCATTCTAGTATGGAAATCTTACA 5482 Query: 724 CTTCCGCTAATTATTTTTTACTTGGTGTTTGTGATGGCATGCACTCTTTATATCATTGTG 665 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5483 CTTCCGCTAATTATTTTTTACTTGGTGTTTGTGATGGCATGCACTCTTTATATCATTGTG 5542 Query: 664 AGAAATTTAACATATATTTCCAGCCGAATAGATATGTCTCATCTGAACATTTGTGATGGA 605 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5543 AGAAATTTAACATATATTTCCAGCCGAATAGATATGTCTCATCTGAACATTTGTGATGGA 5602 Query: 604 ATTTTGTTCATGTGTATTGTAGTCAGTTAATGTAAATGGTATCAACGGGAAGATCTCCAT 545 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5603 ATTTTGTTCATGTGTATTGTAGTCAGTTAATGTAAATGGTATCAACGGGAAGATCTCCAT 5662 Query: 544 TTATTGTCTTAATACTTTATTCTTCATGTATTTCTCATTGCAAGAGCGATATTCTCCCCG 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5663 TTATTGTCTTAATACTTTATTCTTCATGTATTTCTCATTGCAAGAGCGATATTCTCCCCG 5722 Query: 484 AAGAAGGAGTCTGGTTTTGGAAGAGTGGCATGCCCTTATTAAGTGGTCTAAGAAAGTTGG 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5723 AAGAAGGAGTCTGGTTTTGGAAGAGTGGCATGCCCTTATTAAGTGGTCTAAGAAAGTTGG 5782 Query: 424 CGGTTGGGACATTGATGGGTCCACAGAAGGAGAAACAGATCAACTGGTATCTGGAGCCTG 365 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5783 CGGTTGGGACATTGATGGGTCCACAGAAGGAGAAACAGATCAACTGGTATCTGGAGCCTG 5842 Query: 364 GTCCACTTGAAAAGCTGATAAACCATTTGACACCTAATCTTGACAAGATTGCAAAGATTA 305 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5843 GTCCACTTGAAAAGCTGATAAACCATTTGACACCTAATCTTGACAAGATTGCAAAGATTA 5902 Query: 304 TCCAACATCATGCANGTATCTGTATGTTCTTCTATATCTTGTTAAATCCAGTGTTTCTCT 245 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5903 TCCAACATCATGCA-GTATCTGTATGTTCTTCTATATCTTGTTAAATCCAGTGTTTCTCT 5961 Query: 244 GCCGCTTTTGCTTTTGTTATCATTTATTCAGCATGATTTGGACTTTGTCTTATTGTGTAA 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||| | || Sbjct: 5962 GCCGCTTTTGCTTTTGTTATCATTTATTCAGCATGATTTGGACTTTGTCTTATTTTC-AA 6020 Query: 184 ACA 182 ||| Sbjct: 6021 ACA 6023 >At3g61260 68416.t06335 DNA-binding family protein / remorin family protein similar to DNA-binding protein gi|601843 [Arabidopsis thaliana], remorin [Solanum tuberosum] GI:1881585; contains Pfam profiles PF03763: Remorin C-terminal region, PF03766: Remorin N-terminal region Length = 1538 Minus Strand HSPs: Score = 209 (37.4 bits), Expect = 0.61, P = 0.46 Identities = 165/279 (59%), Positives = 165/279 (59%), Strand = Minus / Plus
Border_2 (36492_LB1)
GCCTTTTCAGAAATGGATAAATAGCCTTGCTTCCTATTATATCTTCCCAAATTACCAATACATTACACTAGCATCTGAATTTCATAACCAATCTCGATAC
ACCAAATCGAATTCAATTCGGCGTTAATTCAGTACATTAAAAACGTCCGCAATGTGTTATTAAGTTGTCTAAGCGTCAATTTGTGCAATGAATTTGTTTT
CATTGTTCGTATTGCATGTCAAAGGGTTGAACATGCTTCTATCCTTCTGAGGCCCATATTTTCATCTATCAGAGATGGAATTTTGGATCAGTCATCAACA
AGAGACACTGAAGCTTATATGGTATTTGTTACGCCTCTCTAAGTCGCTGTCTCTGCTCCTTCCACAGGCTCCAGATACCAGTTGATCTGTTTCTCCTTCT
GCGGACCCATCAATGTCCCAACCGCCAACTTTCTTAGACCACTTAATAAGGGCATGCCACTCTTCCAAAACCAGACTCCTTCTTCGGGGAGAATATCGCT
CTTGCAATGAGAAATACATGAAGAATAAAGTATTAAGACAATAAATGGAGATCTTCCCGTTGATACCATTTACATTAACTGACTACAATACACATGAACA
AAATTCCATCACAAATGTTCAGATGAGACATATCTATTCGGCTGGAAATATATGTTAAATTTCTCACAATGATATAAAGAGTGCATGCCATCACAAACAC
CAAGTAAAAAATAATTAGCGGAAGTGTAAAGATTTCCATACTAGAATGCAGAGGAAGCTACAGGTCTCCTTTGGACCCAAGGCAGGAACAGAGGACGTCT
GGACACCCGAAAGAAGAGTGTGGAATAGCCCAGGAATCCATCCATAAACTGGCCAGCAGACAAGGGCGGACACAATGAGGTGGCACACTGCTCCAAGCCA
AGAGCA
| Start of BLAST Alignment: | NT 6054 / Exon 16 of 24 |
| First 15 bp Perfect Match: | NT 6054 / Exon 16 of 24 |
BLAST Details: Query Sequence: 36492_LB1 Length: (906 letters) Database: Genes from AGI, Total Genome (DNA); Smallest Sum High Probability Sequences producing High-scoring Segment Pairs: Score P(N) N At3g05680 68416.t00573 expressed protein 2676 3.1e-115 1 At4g21910 68417.t02973 MATE efflux family protein similar... 202 0.80 1 At1g80100 68414.t08555 phosphotransfer family protein sim... 184 0.9993 1 At2g10833 68415.t01086 pseudogene, hypothetical protein 183 0.99995 1 >At3g05680 68416.t00573 expressed protein Length = 10,495 Plus Strand HSPs: Score = 811 (127.7 bits), Expect = 8.3e-31, P = 8.3e-31 Identities = 207/248 (83%), Positives = 207/248 (83%), Strand = Plus / Plus Query: 196 GTTTTCATTGTTCGTATTGCATGTCAAAGGGTTGAACATGCTTCTATCCTTCTGAGGCCC 255 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6055 GTTTTCATTGTTCGTATTGCATGTCAAAGGGTTGAACATGCTTCTATCCTTCTGAGGCCC 6114 Query: 256 ATATTTTCATCTATCAGAGATGGAATTTTGGATCAGTCATCAACAAGAGACACTGAAGCT 315 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6115 ATATTTTCATCTATCAGAGATGGAATTTTGGATCAGTCATCAACAAGAGACACTGAAGCT 6174 Query: 316 TATATGGTATTTGTTACGCCTCTCTAAGTCGCTGTCTCTGCTCCTTCCACAGGCT--CCA 373 ||||||||||||||||||||||||||||||||||||| || | || | | || ||| Sbjct: 6175 TATATGGTATTTGTTACGCCTCTCTAAGTCGCTGTCTATGTTACTGCTGCTC-CTAACCA 6233 Query: 374 GATACCAGTTGATCTGTTTCTCCTTCTGCGGACCCATCAATGTCCCAACCGCCAACTTTC 433 | | || || ||| |||| | || | || | ||| | | || | ||| Sbjct: 6234 G-TCTCA-TTACTCTCTTTCAGGT-CTACCGATATCTTAATTTTCTG---GCTAG-TTTA 6286 Query: 434 TTAGACCA 441 ||||| || Sbjct: 6287 TTAGAGCA 6294 Minus Strand HSPs: Score = 2676 (407.6 bits), Expect = 3.1e-115, P = 3.1e-115 Identities = 540/543 (99%), Positives = 540/543 (99%), Strand = Minus / Plus Query: 906 TGCTCTTGGCTT-GGAGCAGTGTGCCACCTCATTGTGTCCGCCCTTGTCTGCTGGCCAGT 848 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5301 TGCTCTTGGCTTTGGAGCAGTGTGCCACCTCATTGTGTCCGCCCTTGTCTGCTGGCCAGT 5360 Query: 847 TTATGGATGGATTCCTGGGCTATTCCACACTCTTCTTTCGGGTGTCCAGACGTCCTCTGT 788 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5361 TTATGGATGGATTCCTGGGCTATTCCACACTCTTCTTTCGGGTGTCCAGACGTCCTCTGT 5420 Query: 787 TCCTGCCTTGGGTCCAAAGGAGACCTGTAGCTTCCTCTGCATTCTAGTATGGAAATCTTT 728 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5421 TCCTGCCTTGGGTCCAAAGGAGACCTGTAGCTTCCTCTGCATTCTAGTATGGAAATCTT- 5479 Query: 727 ACACTTCCGCTAATTATTTTTTACTTGGTGTTTGTGATGGCATGCACTCTTTATATCATT 668 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5480 ACACTTCCGCTAATTATTTTTTACTTGGTGTTTGTGATGGCATGCACTCTTTATATCATT 5539 Query: 667 GTGAGAAATTTAACATATATTTCCAGCCGAATAGATATGTCTCATCTGAACATTTGTGAT 608 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5540 GTGAGAAATTTAACATATATTTCCAGCCGAATAGATATGTCTCATCTGAACATTTGTGAT 5599 Query: 607 GGAATTTTGTTCATGTGTATTGTAGTCAGTTAATGTAAATGGTATCAACGGGAAGATCTC 548 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5600 GGAATTTTGTTCATGTGTATTGTAGTCAGTTAATGTAAATGGTATCAACGGGAAGATCTC 5659 Query: 547 CATTTATTGTCTTAATACTTTATTCTTCATGTATTTCTCATTGCAAGAGCGATATTCTCC 488 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5660 CATTTATTGTCTTAATACTTTATTCTTCATGTATTTCTCATTGCAAGAGCGATATTCTCC 5719 Query: 487 CCGAAGAAGGAGTCTGGTTTTGGAAGAGTGGCATGCCCTTATTAAGTGGTCTAAGAAAGT 428 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5720 CCGAAGAAGGAGTCTGGTTTTGGAAGAGTGGCATGCCCTTATTAAGTGGTCTAAGAAAGT 5779 Query: 427 TGGCGGTTGGGACATTGATGGGTCCGCAGAAGGAGAAACAGATCAACTGGTATCTGGAGC 368 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 5780 TGGCGGTTGGGACATTGATGGGTCCACAGAAGGAGAAACAGATCAACTGGTATCTGGAGC 5839 Query: 367 CTG 365 ||| Sbjct: 5840 CTG 5842 >At4g21910 68417.t02973 MATE efflux family protein similar to ripening regulated protein DDTFR18 [Lycopersicon esculentum] GI:12231296; contains Pfam profile PF01554: Uncharacterized membrane protein family Length = 5717 Minus Strand HSPs: Score = 202 (36.4 bits), Expect = 1.6, P = 0.80 Identities = 152/245 (62%), Positives = 152/245 (62%), Strand = Minus / Plus