At5g41480 SYNGENTA 45288
Genomic Sequence (from TAIR)
tgatattattttactaaccgtatatgattatttgtactttcaaaaaaaaaaaacattaacaatcttgaggggttggtaattagagatattaaattaagtt ttttttcgtgatcctgctcacaaacctaaggttaaagtttcgggctttcgacctactcacaaatctaacgtaaaatttgattagagagcaaaagaagctg accaaatcagaatttgtttatgaccatgtcaaataactacatcgaatcacaagagcaaatcaaatacaaaaaatgtttaccgttttatgtcttttactat ttaaaaccaatttaaaatatcccttcccgtaaaaaaagacctcttcccatttacatttacgttgagcccaaagtctaagcccaagttataaacaaagccc ataaacaaaaaaagaagaagcgaaatgttctttacgtttttcgcctgtaagaacaaaattgcagagaaagaatttgattaccgaggtagtgaagATGAGG ACACTCTGGAATCACTTTAGTACCATTTCCTATATCAAAATTTCTCCGAGAATGAGAAGAATTTCTGCAGCAAATTTGATCTCAAATCGAAATCTTTCAA CCATTTCTTCTACTGAAGATCCCGAGCTCAGAGATTTTGTGGGATTTTTAGAATCTCTCAAAAACTATGAGAAATCAGGTGTACCAAAAGGAGCTGGAAC TGATTCTGATGATGGATTCGATCTGGGTCGAATGAAACGTCTCATGCTTCGCCTCCGTAATCCTCATTACAAATACAAGgttcgtgctttttgctaattt caccatttctcttactgattcctatgttaaaggtctcatctttagatttggattgttttcataataatgaacaattaggatagattctcctatggattga aaagacttgtaatgtttggaagttgtttattgaaaggtctaatctttagatttggattcgtttttgtgttatgcatattttgttttctggtttatgatta gtggaaggtgagattaacaagtagggcagtgattatagGTTGTTCATGTTGCTGGAACTAAGGGAAAAGGATCAACTTCTGCTTTTCTCTCTAATATCTT ACGAGCTGGAGGATATTCTGTTGGTTGTTATTCTAGgtaaagtattgactttggattaaagttttattgtattttgagtttgaatctttcatggttactt acatgagttttttgttcttcattgcagCCCACATATTCTGAGTATCAAAGAACGGATTTCTTGTAATGGAGAACCTGTCTCTGCTTCCACTCTTAATGAT CTTTTCTATTCAGTCAAACCGATTCTTGAACAGTCTATTCAAGAGGAAAATGGTTCTTTGAGTCATTTTGAGgtaactaatcaagcttctcttagattct gcatttcacacagtttccttttgtttcttatacagatatttctttttggcagATTCTCACTGGGATAGCCTTCTCTTTATTTGAAAAGGAAAATGTCGAC ATTGCGGTTATAGAGgtggctcatctttttacattagacctttaaagagacttgcttatgctattgtgttgaagattgccgtctagtgtaattagcttat gtataccactgttttatattttcttgggtatcatcagGCTGGGCTAGGAGGAGCTCGAGACGCTACAAATGTCATTGAAAGTTCAAATCTTGCTGCATCG GTCATAACAACGATAGGTGAGGAACACATGGCAGCACTTGGGGGTTCCTTGGAAAGTATAGCAGAGGCTAAATCTGGAATTATTAAACACGGTCGCCCAg ttaggtggtttttatgtgtttgcttatcttataacctttgaattataagcacattgatagatagagttttacgtgttgttatgaaacttgtagGTGGTTT TAGGTGGACCGTTTCTTCCTCATATCGAGGGCATTCTCCGTTCTAAAGCAGCTTCAGTGTCGTCATCGGTTATTTTGGCATCTAATATTGGATCTAGTTC TTCAATCAAAGGCATCATTAACAAAAATGGGATCGGGCTTTGCCAGTCCTGTGACATCGTGATACAGAATGAGAAAGATGATCAACCAgtaagtttcaaa aaccttttattttttattcaagaaatgggtctgtgattcttaatatatcaacaaattgtacatataaatgcagATTGTTGAGCTTAGTGATGTAAACCTA CGTATGCTTGGACATCACCAGCTCCAAAATGCTGTTACTGCCACATGTGTGTCTCTTTGTCTTCGCGATCAAGgtataatgcacttttgagtctctatat ctagcaacaaaagaattgaacaagcttacaaattttgttacttttattatggaataatcagGATGTGGGAGAGTGACAGATGAAGCAATTAGGATTGGTT TAGAGAACACTCGTTTACTTGGGAGAAGTCAGTTTCTGACACCAAAAGAAGCAGAGACTTTAC◄TATTACCCGGAGCAACAGTGCTTCTTGATGGAGgtt ggt►tatagc►tttaatgttttctacttcggatcttagtcaattgaaagttttgtttcttctctatgagtatcgtaatgttag◄aaccgatcctctttcc ttgaaacttttggtttacggtatcaatctctggtctgtttttcagCTCACACCAAAGAGTCAGCGCGAGCCCTCAAGGAGATGATAAAGAAGGATTTTCC AGAGAAAAGATTGGTATTTGTGGTTGCCATGGCTAGTGACAAAGATCATGTGTCCTTTGCAAAAGAACTTCTCTCAGGTCTAAAACCAGAAGCAGTGATT CTAACAGAAGCTGACATCGGTGGAGGTAAGATTAGATCAACGGAGTCTTCGGTGTTGAAAGAATCATGGATAAAAGCTGCTGATGAATTGGGGTCAAGGT CTATGGAAGCTTCAGAAAACAAAACTGTGTTGGGTTCCTTAAAGCTTGCCTACAAGATACTCAGCGATGACACAACAAGTAGTGACTCAGGAATGGTTAT AGTCACGGGTTCGCTTCACATTGTATCTTCAGTCTTAGCTTCTCTTCAACATTAAtttccttatctttacgagtctcttgtaaaaaaactcagtttgtgt taaaccaaacaaatctttttcctggaacatcatgaaccgtaacatttgatggtagttgaaaccttctgaaagaggcagagactttcaaagaagcaaataa acaaagtaggtgagattattagttgtagtttttgtcccacatcgcttacgtagaatagtaagaggcttgtgagcttactatataaagagaagaggtggtt cagttggaaagtatgatccttcaggcaagttataggggaaatgaggaatggttataatctcgctttaatgcgtgatgagcgctccgctcaaagcctgtta cgactaattgggcgctccaatttttatacaatctgatccctctcttgtccaaacacttttttaaaataacattttcactctaaaaaagtacaaaaaatat ttta
Border_1 (45288_LB)
GCCTTTTCAGAAATGGATAAATAGCCTTGCTTCCTATTATATCTTCCCAAATTACCAATACATTACACTAGCATCTGAATTTCATAACCAATCTCGATAC
ACCAAATCGAATTCAATTCGGCGTTAATTCAGTACATTAAAAACGTCCGCAATGTGTTATTAAGTTGTCTAAGCGTCAATTTGTAAAGTCTCTGCTTCTT
TTGGTGTCAGAAACTGACTTCTCCCAAGTAAACGAGTGTTCTCTAAACCAATCCTAATTGCTTCATCTGTCACTCTCCCACATCCTGATTATTCCATAAT
AAAAGTAACAAAATTTGTAAGCTTGTTCAATTCTTTTGTTGCTAGATATAGAGACTCAAAAGTGCATTATACCTTGATCGCGAAGACAAAGAGACACACA
TGTGGCAGTAACAGCATTTTGGAGCTGGTGATGTCCAAGCATACGTAGGTTTACATCACTAAGCTCAACAATCTGCATTTATATGTACAATTTGTTGATA
TATTAAGAATCACAGACCCATTTCTTGAATAAAAAATAAAAGGTTTTTGAAACTTACTGGTTGATCATCTTTCTCATCCTG
| Start of BLAST Alignment: | NT 2086 / Intron 8 of 8 |
| First 15 bp Perfect Match: | NT 1969 / Exon 8 of 9 |
BLAST Details: Query Sequence: 45288_LB Length: (581 letters) Database: Genes from AGI, Total Genome (DNA); Smallest Sum High Probability Sequences producing High-scoring Segment Pairs: Score P(N) N At5g41480 68418.t04693 dihydrofolate synthetase/folylpoly... 2016 8.8e-87 1 At3g20270 68416.t02292 lipid-binding serum glycoprotein f... 199 0.60 1 At4g33120 68417.t04348 coclaurine N-methyltransferase, pu... 193 0.82 1 At1g16060 68414.t01716 ovule development protein, putativ... 185 0.99 1 >At5g41480 68418.t04693 dihydrofolate synthetase/folylpolyglutamate synthetase (DHFS/FPGS1) nearly identical to GI:17976703; identical to cDNA dihydrofolate synthetase/folylpolyglutamate synthetase (dhfs/fpgs1 gene) GI:17976702 Length = 2710 Minus Strand HSPs: Score = 2016 (308.5 bits), Expect = 8.8e-87, P = 8.8e-87 Identities = 460/519 (88%), Positives = 460/519 (88%), Strand = Minus / Plus Query: 581 CAGGATGAGAAAGATGATCAACCAGTAAGTTTCAAAAACCTTTTATTTTTTATTCAAGAA 522 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1611 CAGAATGAGAAAGATGATCAACCAGTAAGTTTCAAAAACCTTTTATTTTTTATTCAAGAA 1670 Query: 521 ATGGGTCTGTGATTCTTAATATATCAACAAATTGTACATATAAATGCAGATTGTTGAGCT 462 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1671 ATGGGTCTGTGATTCTTAATATATCAACAAATTGTACATATAAATGCAGATTGTTGAGCT 1730 Query: 461 TAGTGATGTAAACCTACGTATGCTTGGACATCACCAGCTCCAAAATGCTGTTACTGCCAC 402 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1731 TAGTGATGTAAACCTACGTATGCTTGGACATCACCAGCTCCAAAATGCTGTTACTGCCAC 1790 Query: 401 ATGTGTGTCTCTTTGTCTTCGCGATCAAGGTATAATGCACTTTTGAGTCTCTATATCTAG 342 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1791 ATGTGTGTCTCTTTGTCTTCGCGATCAAGGTATAATGCACTTTTGAGTCTCTATATCTAG 1850 Query: 341 CAACAAAAGAATTGAACAAGCTTACAAATTTTGTTACTTTTATTATGGAATAATCAGGAT 282 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1851 CAACAAAAGAATTGAACAAGCTTACAAATTTTGTTACTTTTATTATGGAATAATCAGGAT 1910 Query: 281 GTGGGAGAGTGACAGATGAAGCAATTAGGATTGGTTTAGAGAACACTCGTTTACTTGGGA 222 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1911 GTGGGAGAGTGACAGATGAAGCAATTAGGATTGGTTTAGAGAACACTCGTTTACTTGGGA 1970 Query: 221 GAAGTCAGTTTCTGACACCAAAAGAAGCAGAGACTTTACAAATTGACGCTTAGACAACT- 163 ||||||||||||||||||||||||||||||||||||||| | || || | || |||| Sbjct: 1971 GAAGTCAGTTTCTGACACCAAAAGAAGCAGAGACTTTACTA-TT-ACCCGGAG-CAACAG 2027 Query: 162 TAATAACACATTGCGGACGTTTTTAA-TGTACTGAATTA-ACGCCGAATTGAATTCGATT 105 | | || | || | || || | || || || || || || | || ||| Sbjct: 2028 TGCTTCTTGATGGAGGTTGGTTATAGCTTTAATGTTTTCTACTTCGGATCTTAGTCAATT 2087 Query: 104 TGGTGTATCGAGATTGGT-TATGAAATTCAGA-TGCTAG 68 || | | | | ||||| || | || ||| Sbjct: 2088 GAAAGTTTTGTTTCTTCTCTATGAGTATCGTAATGTTAG 2126 >At3g20270 68416.t02292 lipid-binding serum glycoprotein family protein similar to SP|P17213 Bactericidal permeability-increasing protein precursor (BPI) {Homo sapiens}; contains Pfam profile PF02886: LBP / BPI / CETP family, C-terminal domain Length = 3888 Plus Strand HSPs: Score = 199 (35.9 bits), Expect = 0.91, P = 0.60 Identities = 125/212 (58%), Positives = 125/212 (58%), Strand = Plus / Plus
Border_2 (45288_RB)
ATTAGGCACCCCAGGCTTTACACTTTATGCTTCCGGCTCGTATGTTGTGTGGAATTGTGAGCGGATAACAATTTCACACAGGAAACAGCTATGACCATGA
TTACGCCAAGCTCGAAATTAACCCTCACTAAAGGGAACAAAAGCTGGAGCTCGCTTGAGCTTGGATCAGATTGTCGTTTCCCGCCTTCAGTTTATGCATG
CTAGCATATGCCATGGAAACTATCAGTGTTTAATGTTTTCTACTTCGGATCTTAGTCAATTGAAAGTTTTGTTTCTTCTCTATGAGTATCGTAATGTTAG
AACCGATCCTCTTTCCTTGAAACTTTTGGTTTACGGTATCAATCTCTGGTCTGTTTTTCAGCTCACACCAAAGAGTCAGCGCGAGCCCTCAAGGAGATGA
TAAAGAAGGATTTTCCAGAGAAAAGATTGGTATTTGTGGTTGCCATGGCTAGTGACAAAGATCATGTGTCCTTTGCAAAAGAACTTCTCTCAGGTCTAAA
ACCAGAAGCAGTGATTCTAACAGAAGCTGACATCGGTGGAGGTAAGATTAGATCAACGGAGTCTTCGGTGTTGAAAGAATCATGGATAAAAGCTGCTGAT
GAATTGGGGTCAAGGTCTATGGAAGCTTCAGAAAACAAAACTGTGTTGGGTTCCTTAAAGCTTGCCTACAAGATACTCAGCGATGACACAACAAGTAGTG
ACTCAGGAATGGTTATAGTCACGGGTTCGCTTCACATTGTATCTTCAGTCTTAGCTTCTCTTCAACATTAATTTCCTTATCTTTACGAGTCTCTTGTAAA
AAAACTCAGTTTGTGTTAAACCAAACAAATCTTTTTCCTGGAACATCATGAACCGTAACATTTGATGGTAGTTGAAACCTTCTGAAAGAGGCAGAGACTT
TCAAAGAAGCAAATAAACAAAGTAGGTGAGATTATTAGTTGTAGTTTTTGTCCCACATCGCTTACGTAGAATAGTAAGAGGCTTGTGAGCTTACTATATA
AAGAGAAGAGGTGGTTCAGTTGGAAAGTATGATCCTTCAGGCAAGTTATAGGGGAAATGAGGAATGGTTATAATCTCGCTTTAATGCGTGATGAGCGCTC
CGCTCAAAGCCTGTTACGACTAATTGGGCGCTCCAATTTTTATACAATCTGATCCCTCTCTTGTCCAAACACTTTTTTAAAATAACATTTTCACTCTAAA
AAAGTACAAAAAATATTTTAATATATAAATTTTCTTTACAGTTTATAATTATTAAATATTATATTCATAAAATTATCCCAATGGGCTTGGGTTGGGCCTT
ATAAGTTATATTCCAGTTATAATAGTCCAAAAAAAGGATAAATTATCTATTTTGTAAAACAATTTAGTTATGAAATGATAACCATTGAGGAAATTACAAC
GGATATGCACAGAAAAAAGAAAATTAAGTTGGGTAAGAGAGAGAGTGATGTTTTGATATTTTTACCCTTATGAGAGAAAAAGAGATAGAAAACGAAAGAG
AAGGAAAAAAAATAAAAGAAGTTCAACGTTCATGATAACTCATAAGTTAACAGTGATAAACAAATTATTATGATAACTAAATAAACTAATGCATAAATTA
ACATGTTACAAGAATAGGTAATTGCTAATCTATTAGTTACTGAATGTGAACATGATAAAAAATAAAAAAATCGTTATATGTAATAGTTATCTATAATGTT
GCATACAATTTACCAATTTAAAAGACATGTTAAGGTGATAACTAAATTGCTAATGTATAGTTAAAAGTAATAACTAAATTACCAAAATAAATAAATATGT
TATTACATATTATATAATAAATGATTTAACACAAAAAACATGTTTTCGACGTAAGATAAATAGTGCTTTCATTTTGCTACTGTTTTTTAAAGACATGTTT
ATCATACTAATCAAATAATTAACTACCTAAATTTGTTACCGCCAAAACTTATTTTTTGTTGTTCCATATAATGAGTTTATCTTAATATTTTTCTTGTTAA
CGTGTATATGTGACGAAAGATATTTTTGTCATTAATTTGAGTCAGATGAAAAATAACTAAATAGCAAATTTTCATGCATAGATACCTAATTATTTATTCA
TTTGAGCATAGATTTTTAATTCACCCTAACCATTTTTTTAAACAAATTTTTATAGCCCACGTGGTATTGGCCTAGTTTTAAGAAAAATTTACGCATATTT
AATTTTATAGAATTCTTATACTTGGATAGTAATAATTTTGTAGTATTTGGCTATAATTATGTTCTTATAGCTACTAGTTAGGCTTAAGCAAGCTTGAGTT
AAAGTCATGTTCT
| Start of BLAST Alignment: | NT 2008 / Intron 8 of 8 |
| First 15 bp Perfect Match: | NT 2014 / Intron 8 of 8 |
BLAST Details: Query Sequence: 45288_RB Length: (2313 letters) Database: Genes from AGI, Total Genome (DNA); Smallest Sum High Probability Sequences producing High-scoring Segment Pairs: Score P(N) N At5g41480 68418.t04693 dihydrofolate synthetase/folylpoly... 3281 6.3e-144 1 At1g58300 68414.t06073 heme oxygenase, putative similar t... 784 4.4e-27 1 At4g16590 68417.t02367 glucosyltransferase-related low si... 351 7.9e-07 1 At1g77990 68414.t08311 sulfate transporter identical to s... 351 8.2e-07 1 >At5g41480 68418.t04693 dihydrofolate synthetase/folylpolyglutamate synthetase (DHFS/FPGS1) nearly identical to GI:17976703; identical to cDNA dihydrofolate synthetase/folylpolyglutamate synthetase (dhfs/fpgs1 gene) GI:17976702 Length = 2710 Plus Strand HSPs: Score = 3281 (498.3 bits), Expect = 6.3e-144, P = 6.3e-144 Identities = 661/664 (99%), Positives = 661/664 (99%), Strand = Plus / Plus Query: 221 TATCAGTGTTTAATGTTTTCTACTTCGGATCTTAGTCAATTGAAAGTTTTGTTTCTTCTC 280 ||| || |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2049 TAT-AGC-TTTAATGTTTTCTACTTCGGATCTTAGTCAATTGAAAGTTTTGTTTCTTCTC 2106 Query: 281 TATGAGTATCGTAATGTTAGAACCGATCCTCTTTCCTTGAAACTTTTGGTTTACGGTATC 340 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2107 TATGAGTATCGTAATGTTAGAACCGATCCTCTTTCCTTGAAACTTTTGGTTTACGGTATC 2166 Query: 341 AATCTCTGGTCTGTTTTTCAGCTCACACCAAAGAGTCAGCGCGAGCCCTCAAGGAGATGA 400 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2167 AATCTCTGGTCTGTTTTTCAGCTCACACCAAAGAGTCAGCGCGAGCCCTCAAGGAGATGA 2226 Query: 401 TAAAGAAGGATTTTCCAGAGAAAAGATTGGTATTTGTGGTTGCCATGGCTAGTGACAAAG 460 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2227 TAAAGAAGGATTTTCCAGAGAAAAGATTGGTATTTGTGGTTGCCATGGCTAGTGACAAAG 2286 Query: 461 ATCATGTGTCCTTTGCAAAAGAACTTCTCTCAGGTCTAAAACCAGAAGCAGTGATTCTAA 520 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2287 ATCATGTGTCCTTTGCAAAAGAACTTCTCTCAGGTCTAAAACCAGAAGCAGTGATTCTAA 2346 Query: 521 CAGAAGCTGACATCGGTGGAGGTAAGATTAGATCAACGGAGTCTTCGGTGTTGAAAGAAT 580 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2347 CAGAAGCTGACATCGGTGGAGGTAAGATTAGATCAACGGAGTCTTCGGTGTTGAAAGAAT 2406 Query: 581 CATGGATAAAAGCTGCTGATGAATTGGGGTCAAGGTCTATGGAAGCTTCAGAAAACAAAA 640 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2407 CATGGATAAAAGCTGCTGATGAATTGGGGTCAAGGTCTATGGAAGCTTCAGAAAACAAAA 2466 Query: 641 CTGTGTTGGGTTCCTTAAAGCTTGCCTACAAGATACTCAGCGATGACACAACAAGTAGTG 700 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2467 CTGTGTTGGGTTCCTTAAAGCTTGCCTACAAGATACTCAGCGATGACACAACAAGTAGTG 2526 Query: 701 ACTCAGGAATGGTTATAGTCACGGGTTCGCTTCACATTGTATCTTCAGTCTTAGCTTCTC 760 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2527 ACTCAGGAATGGTTATAGTCACGGGTTCGCTTCACATTGTATCTTCAGTCTTAGCTTCTC 2586 Query: 761 TTCAACATTAATTTCCTTATCTTTACGAGTCTCTTGTAAAAAAACTCAGTTTGTGTTAAA 820 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2587 TTCAACATTAATTTCCTTATCTTTACGAGTCTCTTGTAAAAAAACTCAGTTTGTGTTAAA 2646 Query: 821 CCAAACAAATCTTTTTCCTGGAACATCATGAACCGTAACATTTGATGGTAGTTGAAACCT 880 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2647 CCAAACAAATCTTTTTCCTGGAACATCATGAACCGTAACATTTGATGGTAGTTGAAACCT 2706 Query: 881 TCTG 884 |||| Sbjct: 2707 TCTG 2710 >At1g58300 68414.t06073 heme oxygenase, putative similar to heme oxygenase 4 GI:14485565 from [Arabidopsis thaliana] Length = 1985 Minus Strand HSPs: Score = 784 (123.7 bits), Expect = 4.4e-27, P = 4.4e-27 Identities = 280/404 (69%), Positives = 280/404 (69%), Strand = Minus / Plus