At4g09980 SYNGENTA 47164
Genomic Sequence (from TAIR)
ttatttgtcttccgtgaagtttaagattaaatcttcccaaatttgaaagttcgtgatttttttgacaattttccccatttgtttaggtgaattggaataa atgggcttggcccaataacacaatttttagacactaggtaaattggagtaaatgggcttcacccaatccattttgacttctgtgtatgtcgttcgtgttc ctcgcacttcgccgtgttctctctctctctcacaaactcactcatcttctccgacccaacattttccgatcttcttcgctctaatttcatttctaaactc aaatttttcatctgtaatctcgaaacgattttggaattgaaaatccaaactctattgtggatgttttaagtaacgaaactcagttatagaaaatcgaacc cgaattgatcgtggtaatgtcgaaaccctaatttcgtgggtttagggttttgtagcacagttttcgcaaaaaaATGAAGAAGAAACAAGAAGAGAGTTCG TTGGAGAAGCTAAGTACTTGGTATCAAGATGGAGAGCAAGACGGTGGAGATAGAAGTGAGAAGAGAAGAATGAGTCTTAAAGCATCAGACTTTGAGAGTA GTTCTCGAAGTGGTGGAAGTAAAAGCAAAGAAGATAATAAGTCTGTTGTTGATGTTGAGCATCAAGATCGTGATTCCAAGAGAGAAAGAGATGGGAGAGA ACGAACACATGGATCTTCTTCTGATTCGAGTAAGAGGAAGAGATGGGATGAAGCAGGTGGTCTTGTTAATGATGGTGATCATAAAAGTAGTAAGCTTTCT GATTCTAGACATGATAGTGGTGGAGAAAGAGTTAGTGTTAGTAATGAACATGGTGAGAGTAGGAGAGATTTGAAGTCTGATAGGAGTTTGAAGACTAGTA GTAGAGATGAGAAGAGTAAGAGTCGTGGTGTGAAAGATGATGATAGAGGTAGTCCTTTGAAGAAAACTAGTGGTAAGGATGGTTCTGAGGTAGTTAGAGA AGTGGGTCGATCTAATAGGTCGAAAACACCGGATGCGGATTATGAGAAGGAGAAGTATAGTCGAAAAGATGAGAGGTCTAGAGGTAGGGATGATGGGTGG TCTGATAGGGATAGAGATCAAGAAGGTTTGAAGGATAATTGGAAGAGAAGGCATTCTAGTAGTGGTGATAAAGATCAGAAAGATGGGGACTTGCTTTATG ATCGTGGTAGGGAACGGGAATTTCCTAGGCAAGGACGTGAAAGGAGTGAAGGAGAGAGGTCTCATGGTCGTTTGGGTGGGAGGAAAGATGGAAACAGGGG GGAAGCTGTTAAAGCTTTGTCCAGTGGTGGCGTTTCAAATGAGAATTATGATGTGATTGAGATACAAACCAAGCCACATGATTATGTCAGGGGAGAATCA GGACCCAACTTTGCTCGTATGACTGAATCTGGTCAGCAACCTCCTAAAAAACCTAGTAATAATGAGGAAGAGTGGGCTCACAACCAGGAAGGTAGACAGA GAAGTGAAACTTTTGGTTTTGGGTCTTATGGGGAAGATTCGAGAGATGAAGCTGGTGAAGCCAGTTCTGATTACTCAGGGGCTAAAGCAAGAAACCAGAG AGGTTCAACACCTGGTAGAACTAATTTTGTGCAAACCCCTAATCGTGGTTATCAGACTCCACAAGGCACTAGAGGGAACAGACCCTTAAGGGGTGGGAAA GGAAGACCTGCCGGTGGCAGAGAAAACCAACAAGGTGCCATTCCAATGCCTATCATGGGGTCACCATTTGCAAACCTTGGAATGCCACCACCCAGTCCCA TTCATTCTCTTACTCCTGGCATGTCGCCAATTCCGGGCACTTCTGTCACCCCTGTCTTCATGCCTCCATTTGCCCCAACTCTTATATGGCCTGGGGCCCG AGGTGTTGATGGTAATATGCTACCTGTTCCTCCTGTTCTTTCACCTCTTCCTCCCGGACCATCAGGCCCAAGATTTCCTTCAATCGGCACACCACCAAAC CCGAATATGTTCTTTACTCCACCAGGTTCTGATAGAGGAGGGCCTCCTAACTTTCCTGGGTCCAATATTTCTGGACAAATGGGACGTGGAATGCCATCTG ATAAGACTTCAGGGGGATGGGTTCCTCCTCGAGGTGGTGGACCTCCTGGTAAAGCTCCTTCTAGGGGAGAGCAAAATGACTATTCCCAGAACTTTGTGGA TACTGGAATGCGGCCCCAGAATTTCATTCGGGAGCTGGAGCTTACCAATGTGGAAGACTACCCCAAGCTTAGAGAGCTCATACAGAAGAAGGATGAGATT GTATCTAATTCTGCTTCTGCACCAATGTATCTGAAAGGCGACTTGCATGAAGTTGAGTTATCTCCCGAGTTATTTGGAACAAAGTTTGATGTTATTCTTG TTGACCCACCATGGGAGGAATATGTCCATAGAGCTCCTGGTGTTTCTGATAGTATGGAGTATTGGACATTTGAGGACATTATCAATCTCAAGATTGAGgt gactatcctctacactcttcaattactcataggattttagggtacatgcattcgctcgttggtatacttcaattgctctttgcttagcaatagatctaat agcggggtagcatatatcatctgtcatctgagtattatctagatgaagtagtggtactcaacatatagtaatttaacttgtgtgtaggaccttgtgggta aagttacctagatgacgtagtggtactcaacatatagatatagtaacttaacttgtctgtaaatcttgtgggtacggtttcctagatgatgtagctggta cgaaacatatagtattttaacttgtgtgtagaccttgtaggtaaggttgtttgccatcattgttatttataacaaaagtgaattcttccatgtatatgta gGCAATAGCTGACACTCCATCCTTCCTCTTCCTCTGGGTTGGTGATGGTGTTGGGCTTGAGCAAGGGCGCCAATGCCTGAAAAAGgtacaggatccaaac caaatcgcatttcctttattgttttggatttgtttctcttgacagtatgtacttaatctgtatttattttgtttgggtttgacagTGGGGTTTCAGAAGG TGTGAAGACATTTGCTGGGTGAAAACCAACAAAAGTAATGCAGCACCAACATTGCGACATGATTCTCGTACTGTGTTTCAGCG◄TTCCAA◄Ggtccagta tggtctgccattgccttctcttttgttttccgtgttgcatatcttttgcttaatcttttgtattggtttctctttgtatagGAGCACTGCTTGATGGGGA TAAAGGGTACTGTTCGACGTAGCACTGATGGCCATATAATCCATGCTAACATCGACACTGACGTAATTATTGCTGAAGAGCCTCCTTATGGTTAGtaaaa tgtgtgttcctgatagactgataaaatcgagagtgtcttgcttgtcatatcatgttccttctctctgttctgcttccagcatcctgtttcttttaaagtg agcatgctagtacatcagcaatcaattgtgtataaataggatcgttgcttaatgtgattaaggtatcgagtgtttttgtatttggtactagtgttgggag gcaaggttttgggttctcgaaaacaaagacctatgtttcttttggctctcggttatggtacacgtgattagtttgctggattagtcttgggttatccaca ctgtaagctggttcattgagaaatacattagattctgtggttgattttagcattgccatgtctaaaatattagtgaatttgtatcctcctattattgcaa gctggtttgcttaactgcatttctttacgttgcaaaactccaggttcgactcagaagcctgaagatatgtataggataatagagcattttgcacttggtc gccggaggcttgagcttttcggtgaagaccacaatattcgagctggctggcttactgttggaaaaggcctttcgtcctcaaactttgagccacaggtaag atctcatgttcgctctgtagacatctatccacctcctgtttatatgagctttagacctatgcaaggagcttctttgactgtttgatctgttttggatatt gtgtgctttaggcttatgtgaggaacttcgcagacaaggagggtaaagtgtggctaggaggaggaggaagaaatccacctccagacgcaccgcatcttgt tgtgactactcccgatatagaatcgctgcggcccaaatcaccaatgaagaatcagcaacaacaatcgtatccatcgtctctagcttctgcaaattcctca aaccgaagaaccacaggaaactcaccacaagcaaatcctaatgttgttgtcttacatcaagaggcttctggatctaacttctctgttcctaccaccccgc attgggtgccaccaacggcaccagctgccgcagggccacctccaatggacagctttagagtacctgaaggtggcaacaacacaagaccacctgacgacaa gagttttgacatgtacggctttaattgagcctctcccaaaattgcagagtttccagaaccgtttctattgaatggatattttacccctttgctttgagaa actctgctgcgcacggttttggttctctttttgtaattctgttcattttttcacttccgtagagccaatactttatattcatttcattatcaatcaagct tttacctaataatcccaatttgctccatacaatgtgatgtatccaaatcaaatcgcatttaaccaccctttatattcacaattacaaagtcttatatggt aaatgcatgcagtgtcccagtaatcaccaaacaaaaagtccttagagactctggagtagccatgatttgctcaagaactacttgtaggagccttaaggag accagagtCTAAGATTCACCCACCCCACATTCTAATAGAAATCTCTTGTACTCGAGCTCTACTCTGCTATATGCTTCATTCATTTCATCAGTAGCGGTAG CTTCCTGATTCGTTGAAGCGACctgcatgcagttagcttctttaaaaaccgaggaaaaaatctgtaaacgaatacaactcagaacttaagtatgtaactg acTCTGTATTCTGGAGACATCGAATCATGTCCATCAGAAGCAAGCGGCTCGTTCCAATCCATTAATGCGGTTCTCCACCTTTCGGAGCCATGATGATGAC CTTGTGATGTCTTTCTGGAGATTATTGTGTGTAACGTCCCAATTATGCATATGATGCAGAATCCAAGAACAGGAAGCAGAGAAGTTAACAAAACACCTGT GTTCAActaaagagagacattattactagttgaaaaacaaactaagaatatgcaattctaatttgagttgagatctacaaagaatctaatgaaagggttt at
Border_1 (47164_LB)
GCCTTTTCAGAAATGGATAAATAGCCTTGCTTCCTATTATATCTTCCCAAATTACCAATACATTACACTAGCATCTGAATTTCATAACCAATCTCGATAC
ACCAAATCGAATTCAATTCGGCGTTAATTCAGTACATTAAAAACGTCCGCAATGTGTTATTAAGTTGTCTAAGCGTCAATTTGTTATCGCTGAAACACAG
TACGAGAATCATGTCGCAATGTTGGTGCTGCATTACTTTTGTTGGTTTTCACCCAGCAAATGTCTTCACACCTTCTGAAACCCCACTGTCAAACCCAAAC
AAAATAAATACAGATTAAGTACATACTGTCAAGAGAAACAAATCCAAAACAATAAAGGAAATGCGATTTGGTTTGGATCCTGTACCTTTTTCAGGCATTG
GCGCCCTTGCTCAAGCCCAACACCATCACCAACCCAGAGGAAGAGGAAGGATGGAGTGTCAGCTATTGCCTACATATACATGGAAGAATTCACTTTTGTT
ATAAATAACAATGATGGCAAACAACCTTACCTACAAGGTCTACACACAAGTTAAAATACTATATGTTTCGTACCAGCTACATCATCTAGGAAACCGTACC
CACAATATTTACAGACAAGGGTAAGTTACTATATCTATATGTTGAGTACCACTACNTCATNTANGTAACTTTACCCACAAGGTCCTACACACAANTTAAA
NTACTATATGGTGAGTACCACTACTTCATCTANATAATACTCANATGACAGATGATATATGCTACCCCGCTATTAGATCTATTGCTAAGCAAAGAGCACT
| Start of BLAST Alignment: | NT 2716 / Exon 3 of 4 |
| First 15 bp Perfect Match: | NT 2710 / Exon 3 of 4 |
BLAST Details: Query Sequence: 47164_LB Length: (800 letters) Database: Genes from AGI, Total Genome (DNA); Smallest Sum High Probability Sequences producing High-scoring Segment Pairs: Score P(N) N At4g09980 68417.t01556 methyltransferase MT-A70 family pr... 2967 5.8e-130 1 At2g41740 68415.t04733 villin 2 (VLN2) nearly identical t... 210 0.42 1 At1g29960 68414.t03285 signal peptidase I family protein ... 204 0.61 1 At1g55040 68414.t05760 zinc finger (Ran-binding) family p... 201 0.75 1 >At4g09980 68417.t01556 methyltransferase MT-A70 family protein low similarity to SP|P25583 Karyogamy protein KAR4 {Saccharomyces cerevisiae}, (N6-adenosine)-methyltransferase [Mus musculus] GI:10179948; contains Pfam profile PF05063: MT-A70 (S-adenosylmethionine-binding subunit of human mRNA:m6A methyl-transferase (MTase)) Length = 4554 Minus Strand HSPs: Score = 2967 (451.2 bits), Expect = 5.8e-130, P = 5.8e-130 Identities = 605/620 (97%), Positives = 605/620 (97%), Strand = Minus / Plus Query: 800 AGTGCTCTTTGCTTAGCAATAGATCTAATAGCGGGGTAGCATATATCATCTGTCATNTGA 741 | |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 2357 ATTGCTCTTTGCTTAGCAATAGATCTAATAGCGGGGTAGCATATATCATCTGTCATCTGA 2416 Query: 740 GTATTATNTAGATGAAGTAGTGGTACTCACCATATAGTANTTTAANTTGTGTGTAGGACC 681 ||||||| ||||||||||||||||||||| ||||||||| ||||| |||||||||||||| Sbjct: 2417 GTATTATCTAGATGAAGTAGTGGTACTCAACATATAGTAATTTAACTTGTGTGTAGGACC 2476 Query: 680 TTGTGGGTAAAGTTACNTANATGANGTAGTGGTACTCAACATATAGATATAGTAACTTAC 621 |||||||||||||||| || |||| |||||||||||||||||||||||||||||||||| Sbjct: 2477 TTGTGGGTAAAGTTACCTAGATGACGTAGTGGTACTCAACATATAGATATAGTAACTTAA 2536 Query: 620 CCTTGTCTGTAAATATTGTGGGTACGGTTTCCTAGATGATGTAGCTGGTACGAAACATAT 561 | |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2537 C-TTGTCTGTAAATCTTGTGGGTACGGTTTCCTAGATGATGTAGCTGGTACGAAACATAT 2595 Query: 560 AGTATTTTAACTTGTGTGTAGACCTTGTAGGTAAGGTTGTTTGCCATCATTGTTATTTAT 501 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2596 AGTATTTTAACTTGTGTGTAGACCTTGTAGGTAAGGTTGTTTGCCATCATTGTTATTTAT 2655 Query: 500 AACAAAAGTGAATTCTTCCATGTATATGTAGGCAATAGCTGACACTCCATCCTTCCTCTT 441 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2656 AACAAAAGTGAATTCTTCCATGTATATGTAGGCAATAGCTGACACTCCATCCTTCCTCTT 2715 Query: 440 CCTCTGGGTTGGTGATGGTGTTGGGCTTGAGCAAGGGCGCCAATGCCTGAAAAAGGTACA 381 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2716 CCTCTGGGTTGGTGATGGTGTTGGGCTTGAGCAAGGGCGCCAATGCCTGAAAAAGGTACA 2775 Query: 380 GGATCCAAACCAAATCGCATTTCCTTTATTGTTTTGGATTTGTTTCTCTTGACAGTATGT 321 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2776 GGATCCAAACCAAATCGCATTTCCTTTATTGTTTTGGATTTGTTTCTCTTGACAGTATGT 2835 Query: 320 ACTTAATCTGTATTTATTTTGTTTGGGTTTGACAGTGGGGTTTCAGAAGGTGTGAAGACA 261 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2836 ACTTAATCTGTATTTATTTTGTTTGGGTTTGACAGTGGGGTTTCAGAAGGTGTGAAGACA 2895 Query: 260 TTTGCTGGGTGAAAACCAACAAAAGTAATGCAGCACCAACATTGCGACATGATTCTCGTA 201 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2896 TTTGCTGGGTGAAAACCAACAAAAGTAATGCAGCACCAACATTGCGACATGATTCTCGTA 2955 Query: 200 CTGTGTTTCAGCGATAACAA 181 ||||||||||||| | ||| Sbjct: 2956 CTGTGTTTCAGCGTTC-CAA 2974 >At2g41740 68415.t04733 villin 2 (VLN2) nearly identical to villin 2 (VLN2) [Arabidopsis thaliana] GI:3415115 Length = 6875 Minus Strand HSPs: Score = 210 (37.6 bits), Expect = 0.54, P = 0.42 Identities = 220/399 (55%), Positives = 220/399 (55%), Strand = Minus / Plus