At2g26510 SYNGENTA 4788
Genomic Sequence (from TAIR)
aatgaggttgtacacttcaaaattcgtaataacatcactagacggaaaaagagtgataactgataagaaaacaacatataataagggatgataaaggaca acaacacgatgacaaaaataaacttcattattccaattaataatgaagtacatttccaaataaacaattactaaaacttatacctaacggagaattaata ctttattcttgaagtttgaacaaaaataaatatactttatttactcaaatagtagataaataaaaatcctctgttccttccttctcccacaaatcaaaca agtgactttttatatttatcttattaattctgtagtctcgagattcgctttttctcctgcttacttctttttatcatcttctctttgtcggtttgatttg gaaaaactttctgcaaaaaaaagagagattcttaaactttttatctcaagatcctttcaaaaaatctgaaaagagaagatttttaataaaaaaga►ATGG TTGAAACTGGTCACCATCATCAACATCCACCGGCACCGGCTGCAGCCGGTCATCCGCCGGTTCCATCCATGGCGATGGCGCGTAACATGGGAACCACTTG GCCTCCGGCGGAGCAACTTCATCATCTTCAATATTGCATCCACTCTAACCCTTCTTGGCgttagtctctctctttctgcttatactactttctttatttt tgtttcagatgtaaaaaataaaaattataatcttttcagtcaaaagttgtattagttcagttctgtctctctctctctttatctgctttatgttgtgtct taatttgtttaccaaaagattagtttagatctcagtatctgattcgattctttatatttttcctctgtgttgactatattttagcttgtgttggggacta attagctttaaatctaatgataaatgttgtataattgttcttgagacacactaattgattaagattaaaataaactgtttcgttattacttgtttatgta gttggtgaatccaaaatgctataagaattgaatccttagcagttaaaagtgtggggttgggtttatgctaacactggtcatggaaaatgaaatgcaatta gtgttttaccattacaagaaatgccatttttaagggattttgtaacaaaaggattgtattattgtttccttttaagaattgatttgtctcatttccatta acaatgaatcattttacagATGAGACGGTTGTACTGGCTTTCCAGCATTACATCGTTATGCTCGGGACTACTGTTTTGATTGCCAACACACTAGTGTCAC CAATGGGTGGAGATCCTgtatgtgatgtttttggtttttggatccggttgtctaatatttatgttattatatgattctgaaatcgaccgtttggtatttt gaacgataatagGGTGATAAAGCGCGGGTTATCCAGACTATATTGTTTATGTCGGGCATAAACACGTTGCTACAAACGCTTATCGGGACAAGGCTTCCCA CGGTTATGGGAGTATCGTTCGCGTATGTTCTTCCCGTATTGTCTATAATCAGAGATTACAACAATGGTCAATTCGATTCCGAGAAACAGgttaaagctcg ttttatacttgcgcggtacggttgctatatatatatttttttttttacttgacaaatgccattttccttgtagAGATTCCGACATACTATGAGAACGGTA CAAGGATCATTAATCATTTCTTCATTCGTCAACATCATAATCGGATATGGTCAGGCATGGGGGAACTTAATAAGgtaatataaaagatcaatatataaca ttactagtttagaagctgatggaagttttaacatttaatgattatggtttctttaatgcagAATCTTTAGTCCCATCATTGTTGTGCCCGTTGTTTCTGT TGTGAGCCTTGGCCTATTCCTTAGAGGCTTCCCACTGgtaacaatttcaactaaagtattcagctttaacaaattttaactccttcactaagtcattatg tgatctcttcggattttaacagCTTGCAAACTGTGTGGAAATCGGTCTACCAATGCTGATTCTGTTGATCATCACACAGCAAgtcgggctttttattatt ttccgcgctatatatggtggtgattgtttagatatgtaatattaaatcttgctactgttcatcttgcagTATCTTAAACATGCATTCTCAAGGATTTCTA TGATTCTTGAAAGATATGCTTTACTTGTTTGCCTGGCTATCATATGGGCTTTTGCTGCTATCCTTACTGTTTCTGGTGCTTATAATAATGTTTCTACCGC AACAAAACAAAGTTGTCGAACTGATCGTGCCTTTCTTATGTCATCAGCTCCCTGgtaggttgattactatttgacttgattcttcttttcttctaaggtc taaatatctttatactcagtcactcaaactcatctttcagGATTAGAATCCCATATCCATTCCAGTGGGGGACTCCGATATTCAAAGCGAGTCATGTTTT TGGAATGTTTGGTGCTGCAATTGTCGCATCTGCAGAGgttgttattcatcatattagtttctagcttatgttaaatattcttcatgttacatgctacaac ttgttcttatgttatgtatatccttattttctttagTCTACCGGAGTATTTTTCGCTGCATCTAGACTAGCAGGAGCAACAGCGCCTCCAGCACATGTCG TCTCTCGTAGTATCGGTCTACAGgttttatttccagacactaagaaagttttttttaatcttttcgttttctgttctctctgctaatgttccgaataagt ctataagctgttatattttcctttaagGGTATTGGTGTGCTCCTTGAAGGAATATTTGGTTCCATTACTGGCAATACCGCGTCCGTgtaagttctaaata tctcttgctatatgtgctactatcctttcagaatttatacaaagaaactaggtatataattcatcttgatgatatatacagGGAAAATGTCGGTCTCCTT GGCCTCACACGAATAGGGAGTAGACGAGTGGTGCAGGTTTCAACGTTTTTCATGATATTTTTCTCCATATTTGgtttgtctttcaaccctctaatcagtc atcttgactaagtatagaaagtagccgttcatgggttttaaatccgcgtgttttcaatgatcttcagGAAAATTTGGCGCGTTCTTTGCGTCTATTCCGC TTCCAATCTTTGCAGGCGTATACTGTATACTACTTGGAATCGTTGgtgagtagcattttgtatatgaacctacactacctgatttcttgtaaaagccggg gctgcttatgatacttttgttatgtgattggcccagTTGCTGTTGGAATATCGTTTATACAGTTTACCGACACTAATTCGATGAGAAACATGTACGTCAT TGGTGTCTCTCTCTTCTTAAGTCTTTCCATCGCTCAGTACTTTCTTGCCAACACTTCAAGAGCAGGATATGGACCAGTTAGGACAGCAGGAGGATGGgta agcctttcaaagaaccattgtttgaaacaccattttacggtagtatagggagtgatataatatttctactatatagtgtttctttttcttaaatgtgatg tcgcggtgaattgtggtgcagTTCAACGATATACTTAATACGATATTTGCTTCGGCTCCGTTGGTGGCGACCATTCTTGCGACCATACTAGATAACACGT TGGAAGCAAGACATGCAAGTGACGACGCAAGAGGAATCCCGTGGTGGAAGCCCTTCCAGCACAGGAACGGAGACGGCAGGAACGATGAGTTCTATAGTAT GCCCCTTAGAATCAACGAGTTAATGCCGACACGGTTCCTTTGAagactgcccctgaacgtttcttctgtatttggaaatgtaagatatgattatgtgcat accttgtagcttcattggggaaaaattgagtccagtggatacaaatgaacataggcctttgatggaaaaagctatttttttgcaaactatataacttgtg ttactagattactttgcctttcatatcattagcataccttttgaacaagtgctttataccacatatacaaacaatttttgttctttcattgtttcttaga gcagctccaatgcaaggttctctcactatatttgtggagttctctgattttttgataaaaaaaataaatgaaaactaaactaaaagaagagaatcgattc tctgtagagagtttatggaggctgagagagcctcacacgtggcaagctatgattggtagaaatttataacagaacatagaaaaataaaaatggacgctgg a
Border_1 (4788)
ATCGGAGGAATTGGCTCGAGGAATTGCCCTTATGGTTGAAACTGGTCACCATCATCAACATCCACCGGCACCGGCTGCAGCCGGTCATCCGCCGGTTCCA
TCCATGGCGATGGCGCGTAACATGGGAACCACTTGGCCTCCGGCGGAGCAACTTCATCATCTTCAATATTGCATCCACTCTAACCCTTCTTGGCATGAGA
CGGTTGTACTGGCTTTCCAGCATTACATCGTTATGCTCGGGACTACTGTTTTGATTGCCAACACACTAGTGTCACCAATGGGTGGAGATCCTGGTGATAA
AGCGCGGGTTATCCAGACTATATTGTTTATGTCGGGCATAAACACGTTGCTACAAACGCTTATCGGGACAAGGCTTCCCACGGTTATGGGAGTATCGTTC
GCGTATGTTCTTCCCGTATTGTCTATAATCAGAGATTACAACAATGGTCAATTCGATTCCGAGAAACAGAGATTCCGACATACTATGAGAACGGTACAAG
GATCATTAATCATTTCTTCATTCGTCAACATCATAATCGGATATGGTCAGGCATGGGGGAACTTAATAAGAATCTTTAGTCCCATCATTGTTGTGCCCGT
TGTTTCTGTTGTGAGCCTTGGCCTATTCCTTAGAGGCTTCCCACTGCTTGCAAACTGTGTGGAAATCGGTCTACCAATGCTGATTCTGTTGATCATCACA
CAGCAATATCTTAAACATGCATTCTCAAGGATTTCTAT
Start of BLAST Alignment: | NT 0 / Exon 1 of 14 |
First 15 bp Perfect Match: | NT 0 / Exon 1 of 14 |
BLAST Details: Query Sequence: 4788 Contig0002_U Length: (738 letters) Database: Genes from AGI, Total Genome (DNA); Smallest Sum High Probability Sequences producing High-scoring Segment Pairs: Score P(N) N At2g26510 68415.t02974 xanthine/uracil permease family pr... 885 8.3e-110 5 At2g05760 68415.t00564 xanthine/uracil permease family pr... 285 2.5e-09 2 At5g62890 68418.t07285 permease, putative similar to perm... 264 0.0012 1 At1g49960 68414.t05128 xanthine/uracil permease family pr... 261 0.0016 1 >At2g26510 68415.t02974 xanthine/uracil permease family protein contains Pfam profile: PF00860 permease family Length = 3686 Plus Strand HSPs: Score = 885 (138.8 bits), Expect = 8.3e-110, Sum P(5) = 8.3e-110 Identities = 177/177 (100%), Positives = 177/177 (100%), Strand = Plus / Plus Query: 293 GGTGATAAAGCGCGGGTTATCCAGACTATATTGTTTATGTCGGGCATAAACACGTTGCTA 352 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1090 GGTGATAAAGCGCGGGTTATCCAGACTATATTGTTTATGTCGGGCATAAACACGTTGCTA 1149 Query: 353 CAAACGCTTATCGGGACAAGGCTTCCCACGGTTATGGGAGTATCGTTCGCGTATGTTCTT 412 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1150 CAAACGCTTATCGGGACAAGGCTTCCCACGGTTATGGGAGTATCGTTCGCGTATGTTCTT 1209 Query: 413 CCCGTATTGTCTATAATCAGAGATTACAACAATGGTCAATTCGATTCCGAGAAACAG 469 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1210 CCCGTATTGTCTATAATCAGAGATTACAACAATGGTCAATTCGATTCCGAGAAACAG 1266 Score = 823 (129.5 bits), Expect = 8.3e-110, Sum P(5) = 8.3e-110 Identities = 167/170 (98%), Positives = 167/170 (98%), Strand = Plus / Plus Query: 32 ATGGTTGAAACTGGTCACCATCATCAACATCCACCGGCACCGGCTGCAGCCGGTCATCCG 91 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 174 ATGGTTGAAACTGGTCACCATCATCAACATCCACCGGCACCGGCTGCAGCCGGTCATCCG 233 Query: 92 CCGGTTCCATCCATGGCGATGGCGCGTAACATGGGAACCACTTGGCCTCCGGCGGAGCAA 151 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 234 CCGGTTCCATCCATGGCGATGGCGCGTAACATGGGAACCACTTGGCCTCCGGCGGAGCAA 293 Query: 152 CTTCATCATCTTCAATATTGCATCCACTCTAACCCTTCTTGGCATGAGAC 201 ||||||||||||||||||||||||||||||||||||||||||| | || | Sbjct: 294 CTTCATCATCTTCAATATTGCATCCACTCTAACCCTTCTTGGCGTTAGTC 343 Score = 527 (85.1 bits), Expect = 4.7e-73, Sum P(4) = 4.7e-73 Identities = 253/394 (64%), Positives = 253/394 (64%), Strand = Plus / Plus Query: 169 TTGCATCCACTCT-AACCCTTCTTGGCATGAGACGGTTGTACTGGCTTTCCAGCATTACA 227 || ||| || | || | || | ||||||||||||||||||||||||||||||||| Sbjct: 870 TTCCATTAACAATGAATCATTTTACAGATGAGACGGTTGTACTGGCTTTCCAGCATTACA 929 Query: 228 TCGTTATGCTCGGGACTACTGTTTTGATTGCCAACACACTAGTGTCACCAATGGGTGGAG 287 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 930 TCGTTATGCTCGGGACTACTGTTTTGATTGCCAACACACTAGTGTCACCAATGGGTGGAG 989 Query: 288 ATCCTGG-TGATAAAGCGCG-GGTTATCCAGACTATATTGT-T--TATGTCGGGCATAAA 342 |||||| || | | | |||| | || |||| | ||| | | || | Sbjct: 990 ATCCTGTATG-TGATGTTTTTGGTTTTTG-GATCCGGTTGTCTAATATTTATGTTATTAT 1047 Query: 343 CACGTTGCTACAAACGCTTATCGGGACAAGGCTTCCCACGGTTAT-GGGAG-TATCGTTC 400 | | | || || || | || | || ||| | || ||| | || | | Sbjct: 1048 -ATGATTCTGAAATCGACCGTTTGGT--ATT-TTGA-ACGATAATAGGGTGATAAAGCGC 1102 Query: 401 GCGTATGTTCTTCCCGTATTGTCTATAATCAGAGATTACAACAATGGT-CAATTCGATTC 459 | || | | | | |||||| ||| || | || | || || | ||| || || Sbjct: 1103 GGGT-TATCCAGACTATATTGTTTATG-TCGGGCATAAACACGTTGCTACAAA-CGCTTA 1159 Query: 460 -CGAGAAACAGAGATTCCGACA-TACTATGAGAACGGTACAAGGATCAT-TAATCATTTC 516 || || | || | |||| || | | ||| | || | | || | | | | | Sbjct: 1160 TCGGGACA-AG-GCTTCCCACGGTTATGGGAGTATCGTTCGCGTATGTTCTTCCCGTATT 1217 Query: 517 TTCATTCGTCA-ACATCATAATCGGATATGGTCA 549 || | ||| | || | || | | ||||||| Sbjct: 1218 GTCTATAATCAGAGATTACAA-C--A-ATGGTCA 1247 Score = 515 (83.3 bits), Expect = 8.3e-110, Sum P(5) = 8.3e-110 Identities = 103/103 (100%), Positives = 103/103 (100%), Strand = Plus / Plus Query: 468 AGAGATTCCGACATACTATGAGAACGGTACAAGGATCATTAATCATTTCTTCATTCGTCA 527 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1349 AGAGATTCCGACATACTATGAGAACGGTACAAGGATCATTAATCATTTCTTCATTCGTCA 1408 Query: 528 ACATCATAATCGGATATGGTCAGGCATGGGGGAACTTAATAAG 570 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1409 ACATCATAATCGGATATGGTCAGGCATGGGGGAACTTAATAAG 1451 Score = 409 (67.4 bits), Expect = 8.3e-110, Sum P(5) = 8.3e-110 Identities = 87/92 (94%), Positives = 87/92 (94%), Strand = Plus / Plus Query: 563 TTAATA-AGAATCTTTAGTCCCATCATTGTTGTGCCCGTTGTTTCTGTTGTGAGCCTTGG 621 ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1530 TTAATGCAGAATCTTTAGTCCCATCATTGTTGTGCCCGTTGTTTCTGTTGTGAGCCTTGG 1589 Query: 622 CCTATTCCTTAGAGGCTTCCCACTGCTTGCAA 653 ||||||||||||||||||||||||| | ||| Sbjct: 1590 CCTATTCCTTAGAGGCTTCCCACTGGTAACAA 1621 Score = 315 (53.3 bits), Expect = 7.2e-100, Sum P(4) = 7.2e-100 Identities = 67/72 (93%), Positives = 67/72 (93%), Strand = Plus / Plus Query: 635 GGCTTCCCACTGCTTGCAAACTGTGTGGAAATCGGTCTACCAATGCTGATTCTGTTGATC 694 || || || ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1688 GGATTTTAACAGCTTGCAAACTGTGTGGAAATCGGTCTACCAATGCTGATTCTGTTGATC 1747 Query: 695 ATCACACAGCAA 706 |||||||||||| Sbjct: 1748 ATCACACAGCAA 1759 Score = 179 (32.9 bits), Expect = 8.3e-110, Sum P(5) = 8.3e-110 Identities = 49/64 (76%), Positives = 49/64 (76%), Strand = Plus / Plus Query: 676 AATGCTGATTCT-GTTGATCATCACACAGCAATATCTTAAACATGCATTCTCAAGGATTT 734 ||| | | ||| | | | ||| ||| |||||||||||||||||||||||||||| Sbjct: 1815 AATATTAAATCTTGCTACTGTTCATCTTGCAGTATCTTAAACATGCATTCTCAAGGATTT 1874 Query: 735 CTAT 738 |||| Sbjct: 1875 CTAT 1878 >At2g05760 68415.t00564 xanthine/uracil permease family protein contains Pfam profile: PF00860 permease family Length = 2986 Plus Strand HSPs: Score = 285 (48.8 bits), Expect = 2.5e-09, Sum P(2) = 2.5e-09 Identities = 99/147 (67%), Positives = 99/147 (67%), Strand = Plus / Plus