At4g30580 SYNGENTA 49488
Genomic Sequence (from TAIR)
taaaagttggtatatattgatgaaattagttcaatgtagaagaaaacagtggtgaatggattttgcgatgaaaggaaaaaatggatttagtgattaattt aattcaacgtataaaaatgcttaagtttgataatgggtcactaaaagaccattagttcaaatgggccattgttcaacgacttcaaaggccttgtacaata gtttgctggcttcacttacaaaaacggcatgcaatctacgtcacaaactagaaaatgcaatccgccgctttttcaaagtaaaacgacacacagttgatgt ttagaaagtgaaaacagtagagcagggaacccctgagagataagcctgaagatgacacaaattacatgagcaaatcccacgcatgtttttgctccagatt ccgccATGGATGTCGCTTCTGCTCGGAGCATCTCTTCACATCCTTCATgtaattgcaagtttcggattgtagcttattttgtcaataaagtaacttcaat atcttcgggataactttttcttaattatgttcgcagATTATGGAAAACCGATTTGTTCATCACAATCATCGTTGATTCGGgtaaattttcgttttatttg gatttttttactctttattgattgattcgcctttcgtttctgagaaaatgatggaacgtaatctgcaatggaagcttaattagaatttttacttggtgat gttaagtgaagtatcaagcttttagttattttcattaaacatattctggctctgttgagattttgatgtggatttggatagttggacatagttgaacaat gaacatgaagctctcttctaattgttcttattctatgaaatcattggagatgcagATTTCGAGGGATAAAGTTTGTTGCTTTGGTCGCATTTCTAATGGC ATGACGAGCTTTACTACTTCCCTTCATGgtaaggcaatcaaactatagttttaattgtcccttgatgcggttttgttgctggtcggggcgttacaatatc atttcaatcattccttgctatatataaagacttgtaattttatataggatctactcattttgtttttgagatctgatcgagttacttatccatatatcta tttcgacgtgagatactgagatgaatcttttaaatccttacttgcttcgctttccatgtttcttctttagCTGTCCCGAGTGAAAAATTTATGGGCGAAA CAAGACGTACTGGCATTCAATGGTCTAACCGCTCTTTAAGACATGATCCTTACAGATTTCTTGATAAGAAATCACCTAGATCAAGTCAATTGGCAAGAGA TATCACT►GTGAGAGCAGATCTTTCAGGAGCTGCAACCCCTGACTCTTCTTTTCCTGAACCAGgttttttttggctaaacctttgtgaacaaatttcatc tgttttggtagattacaa◄cctacatcgtt◄ctttttgtttgttagtttctgtctctatacacaatcctttcttgttctttcaactttgaagtgcagAGA TTAAGTTGAGCTCAAGACTCAGAGGGATATTCTTTTGTGTTGTTGCTGGCATTTCGGCTACTTTTCTCATTGTCCTGATGATTATTGGGCATCCGTTCGT CCTTCTCTTCGATCCCTATAGGAGAAAATTCCACCACTTCATTGCTAAACTTTGGGCTTCCATAAGCATTTATCCGTTTTACAAAATCAACATCGAGGGT TTGGAGAATCTGCCATCATCAGACACTCCTGCTGTATATGTTTCAAACCACCAAAGTTTTCTGGATATCTACACACTTCTTAGTCTTGGAAAAAGCTTTA AGTTCATCAGCAAGACAGGGATATTCGTAATTCCCATCATCGGTTGGGCCATGTCCATGATGGGTGTCGTTCCCTTGAAGCGGATGGACCCAAGAAGCCA AGTGgtatgttactctttgtttctcccacatttttcaagtgttttgcttttaaacaatcttcaaagtgttttaactcttgtgcaaattatagGATTGCTT AAAACGCTGCATGGAACTTTTAAAGAAGGGAGCATCTGTGTTTTTCTTCCCAGAAGGAACACGGAGTAAGGATGGTCGGTTAGGTTCTTTCAAGgtaaac acagtctcaagattcttcttgatcatgttttggtatgtgtgttaacataagaggctggcttgtgatattacagAAAGGCGCATTTACAGTGGCTGCGAAG ACCGGAGTTGCAGTAGTTCCAATAACGCTAATGGGAACAGGCAAAATCATGCCAACGGGTAGTGAAGGTATACTGAACCATGGGAATGTGAGAGTTATCA TCCATAAACCAATACATGGAAGCAAAGCGGATGTTCTTTGCAACGAGGCCAGAAGCAAGATTGCAGAATCAATGGATCTCTAAgctgatctcagaagttg tcttttgctgcgtctctgatgaacattgagaagctttaatttttacatgtggaagaattaaatgttgagatcttttttagtcaaaaattgtgatgctccc tttaatgacatttaaaagaaactatcagtttttggtttattataaaattttgtatatttcgttgtatctcgcgaattatcgtacgtatcacagtcttggc cgcattgtcacgcctcccaggaaacagagtccttcccagtccgtacgtgatttccgacttgtaatcccagaagacgtctccttccaaattccaaatctca tgtgagttttattgtatctcttttgttgaactgtgtaatttcggtctgttgaatgtatcgagttgaatcagagattcctgtgttctcagtgaaactgaag caa
Border_1 (49488_AbB)
GTGAGAGCAGATCTTTCAGGAGCTGCAACCCCTGACTCTTCTTTTCCTGAACCAGGTTTTTTTTGGCTAAACCTTTGTGAACAAATTTCATCTGTTTTGG
TAGATTACAACCTACATCGTTCTTTTTGTTTGTTAGTTTCTGTCTCTATACACAATCCTTTCTTGTTCTTTCAACTTTGAAGTGCAGAGATTAAGTTGAG
CTCAAGACTCAGAGGGATATTCTTTTGTGTTGTTGCTGGCATTTCGGCTACTTTTCTCATTGTCCTGATGATTATTGGGCATCCGTTCGTCCTTCTCTTC
GATCCCTATAGGAGAAAATTCCACCACTTCATTGCTAAACTTTGGGCTTCCATAAGCATTTATCCGTTTTACAAAATCAACATCGAGGGTTTGGAGAATC
TGCCATCATCAGACACTCCTGCTGTATATGTTTCAAACCACCAAAGTTTTCTGGATATCTACACACTTCTTAGTCTTGGAAAAAGCTTTAAGTTCATCAG
CAAGACAGGGATATTCGTAATTCCCATCATCGGTTGGGCCATGTCCATGATGGGTGTCGTTCCCTTGAAGCGGATGGACCCAAGAAGCCAAGTGGTATGT
TACTCTTTGTTTCTCCCACATTTTTCAAGTGTTTTGCTTTTAAACAATCTTCAAAGTGTTTTAACTCTTGTGCAAATTATAGGATTGCTTAAAACGCTGC
ATGGAACTTTTAAAGAAGGGAGCATCTGTGTTTTTCTTCCCAGAAGGAACACGGAGTAAGGATGGTCGGTTAGGTTCTTTCAAGGTAAACACAGTCTCAA
GATTCTTCTTGATCATGTTTTGGTATGTGTGTTAACATAAGAGGCTGGCTTGTGATATTACAGAAAGGCGCATTTACAGTGGCTGCGAAGACCGGAGTTG
CAGTAGTTCCAATAACGCTAATGGGAACAGGCAAAATCATGCCAACGGGTAGTGAAGGTATACTGAACCATGGGAATGTGAGAGTTATCATCCATAAACC
AATACATGGAAGCAAAGCGGATGTTCTTTGCAACGAGGCCAGAAGCAAGATTGCAGAATCAATGGATCTCTAAGCTGATCTCAGAAGTTGTCTTTTGCTG
CGTCTCTGATGAACATTGAGAAGCTTTAATTTTTACATGTGGAAGAATTAAATGTTGAGATCTTTTTTAGTCAAAAATTGTGATGCTCCCTTTAATGACA
TTTAAAAGAAACTATCAGTTTTTGGTTTATTATAAAATTTTGTATATTTCGTTGTATCTCGCGAATTATCGTACGTATCACAGTCTTGGCCGCATTGTCA
CGCCTCCCAGGAAACAGAGTCCTTCCCAGTCCGTACGTGATTTCCGACTTGTAATCCCAGAAGACGTCTCCTTCCAAATTCCAAATCTCATGTGAGTTTT
ATTGTATCTCTTTTGTTGAACTGTGTAATTTCGGTCTGTTGAATGTATCGAGTTGAATCAGAGATTCCTGTGTTCTCAGTGAAACTGAAGCAATATATAC
TGAAATAGTTGTGCTTATAATTCTTGTTGATTCTCCCATAGATGACAGTAGATCATCTGGTTATATTTATGCAGAATTGAAGGCTCTTATTCTAGTTGGA
GGATTCGGAACCAGATTGAGGCCACTTACCTTGAGCATGCCTAAACCACTTGTTGATTTTGGAAACAAACCCATGATTTTGCATCAGGTAGGTTAGCTTC
TTCTTCTTCTTTTGTATTTGCTCAAGTTTTCACAGTTTCTTTTGTTCTCATTATGATGCATTCGCAGATTGAAGCTCTAAAAGGTGCTGGAGTGACTGAA
GTTGTATTAGCTATCAATCACCAACAACCAGAGGTACATACATTCATTGTCCTTAATAACGATACGATAACAATTGAAATTCTTCCGTGTCATCCTCCTT
CTCCTTGTGTGTTTGGTATTACTCAGGTCATGTTGAACTTTGTGAAAGAATATGAGAAGAAGCTAGAGATTAAGATTACATTTTCCCAAGAAACTGAACC
GCTTGGAACAGCAGGGCCTCTCGCGCTGGCTCGGGATAAGCTGGTCGATGAATCAGGCCAACCCTTTTTTGTACTAAACAGCGATGTTATCTGTGAATAC
CCATTGCTTGAGATGATCGAGTTTCACAAGACTAACCGTGCTGAAGCATCAATCATGGTGACCGAGGTAGTCAAACAGGAGCATTTTCTGCATTTTGTGA
AGTTTATCTTTCATCTGTTAATAGCATTTTCTGATATTAACAGGTTGATGATCCTTCTAAGTATGGTGTGGTGGTTACAGAGGAAGGTACAGCGAGAGTT
GAAAGTTTTGTCGAGAAACCGAAACATTTTGTGGGGAACAAGATCAACGCTGGGATATACCTCTTGAGCCCATCTGTTCTTGACAGGATTGAGCTGAGAA
GGACTTCGATAGAGAAAGAGATATTCCCTAAGATAGCTTCAGAGAAGAAGCTTTACGCGATGGTACTACCTGGTTTTTGGATGGACATTGGTCAACCGAA
AGATTACATAACCGGGCAAAGAATGTACCTTAACTCTCTAAGAGAGAAAACTCCGCAAGAACTGGCCACAGGGGATAACATAATCGGGAATGTTCTCGTG
CACGAAAGTGCGGTTATAGGAGAAGGTTGCTTGATAGGACCTGATGTGGTGATTGGTCCGGGATGTGTGATTGATTCAGGTGTAAGATTGTTTGGTTGTA
CTGTAATGCGCGGTGTGTGGATCAAGGAACATGCGTGTATCTCTAATAGTATCGTGGGATGGGATTCAACCGTTGGAAGGTGGGCTCGAGTTTTTAATAT
AACGGTTCTTGGCAAAGATGTTAACGTCGCCGATGCAGAGGTTTACAACAGTGGGGTTGTTATCGAAGAGCAAGGTCTGTGAAACCAGAGCCTAGACCTA
GATTAGTTAGTTCCACTGTTTCCAGAGTCTTATGAACCGCAATATTCTTACAATTTAAAACAGATACAAACTCTATGGTAAACCATATCATAAACCGGTT
AAAAATGGTATTCGACACCAATAGAGAAAAACGTTTTTCAGATCCATCCCTAAGCAAGTTGTGTATATTTCTTTCGTAAATGTTTTGAGACATTCTTATA
AGGGACATATAAATTATTGTAGATAAAGCCTATGTTTCTTAAACACGAAACTGTGATTTATTAATAGACTATAGTTTGGTGTATGTAATTAACGTTGAGA
AAAATGAAAGACGTGACGGCAGAGAGAGAGAGAGTGGACCCGACCCGGACGGCACGGAGACACTTTCAGTTTCTTCTTCTTCTCTTCTGTCTTTGTGATA
TTTCTCTCAAAATCAATATTTTTTCATCTGTGAAACGACTTCGTCTCCTCCCACTCCATTGTCACTTTCTTCTTCACCCTTCTCTCGTCTCCGTCTGATT
TGGCGTGTAACTTCTTTCTACCGTAATTCTCCTTCGTCTTCTTCTCTGGTATATCTCTTGCATTCCCTCCTAATTTCTTAGCCAATTACTGTTTGGAATG
ATCTTCATTTTGTACTTCCCATTGCTTGATTTTGGTTGACACCTTTCTCGTTTAAGATCGTCTCGTTTTCATGCTGAAAACTCAAGTATTTAGTTTTTTC
GTTTGTACCCTTTTGTTGATGTTTTGGTTTGGGGAGAAAATGTGGTTCCTTTCAAGTTTTTTCCGTCAATTTGAGTTCTCAGGTCAACGAAAATGGATGG
ATGTTCTTAACCCATTAACCAAGTTTGATTTTTAGAGAGATTCTGTAAACAAACAATAACATTTTTTGTGCTTGAATTATTTTTATATTTATTGCAAGTT
TAGGATTTTGCTGCTTGAAATGATTTTGATCATAAATGTTTATTACATTTTCTTATGTGTGTAAAAACAGGTTTGGGATTCATGAGTTGAGTCACAAGGA
AAAAGCATGTTAGACTGTGGCAAAAAAGCAGTCAAATCACAAGTAATCAGTGGCCGTCTCGAGAAGTTTGTAAGGTAACTCTCATTATTGTATATAGTTG
ATCGAAATTTAACATGATGATATCATTCTAGCAGATTCAGATATTGTTTAGCCAAAAAGGACATTCCTTTACTTCAGGTTTGAAACTAAATGGATATCTT
TAGTTTATTTTGTTCTTCACAGGTTGGATAGTATGGATTCTAGGTACTCGCAGACTTCTGATACTGGTCTAAACAGATGCACTCTCAATTTACAAGGACC
AACACGTGGTGGTGGTGCTCAGGGAAACAATGTATCTTCTGGTTCCTTTAAGAAAGGGTTTAGAAAAGGTTCTAAAGGTCTTTGGTCTATAGGAAGATCA
ATTGGTTTAGGGGTTTCACGAGCAGTTTTTCCTGAAGATCT
| Start of BLAST Alignment: | NT 902 / Exon 4 of 7 |
| First 15 bp Perfect Match: | NT 902 / Exon 4 of 7 |
BLAST Details: Query Sequence: 49488_AbB Border # Length: (4341 letters) Database: Genes from AGI, Total Genome (DNA); Smallest Sum High Probability Sequences producing High-scoring Segment Pairs: Score P(N) N At4g30570 68417.t04024 GDP-mannose pyrophosphorylase, put... 6375 2.5e-283 1 At4g30580 68417.t04025 phospholipid/glycerol acyltransfer... 6179 1.0e-274 1 At3g55590 68416.t05716 GDP-mannose pyrophosphorylase, put... 2050 1.7e-99 2 At4g30560 68417.t04023 cyclic nucleotide-regulated ion ch... 2175 4.8e-93 1 >At4g30580 68417.t04025 phospholipid/glycerol acyltransferase family protein Length = 2179 Plus Strand HSPs: Score = 6179 (933.1 bits), Expect = 1.0e-274, P = 1.0e-274 Identities = 1239/1247 (99%), Positives = 1239/1247 (99%), Strand = Plus / Plus Query: 1 GTGAGAGCAGATCTTTCAGGAGCTGCAACCCCTGACTCTTCTTTTCCTGAACCAGGNNNN 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 933 GTGAGAGCAGATCTTTCAGGAGCTGCAACCCCTGACTCTTCTTTTCCTGAACCAGGTTTT 992 Query: 61 NNNNGGCTAAACCTTTGTGAACAAATTTCATCTGTTTTGGTAGATTACAACCTACATCGT 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 993 TTTTGGCTAAACCTTTGTGAACAAATTTCATCTGTTTTGGTAGATTACAACCTACATCGT 1052 Query: 121 TCTTTTTGTTTGTTAGTTTCTGTCTCTATACACAATCCTTTCTTGTTCTTTCAACTTTGA 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1053 TCTTTTTGTTTGTTAGTTTCTGTCTCTATACACAATCCTTTCTTGTTCTTTCAACTTTGA 1112 Query: 181 AGTGCAGAGATTAAGTTGAGCTCAAGACTCAGAGGGATATTCTTTTGTGTTGTTGCTGGC 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1113 AGTGCAGAGATTAAGTTGAGCTCAAGACTCAGAGGGATATTCTTTTGTGTTGTTGCTGGC 1172 Query: 241 ATTTCGGCTACTTTTCTCATTGTCCTGATGATTATTGGGCATCCGTTCGTCCTTCTCTTC 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1173 ATTTCGGCTACTTTTCTCATTGTCCTGATGATTATTGGGCATCCGTTCGTCCTTCTCTTC 1232 Query: 301 GATCCCTATAGGAGAAAATTCCACCACTTCATTGCTAAACTTTGGGCTTCCATAAGCATT 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1233 GATCCCTATAGGAGAAAATTCCACCACTTCATTGCTAAACTTTGGGCTTCCATAAGCATT 1292 Query: 361 TATCCGTTTTACAAAATCAACATCGAGGGTTTGGAGAATCTGCCATCATCAGACACTCCT 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1293 TATCCGTTTTACAAAATCAACATCGAGGGTTTGGAGAATCTGCCATCATCAGACACTCCT 1352 Query: 421 GCTGTATATGTTTCAAACCACCAAAGTTTTCTGGATATCTACACACTTCTTAGTCTTGGA 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1353 GCTGTATATGTTTCAAACCACCAAAGTTTTCTGGATATCTACACACTTCTTAGTCTTGGA 1412 Query: 481 AAAAGCTTTAAGTTCATCAGCAAGACAGGGATATTCGTAATTCCCATCATCGGTTGGGCC 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1413 AAAAGCTTTAAGTTCATCAGCAAGACAGGGATATTCGTAATTCCCATCATCGGTTGGGCC 1472 Query: 541 ATGTCCATGATGGGTGTCGTTCCCTTGAAGCGGATGGACCCAAGAAGCCAAGTGGTATGT 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1473 ATGTCCATGATGGGTGTCGTTCCCTTGAAGCGGATGGACCCAAGAAGCCAAGTGGTATGT 1532 Query: 601 TACTCTTTGTTTCTCCCACATTTTTCAAGTGTTTTGCTTTTAAACAATCTTCAAAGTGTT 660 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1533 TACTCTTTGTTTCTCCCACATTTTTCAAGTGTTTTGCTTTTAAACAATCTTCAAAGTGTT 1592 Query: 661 TTAACTCTTGTGCAAATTATAGGATTGCTTAAAACGCTGCATGGAACTTTTAAAGAAGGG 720 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1593 TTAACTCTTGTGCAAATTATAGGATTGCTTAAAACGCTGCATGGAACTTTTAAAGAAGGG 1652 Query: 721 AGCATCTGTGTTTTTCTTCCCAGAAGGAACACGGAGTAAGGATGGTCGGTTAGGTTCTTT 780 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1653 AGCATCTGTGTTTTTCTTCCCAGAAGGAACACGGAGTAAGGATGGTCGGTTAGGTTCTTT 1712 Query: 781 CAAGGTAAACACAGTCTCAAGATTCTTCTTGATCATGTTTTGGTATGTGTGTTAACATAA 840 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1713 CAAGGTAAACACAGTCTCAAGATTCTTCTTGATCATGTTTTGGTATGTGTGTTAACATAA 1772 Query: 841 GAGGCTGGCTTGTGATATTACAGAAAGGCGCATTTACAGTGGCTGCGAAGACCGGAGTTG 900 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1773 GAGGCTGGCTTGTGATATTACAGAAAGGCGCATTTACAGTGGCTGCGAAGACCGGAGTTG 1832 Query: 901 CAGTAGTTCCAATAACGCTAATGGGAACAGGCAAAATCATGCCAACGGGTAGTGAAGGTA 960 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1833 CAGTAGTTCCAATAACGCTAATGGGAACAGGCAAAATCATGCCAACGGGTAGTGAAGGTA 1892 Query: 961 TACTGAACCATGGGAATGTGAGAGTTATCATCCATAAACCAATACATGGAAGCAAAGCGG 1020 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1893 TACTGAACCATGGGAATGTGAGAGTTATCATCCATAAACCAATACATGGAAGCAAAGCGG 1952 Query: 1021 ATGTTCTTTGCAACGAGGCCAGAAGCAAGATTGCAGAATCAATGGATCTCTAAGCTGATC 1080 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1953 ATGTTCTTTGCAACGAGGCCAGAAGCAAGATTGCAGAATCAATGGATCTCTAAGCTGATC 2012 Query: 1081 TCAGAAGTTGTCTTTTGCTGCGTCTCTGATGAACATTGAGAAGCTTTAATTTTTACATGT 1140 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2013 TCAGAAGTTGTCTTTTGCTGCGTCTCTGATGAACATTGAGAAGCTTTAATTTTTACATGT 2072 Query: 1141 GGAAGAATTAAATGTTGAGATCTTTTTTAGTCAAAAATTGTGATGCTCCCTTTAATGACA 1200 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2073 GGAAGAATTAAATGTTGAGATCTTTTTTAGTCAAAAATTGTGATGCTCCCTTTAATGACA 2132 Query: 1201 TTTAAAAGAAACTATCAGTTTTTGGTTTATTATAAAATTTTGTATAT 1247 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2133 TTTAAAAGAAACTATCAGTTTTTGGTTTATTATAAAATTTTGTATAT 2179 >At3g55590 68416.t05716 GDP-mannose pyrophosphorylase, putative strong similarity to GDP-mannose pyrophosphorylase from Arabidopsis thaliana [GI:3598958], Pichia angusta [GI:7331158]; contains Pfam profile PF00483 Nucleotidyl transferase Length = 1403 Plus Strand HSPs: Score = 2050 (313.6 bits), Expect = 1.7e-99, Sum P(2) = 1.7e-99 Identities = 692/1004 (68%), Positives = 692/1004 (68%), Strand = Plus / Plus
Border_2 (49488_RB)
ATTAGGCACCCCAGGCTTTACACTTTATGCTTCCGGCTCGTATGTTGTGTGGAATTGTGAGCGGATAACAATTTCACACAGGAAACAGCTATGACCATGA
TTACGCCAAGCTCGAAATTAACCCTCACTAAAGGGAACAAAAGCTGGAGCTCGCTTGAGCTTGGATCAGATTGTCGTTTCCCGCCTTCAGTTTATGCATG
CTAGCATATGCCATGGAAACTATCAGTGTTTGTAATCTACCAAAACAGATGAAATTTGTTCACAAAGGTTTAGCCAAAAAAAACCTGGTTCAGGAAAAGA
AGAGTCAGGGGTTGCAGCTCCTGAAAGATCTGCTCTCACAGTGATATCTCTTGCCAATTGACTTGATCTAGGTGATTTCTTATCAAGAAATCTGTAAGGA
TCATGTCTTAAAGAGCGGTTAGACCATTGAATGCCAGTACGTCTTGTTTCGCCCATAAATTTTTCACTCGGGACAGCTAAAGAAGAAACATGGAAAGCGA
AGCAAGTAAGGATTTAAAAGATTCATCTCAGTATCTCACGTCGAAATAGATATATGGATAAGTAACTCGATCAGATCTCAAAAACAAAATGAGTAGATCC
TATATAAAATTACAAGTCTTTATATATAGCAAGGAATGATTGAAATGATATTGTAACGCCCCGACCAGCAACAAAACCGCATCAAGGGACAATTAAAACT
ATAGTTTGATTGCCTTACCATGAAGGGAAGTAGTAAAGCTCGTCATGCCATTAGAAATGCGACCAAAGCAACAAACTTTATCCCTCGAAATCTGCATCTC
CAATGATTTC
| Start of BLAST Alignment: | NT 1023 / Intron 4 of 6 |
| First 15 bp Perfect Match: | NT 1012 / Intron 4 of 6 |
BLAST Details: Query Sequence: 49488_RB Border # Length: (810 letters) Database: Genes from AGI, Total Genome (DNA); Smallest Sum High Probability Sequences producing High-scoring Segment Pairs: Score P(N) N At4g30580 68417.t04025 phospholipid/glycerol acyltransfer... 2851 2.1e-124 1 At5g32345 68418.t03494 gypsy-like retrotransposon family ... 197 0.90 1 At2g14280 68415.t01521 non-LTR retrotransposon family (LI... 185 0.994 1 >At4g30580 68417.t04025 phospholipid/glycerol acyltransferase family protein Length = 2179 Minus Strand HSPs: Score = 2851 (433.8 bits), Expect = 2.1e-124, P = 2.1e-124 Identities = 581/594 (97%), Positives = 581/594 (97%), Strand = Minus / Plus Query: 810 GAAATCATTGGAGATGCAGATTTCGAGGGATAAAGTTTGTTGCTTTGGTCGCATTTCTAA 751 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 462 GAAATCATTGGAGATGCAGATTTCGAGGGATAAAGTTTGTTGCTTTGGTCGCATTTCTAA 521 Query: 750 TGGCATGACGAGCTTTACTACTTCCCTTCATGGTAAGGCAATCAAACTATAGTTTTAATT 691 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 522 TGGCATGACGAGCTTTACTACTTCCCTTCATGGTAAGGCAATCAAACTATAGTTTTAATT 581 Query: 690 GTCCCTTGATGCGGTTTTGTTGCTGGTCGGGGCGTTACAATATCATTTCAATCATTCCTT 631 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 582 GTCCCTTGATGCGGTTTTGTTGCTGGTCGGGGCGTTACAATATCATTTCAATCATTCCTT 641 Query: 630 GCTATATATAAAGACTTGTAATTTTATATAGGATCTACTCATTTTGTTTTTGAGATCTGA 571 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 642 GCTATATATAAAGACTTGTAATTTTATATAGGATCTACTCATTTTGTTTTTGAGATCTGA 701 Query: 570 TCGAGTTACTTATCCATATATCTATTTCGACGTGAGATACTGAGATGAATCTTTTAAATC 511 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 702 TCGAGTTACTTATCCATATATCTATTTCGACGTGAGATACTGAGATGAATCTTTTAAATC 761 Query: 510 CTTACTTGCTTCGCTTTCCATGTTTCTTCTTTAGCTGTCCCGAGTGAAAAATTTATGGGC 451 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 762 CTTACTTGCTTCGCTTTCCATGTTTCTTCTTTAGCTGTCCCGAGTGAAAAATTTATGGGC 821 Query: 450 GAAACAAGACGTACTGGCATTCAATGGTCTAACCGCTCTTTAAGACATGATCCTTACAGA 391 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 822 GAAACAAGACGTACTGGCATTCAATGGTCTAACCGCTCTTTAAGACATGATCCTTACAGA 881 Query: 390 TTTCTTGATAAGAAATCACCTAGATCAAGTCAATTGGCAAGAGATATCACTGTGAGAGCA 331 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 882 TTTCTTGATAAGAAATCACCTAGATCAAGTCAATTGGCAAGAGATATCACTGTGAGAGCA 941 Query: 330 GATCTTTCAGGAGCTGCAACCCCTGACTCTTCTTTTCCTGAACCAGGNNNNNNNNGGCTA 271 ||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 942 GATCTTTCAGGAGCTGCAACCCCTGACTCTTCTTTTCCTGAACCAGGTTTTTTTTGGCTA 1001 Query: 270 AACCTTTGTGAACAAATTTCATCTGTTTTGGTAGATTACAAAC-ACTGATAGTT 218 ||||||||||||||||||||||||||||||||||||||||| | || || ||| Sbjct: 1002 AACCTTTGTGAACAAATTTCATCTGTTTTGGTAGATTACAACCTAC--ATCGTT 1053 >At5g32345 68418.t03494 gypsy-like retrotransposon family (Athila) has a 2.2e-183 P-value blast match to GB:CAA57397 Athila ORF 1 [Arabidopsis thaliana] Length = 9717 Minus Strand HSPs: Score = 197 (35.6 bits), Expect = 2.3, P = 0.90 Identities = 141/244 (57%), Positives = 141/244 (57%), Strand = Minus / Plus