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At2g48120 SYNGENTA 54333

Genomic Sequence (from TAIR)

attcgctatgtgtcacagacactgactggggaaacaacattagattatgaaaggaaatgaagccaagatttttcagatttctttgagacatttttcaatt
gagctactagtactaagctacaccacggggtttaatttgtgaaatccgaaactagggagactaaatccgaatagatatagatagcctaagggattcgggg
ctgcaacaaaatcactcccactcactgcgaagctcgactATGGCGGCGACGTCGCTGGTTCTGACGTGCGCATCCCCTCTATTCAGCAGCCCTCGGGTTA
TTTCTGCTACGAAGAAGCTGACTACAGAGTTGTCGATTTCTACAGgtcagtttcgcggggtttaatttgtgaaatccaaaattagtttgtttcatctaaa
atgatcctctgccgatgtctcagCTAAATTCCGAAGAAGATGC◄TCGGGAAACAA◄TGATGAAGTGCTTCTAGAAGGAATGCCACCGGAGTATTACGATG
ATgttcgtctcctcatcctttttttgtctctcagtctgattttttctaagtcggttggttttttgataccagGAATGGCAAGCTCGACAGAGAGAGAAGA
CCAAAGAACTGCGGCGGATGCAGCGGGAGGAAGAAGAAGAAGAGGAGAGAAAGATTGAAGAATACCGTGAAATTGGCACGAGGTTGAAGGAATTTCCCGA
GCAAGACTTAAGGAAAGCCAGAAAGCTCGTCTCCAGCTTCATCAGAGCTGCCGAGGAAGTCGAAGAGgtaaaaatcaaagtccccttccttccttataca
agcaggcaattattattattatgtataagacaatttctgtagAGAATTGAAGAAGCAGCCGAGAAAGGAGAACTTGACGAGCTTGTCCTCATGATCATAT
GGAACCGGCTTGACCTTGCTAGGCGCGATgtaacatttttttccttgtgagttatgcgttttcatgatgaaatgttcccttagatcctgtgttgcttact
ttcagGATGAGAAGGACGCCATCAGAAGTCTTGATCTTTTGTATAGAAGAGTCGAGgtaattgtttctcttcattcttttctatgctataagatcttgag
ctgctgatgctttatatcaccatcttcaaacttactcatttgtcaaggaagattatcaactcgtattagtcagctttaggtgaaagtgaatccttatatc
gggtgtttctctatccagACAGAGATCTTAAAACGGCAAGCAAGTCCTGCAATGAAACTGCTGAATGATCTTCTAAATATGCATGATGGCTTTGAAGACG
ATGCTTGGCTCAAGGACTGCAGAAAACGAATGGCTGAGACCTTCCCCCGAGAAGACCCCTTCAGCATTCTAATGCCACCGGGATTCGACATTGATATGgt
gcgtccctttttctcttttttgtttttttttattgataaaaacctctcaacagcaagaatcaatgctgtgtttgtagCATCAAGGACAGTTGCGACCGCC
CATTGAGACTGAGACAGACAACACCCTTCTGAGAGTAGACTTTGTAAGAGAAGTGGATGCACTGCTACAGGAAGTGAGGATAGAGGAAGACGCTACAACT
GGTAGCAAAGGAGAAGGGCTTGATCCTGAAGCTATAGCACTTAAGTTTAAGCAACAGGAGAAGCAACGAACCATCCGCCAAATTGAAGCCATTCTTGATT
TAGCCCTCAACTTGAAGTGGTAGgcagttaactagaatatcaatctatacgccataataatttttttaagatagaccctagagttagattgattcaggcg
tttttgtttagaaatgaatggagtctaaataataggttttggctaaaaattccaaatccaaatgttgctgactatctctctgctcatagtctccaccaca
atcatctcttcctctttcaaagtatagtatggcctttacttttccggttccacgatacactccgccagtctcctaacagctcctcaaccaccgctctgtg
tc

Border_1 (54333_BOR_D)


TTGATNGCCCTNNTGATTCGCCAAGCTCGAAATTAACCCTACTAAAGGGAACAAAAGCTGGAGCTCGCTTGAGCTTGGATC:AGATTGTCGTTTCCCGCC
TTCAGTTTATGCATGCTAGCATATGCCATGGAAACTAGGTCAGCTCACTCAAGAACGGAATGCGCGTGACGCTCGCGGCGACGCCATTTCGCCTTTTCAG
AAATGGATAAATAGCCTTGCTTCCTATTATATCTTCCCAAATTACCAATACATTACACTAGCATCTGAATTTCATAACCAATCTCGATACACCAAATCGA
ATTCAATTCGGCGTTAATTCAGTACATTAAAAACGTCCGCAATGTGTTATTAAGTTG:CTAAGCG:CAATTTGTTTACACCGCATCTTCTTCGGAATTTA
GCTGAGACATCGGCAGAGGATCATTTTAGATGAAACAAACTAATTTTGGATTTCACAAATTAAACCCCGCGAAACTGACCTGTAGAAATCGACAACTCTG
TAGGCAGCTTCTTCGTAGCAGAAATAACCCGAGGCTGCTGAATAGA:GGGGATGCCCACCGTAAGAACCAGCGACGTCGCCGCCATANGGCGAAGCNTTC
GCAGGGGAGGTGGGGAAGTGAATTTTTGGTTGCNCGNCCCCCGAAATCCCCCTTTAGGGCCAATCCCAATAATCCCAATTTCCGGGAATTTAANGGGCCG
CCCCTTA:GGGTTTTCAGGGAATTTTCCACCAAAAATTTTAAAAACCCCCCGGTGGGGGGGGGAGGCCTTTNAAGGAAACTTTNGGGNAGGCCTCCNAAA
ATTTGNAAAAAAA

Start of BLAST Alignment:	NT 215 / Exon 2 of 7
First 15 bp Perfect Match:	NT 204 / Exon 2 of 7

BLAST Details:
Query Sequence: 54333_BOR_D 
Length: (808 letters) 
Database: Genes from AGI, Total Genome (DNA);
                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

At2g48120 68415.t05489 pale cress protein (PAC) identical...  1057  2.7e-43   1
At4g14320 68417.t02089 60S ribosomal protein L36a/L44 (RP...   181  0.99995   1



>At2g48120 68415.t05489 pale cress protein (PAC) identical to PAC [Arabidopsis
           thaliana] gi|1483213|emb|CAA65334
        Length = 1817

  Minus Strand HSPs:

 Score = 1057 (164.6 bits), Expect = 2.7e-43, P = 2.7e-43
 Identities = 241/265 (90%), Positives = 241/265 (90%), Strand = Minus / Plus

Query:   631 GNGCAACCAAAAATTCACTTCCCCACCTCCCCTGCGAANGCTTCGCCNTATGGCGGCGAC 572
             | ||  | | ||| |||||  ||||| || | |||||| ||| || | ||||||||||||
Sbjct:    99 GGGCTGCAACAAAATCACT--CCCAC-TCAC-TGCGAA-GCT-CGAC-TATGGCGGCGAC 151

Query:   571 GTCGCTGGTTCTTACGGTGGGCATCCCCTCTATTCAGCAGCC-TCGGGTTATTTCTGCTA 513
             |||||||||||| ||| || |||||||||||||||||||||| |||||||||||||||||
Sbjct:   152 GTCGCTGGTTCTGACG-TGCGCATCCCCTCTATTCAGCAGCCCTCGGGTTATTTCTGCTA 210

Query:   512 CGAAGAAGCTGCCTACAGAGTTGTCGATTTCTACAGGTCAGTTTCGCGGGGTTTAATTTG 453
             ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:   211 CGAAGAAGCTGACTACAGAGTTGTCGATTTCTACAGGTCAGTTTCGCGGGGTTTAATTTG 270

Query:   452 TGAAATCCAAAATTAGTTTGTTTCATCTAAAATGATCCTCTGCCGATGTCTCAGCTAAAT 393
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:   271 TGAAATCCAAAATTAGTTTGTTTCATCTAAAATGATCCTCTGCCGATGTCTCAGCTAAAT 330

Query:   392 TCCGAAGAAGATGCGGTGTAAACAA 368
             ||||||||||||||   | ||||||
Sbjct:   331 TCCGAAGAAGATGCTCGGGAAACAA 355


>At4g14320 68417.t02089 60S ribosomal protein L36a/L44 (RPL36aB)
        Length = 1337

  Plus Strand HSPs:

 Score = 181 (33.2 bits), Expect = 9.9, P = 0.99995
 Identities = 187/329 (56%), Positives = 187/329 (56%), Strand = Plus / Plus