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At2g03150 SYNGENTA 57679

Genomic Sequence (from TAIR)
cttgaacccttactactaacaaacatatcgttctctttactttctcttcttcacagcaaactaatcctcaaaccattctctcaagctcgtcttcttcctc
tatctgtgatttctagggttttgttttttccctttttaatctctcaattgcttagtctcttcctcttctctcaacacgtaagacacgcaaagaagaaaca
atttttcaatcttcttgtaggtaaagtccgtcaatttaatttaattttactcgcttgatcgaatcatgtatgtgaattcgaaattgtagtttagggacgt
gaaaatttcggttgattcatgttgtttttttgataaatctttgttattgttcgttcttcgtattatctctcaaagaatgtactaactaaaattacaaaat
tgaaaccagATGCATAGAGATATGTATTCTTCAAGAGGCACTGGCTACGGTCAACAGCAATACGGTTCGCAATCTGGTTATTCTCAGAATgtaagatcat
caatttcaattgaaaccaaattatgcttaattatgcttaatttatgtgtaattgttatgtagCTTGGATCTGGCTATCCTGGAAGTTCAGTGAGTGGTGG
CGCAGAAGGAGGCTCTCAGATTTCTTTGAGTTCTCGCCATCCATCAATTACAGGTGCTCCTCAAGAGACTGACATTGGTGGTGGATACAGATCTCATTTA
TCTACAGCTGCTAGTCATTACGGAACACAATATGGCTCTGTGTATGGATCAACTTCTCTTAGCAGCTCTCAGCCTTTAAGCACCAATGGTTTAGGTTCAT
CAGTTTTGGATAACCGCTCGGGATATGTCCCTACTTTACCTGATTCACCAAAGTTTGCATCTGGAAGCTATTTGTCTCCCTCGAGCCATGGTTATGGTCA
AAAGACGGACGATTTGTATTCCGATAAGCTGTCTGGTTACATTCCCGTTGATAGAAGGCAGTATGGTGAACAATCAAGCTCTTATCTCGGTAGGGAGTTG
CAAAATGAACCAACTAGGCGATATGCTGATCCATCTAATTTTGCTCGCCAGgtgcgcctactctcatatttttaagagaaaatcttatgaatttggttgg
tttctgttcaatgttgttacaattggcttgatgatactcgttattatatgattttggcagACTGACTTGTATGATCGCATTGATCAAGCATCGCTTCTCC
GAGGAGAACAATTATTAAAAATGCAGTCGCTTCATACCTCTTCTGTTGATGCAGGTGTCAACAGgtatttttcgatgattgattctattatatcggtagc
cagatttctttctagcatagatttctttttcaaatagtttgtattttttggtacatctgttatctgtattgttttcagatctgttctctcaggacctttg
ttataaagctactgtaacttcttgtcaaaactttcaataacgattgaagaaaaaacatatcttattacactgagtagcatacatttctggcagACAAACC
GATTATCTTACAGAACGAAGTTCTACTGTGCGTCATTCTGACCAAGAAGCAATGCATTATGGAGGAAGGCTTGAGTCTGATCCTCACGGTTTATCAGTAC
GCAACACATCTTCTTATGCCAGCCAACATACCCCATCGTTATTAGGAGCTGTTCCTCGGCGAAACTTAGATGACTATATTTATCCGGAGAGTTCTTCAAA
TCCTGGTTATGGTGTTAGCTTACCTCCAGGCAGGGATTATGGCACCGGGAAAGGTATCCATAGTGCAGCGTCTCTCGACTTGGACTACCCTGGTGGCATG
CTGGCTCGTGGTACTGGCGCTGCTCCTCGTGTTGATGATCTCCGGAAAGGTGACCGGGCAAGTTATCTCAGGGAGTTTGATCTAAGAGAAGAAGAGCGTC
GTCGTGAGGATCAACGCGCCAGAGATAAGGAGCGAGAACGAGAGAGGGAGCGCGAACATGACAGAGAACGAGAGCGTCAGAGGGAACGAGAAAGGCAAAG
AGCTAGGGACCGGGAGAGGGAACGCATATTGGAGAGACGGGAGAAGGAAAGACAAGGAGAAAGAGAACGTGAGCGAAAACGTGCTCTCGAAATAAAACGA
GATCGGACTCCAACAGCAAGAGCTACGTCCAAGGACACAAAGGAGCGGACTCCAGTGCCCAAATCTATTTCTAGGGATGCACGTAGTTCCTCTTTGCGGC
GGGATGCACACCATCGTGAAGCATCAATTAGgttttatttttgatctctgtcacgttcttcatctggaatacagggcattttatgttcctgcaccaggca
ctaaccttatttctgttatacctgaagGCGTTCTTCACCGATTAAGCCAATAAGAAGAGATTATGTCTGCAAGgtaataagtgttccaagagattcct
ctttcagtgatttttttgcctactcctcagggttacctcatcttcctttccattcctgcattctcgttgttttcttattgattgacttggacatctctta
gtccctcctcaattactatatcagccttgccatttatcaagataatcctttcagctttctcattctttttctgtcgacgggatatcttcctgtacttggg
cttgttatacttcctctttccttttgtggcgaatttacttggcctttcctagttgtgggtttatttgtccaagcttctgtcttcttgccacctctgggtg
ttattttgcctgcttttaaaattagtgacatatatcaggttcctcatttttgtgtctccagttagtttacctgattactagttttttttctgatggactt
cgtattgaattaaatgtggaaatgtttacaaggatgagacacttgatgcttaccactttctcaaatcaaggactttttgttatatttcccattaataaga
ttgatggtgacagagataggaggggcagagttaccttacactctgtatgtgtgatgcagtgcttaagcgcagtgtgcattattctttattaaactattgg
gtgacttatgtgcagGTTTTATCTTCGCGATTGGTTGACATGGAGAGGGATTACGTGACACTAGATAAAAGATATCCCAGGCTTTTTGTGCCTTCTGAGT
TCTCGAAGgtttctgttattctatctcccaattattatctaatccttagtggagttctaaatgattgttaacctcaaatgtactatatgtttcagGTTGT
TGTGAACTGGCCGAAACAGAAGCTTACACTTTCTATGCATACTGCTGTGAGgtgaattattctgcttcttatttacattttgtcagtcttaggattgtaa
tccttcttaactggtttaaatagatctgttctggatttttgtttcccttgcccagtccgtattgtagagttacacacattattcaagttttgtggattca
cttttgttatatactatctagttaaatgtatttgtagacctaaccatctttttttgaggacgacagTTTTGAGCATGATTACATTGAAGATGGTGGAGCT
GATGTGAAAAGTACTTCCACTAAGCCTTTAGCTTTGAAAACTGGAGGAAAAAGTGTTTGGAACGCCAAGgttggctgtttttttctttctcattgataaa
gattgcctctttaattatgtcattgctcatgtttgcacgatgtatcattgctgctattgtttcggagtatattgaaagaattgctcatgtgttatgggtt
ttatgtgctgttcagATGGTTTTGATGAGCGGGCTGAGCAGGACTGCTCTGGAAGATCTTGCTTCAGATAAATTCTTTGAGGATCGTATACCTCATATAT
GCAACATATTAAAATTCGCTGTTCTTAAAAAAGATCATTCATTCATGGCGATTGGTGGTTCCTGGGATCCCACAGATGGCATGGACCCATCAGTTGATCA
GTCTTCCTTAATTCAGACAATGCTGAGgtttgtctcttcacgtattcttttgtcattctttgctgccgttttgttcattgtctgagacttgaaaaacctt
ttcctttgcagACACTCAAAGGATAAGCTTCATCTTGATCTGAGTAACTGCCGTCACTGGAATCCATTCCTAGAGgtaggttttccttctcttggtttaa
gactgcattgagatgttggacgtgtggggacattacacttgagtattgtagctaagatagtatatataccgtacaatctctcttattttctataggtaga
ggtcgttgaagatgatatgatattggtttatccagagatttgctctatgaatacttgcaaaaattgttaatttgtgtcctgttttactgcagtttcactt
ttttgtcaatatggtagacctaggataagttataagctaacaaagcaatgttactttcttgccagtttatatggaaatctaagtagcttagctttgcctc
tcttttttggaattgacagATACATTATGACAGAGTTGGTACAGATGGAGTGTTTAGCTACAAAGAGATCACAGTACTTTTTGTCCCCGATTTATCAGAA
TGTCTTCCTTCATTTGATGTTTGGAGAACCCAATGGTTGGCACACAGGAAAGCTCTTACTGAAAGAGATCGACTACTCTCTCAGGAGGTTAAGAAAGATA
CTGTTGAAGTAACCAAGGATGCAGAGAAAAAGTCACCAGGAGATACTTCCGGCACTCCGACAACTGGAACTAAGAAGACTGTTAAAAAGATCATTAAAAG
AGTTGTTAAGAGGCCTGTCAACGATGGAAAAGCAACTGGTATGAAAGGTGAGAAGTCGGATGTTCCTGAACATGTTGCCATACCAGAGACCACAGTCCCA
AAAGAAGAGTCCACTGGTACATCTTCTAACAAAAAAATAGTGAAAAAGGTAGCTGAAACTGGAGATACCTCAGATCCCAGTGCTAAGGCTAATGAGCA
GACTCCTGCAAAGACAATTGTAAAGAAAAAAATTATTAAAAGGGTGGCTAAAAGGAAGGTTGCTGAAATAGACAACAAAATGGACGGTGACTCCAAGAAA
GACGGAGATAGTGATGAGAAAAAGGTGATGGAGGTAGGCAAGAAATCCTCTGATTCAGGTAGTGTGGAGATGAAACCGACGGCCGAATCTTTAGAAGATG
TGAAAGACGAGAATGCCTCCAAAACTGTGGATGTAAAACAGGAAACAGGATCTCCGGATACTAAGAAAAAGGAGGGTGCCTCTAGTTCAAGCAAGAAAGA
CACTAAGACAGGTGAAGACAAGAAGGCTGAAAAGAAAAACAACTCAGAGACTATGTCTGAGGGGAAGAAAATTGATAGGAATAATACTGATGAGAAAGAG
GTAAAAGAAAAGGTTACCGAGAAAGAGATAAAAGAGAGAGGTGGAAAAGATGAGTCCAGGATTCAAGTGAAGGACAGGAAAAAGTGTGAGGAACCTCCTC
GCGCTGGATTTATTCTACAGACAAAACGGAACAAAGACTCCAAAgtaggtggacaggaaattagaagtttcattacatttggtaatggctatattatggt
cgtaactgctttttttttggcagTTGCGTTCACTTTCGGCCTCTTTGGATTCGCTCTTGGATTACACTGACAAGGACCTTGATGAGTCATCATTTGAGgt
ttgtttttcccttacgttttgcttagcctgttttcgttttctttatactggaacttagtgtaccacattttgttgttacatctgaatagttttcatcaaa
ctatcttctatgttcttgcagATTTCATTGTTTGCGGAATCGCTATATGAGATGCTGCAGTATCAAATGGGTTCCCGTATCTTTGAATTTCTCAAAgtta
gtttttaattgatctttgacgttattgtgtccgagtcgcatgaacagttttcttatacttaattttttgtttccttcaagAAACTACGTGTAAAAATTGT
GAGGCAAAGAAATCAACGGAAGAGGCATCAGGAGGAGTTGTCTGTCAAGCAAAACGAAGCAAAATCCCAAGATAAGCGTCAAAAGACAGCTGAACATGAA
GACAAGGAAGCCTCGGTGATAAGCGAATCTGCTCCTGGGAAGGATGATAAAGAAACTTCAGGCAAGGAAACCGTGGACGGTAGCCGGGAAATTGCAGATA
AGGAAGCTGTAGCAAAGACCAAAGAAACTTTGGGCAGTAAAGAAGTTACTGTGGGTGAAGCTGTTAATATGGAAGTGGAGAATCAGGATGAGGAGGATGA
CGATGGTGATGACGACCCAGAGGAAGATCCTGAGGAGGATCCTGAAGAAGACCCTGAAGAAGATCCGGAAGAAGATCCAGAAGAATGCGAGGAAATGGAC
GTTGCAAATACTGAGCAAGAAGAGCCTGCTGAAGAGgtatgatttactcatttgactctttcaaattgaatccaacaacaagatgttttcttcataaatc
ttctcattttgtttcatgtctcttcttcagCCGCAGAAGAAAGAAGAAAACCTTGAGAAAACTAGTGGCACTGTTGCTGATCCTATAACTGAAGCCGAAA
CTGATAATAGAAAAGAAGAAAGAGGTCCTAACGACTCAAAAACTGAAATCAAACCCAAGTCGGAAACGGAAAAGCACGGGAAACAAGATGGAGGAACATC
TGATGCAGCAAAACGAGAAGAAACAGTTGATAAAGAGCTGTTGCAGgtaaataaataatccctacaaaacttgagaaatcggtttaaatgatactgcggt
taaggtgctaaatctttcttcactttgtttctttggctcagGCTTTCAGATTTTTTGACCGTAACCAGGCAGGCTATGTTAGGgtaagaagaagactaat
ttgtcttgtacataaagccatctcatagtctctgtgaatgcagctgaagtactgtttcgtgtaattttacagGTTGAAGATATGAGAGTAACCATTCACA
GCTTGGGAAAGTTTCTATCTCACCGTGAAGTCAAGgtaaatgtagagttttgtcatcattcttttaaacacatagaattgtgtcaattgaataaaagaat
gtgtaaatgatgttgcagGAACTTGTGCAGAGCGCTTTGTTAGAGAGCAACACTGGAAGAGATGATCGAATTTTATACAATAAACTTGTTAGATTGTCTC
TATAGaaaacaaaatacttctaataatgttctcgtcttctgtctttggaacttcctgagacattgtttgtttcctcagtagtttaattttcgactgtttt
gaatcaacaacaaattcctattgttttcattgataataacaatggattcacgatcgaggaacttgtacaataaccagtaatcttgcgagtttcttttttt
ttccatgaataataataccaaaaaattagatgtttaaggttttgttagattctacataatctaatatgctcttatatcataattaaattaataattaatc
ccacgtcaaacaaaattagaagattacagaaaatgttataaactttgcatcgaaaaatacaaatcaaggaacaaaaggagtatattagtatattgctaaa
gaagtttctagaaatatatatatcttccactaaaccctagttaaaataggatttgagtctattttccttatttctttgtgagaaaaggaaacaacatgaa
accc

Border_1 (57679_LB1D)

TTCCTGCAGACATAATCTCTTCTTATTGGCTTAATCGGTGAAGAACGCCTTCAGGTATAACAGAAATAAGGTTAGTGCCTGGTGCAGGAACATAAAATGC
CCTGTATTCCAGATGAAGAACGTGACAGAGATCAAAAATAAAACCTAATTGATGCTTCACGATGGTGTGCATCCCGCCGCAAAGAGGAACTACGTGCATC
CCTAGAAATAGATTTGGGCACTGGAGTCCGCTCCTTTGTGTCCTTGGACGTAGCTCTTGCTGTTGGAGTCCGATCTCGTTTTATTTCGAGAGCACGTTTT
CGCTCACGTTCTCTTTCTCCTTGTCTTTCCTTCTCCCGTCTCTCCAATATGCGTTCCCTCTCCCGGTCCCTAGCTCTTTGCCTTTCTCGTTCCCTCTGAC
GCTCTCGTTCTCTGTCATGTTCGCGCTCCCTCTCTCGTTCTCGCTCCTTATCTCTGGCGCGTTGATCCTCACGACGACGCTCTTCTTCTCTTAGATCAAA
CTCCCTGAGATAACTTGCCCGGTCACCTTTCCGGAGATCATCAACACGAGGAGCAGCGCCAGTACCACGAGCCAGCATGCCACCAGGGTAGTCCAAGTCG
AGAGACGCTGCACTATGGATACCTTTCCCGGTGCCATAATCCCTGCCTGGAGGTAAGCTACCAA

Start of BLAST Alignment:NT 1964 / Exon 6 of 19 (Exon 1 in 5’ UTR)
First 15 bp Perfect Match:NT 1962 / Exon 6 of 19 (Exon 1 in 5’ UTR)
BLAST Details:
Query Sequence: 57679_LB1D 
Length: (664 letters) 
Database: Genes from AGI, Total Genome (DNA);
                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

At2g03150 68415.t00234 ATP/GTP-binding protein family con...  3287  3.0e-143  1
At3g31161 68416.t03646 pseudogene, hypothetical protein        282  5.9e-07   1
At2g40650 68415.t04614 pre-mRNA splicing factor PRP38 fam...   256  0.0020    1
At1g20920 68414.t02345 DEAD box RNA helicase, putative si...   228  0.048     1


>At2g03150 68415.t00234 ATP/GTP-binding protein family contains ATP/GTP-binding
           site motif A (P-loop), PROSITE:PS00017
        Length = 7233

  Minus Strand HSPs:

 Score = 3287 (499.2 bits), Expect = 3.0e-143, P = 3.0e-143
 Identities = 659/661 (99%), Positives = 659/661 (99%), Strand = Minus / Plus

Query:   663 TGGTAGCTTACCTCCAGGCAGGGATTATGGCACCGGGAAAGGTATCCATAGTGCAGCGTC 604
             || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:  1684 TGTTAGCTTACCTCCAGGCAGGGATTATGGCACCGGGAAAGGTATCCATAGTGCAGCGTC 1743

Query:   603 TCTCGACTTGGACTACCCTGGTGGCATGCTGGCTCGTGGTACTGGCGCTGCTCCTCGTGT 544
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:  1744 TCTCGACTTGGACTACCCTGGTGGCATGCTGGCTCGTGGTACTGGCGCTGCTCCTCGTGT 1803

Query:   543 TGATGATCTCCGGAAAGGTGACCGGGCAAGTTATCTCAGGGAGTTTGATCTAAGAGAAGA 484
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:  1804 TGATGATCTCCGGAAAGGTGACCGGGCAAGTTATCTCAGGGAGTTTGATCTAAGAGAAGA 1863

Query:   483 AGAGCGTCGTCGTGAGGATCAACGCGCCAGAGATAAGGAGCGAGAACGAGAGAGGGAGCG 424
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:  1864 AGAGCGTCGTCGTGAGGATCAACGCGCCAGAGATAAGGAGCGAGAACGAGAGAGGGAGCG 1923

Query:   423 CGAACATGACAGAGAACGAGAGCGTCAGAGGGAACGAGAAAGGCAAAGAGCTAGGGACCG 364
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:  1924 CGAACATGACAGAGAACGAGAGCGTCAGAGGGAACGAGAAAGGCAAAGAGCTAGGGACCG 1983

Query:   363 GGAGAGGGAACGCATATTGGAGAGACGGGAGAAGGAAAGACAAGGAGAAAGAGAACGTGA 304
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:  1984 GGAGAGGGAACGCATATTGGAGAGACGGGAGAAGGAAAGACAAGGAGAAAGAGAACGTGA 2043

Query:   303 GCGAAAACGTGCTCTCGAAATAAAACGAGATCGGACTCCAACAGCAAGAGCTACGTCCAA 244
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:  2044 GCGAAAACGTGCTCTCGAAATAAAACGAGATCGGACTCCAACAGCAAGAGCTACGTCCAA 2103

Query:   243 GGACACAAAGGAGCGGACTCCAGTGCCCAAATCTATTTCTAGGGATGCACGTAGTTCCTC 184
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:  2104 GGACACAAAGGAGCGGACTCCAGTGCCCAAATCTATTTCTAGGGATGCACGTAGTTCCTC 2163

Query:   183 TTTGCGGCGGGATGCACACCATCGTGAAGCATCAATTAGGTTTTATTTTTGATCTCTGTC 124
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:  2164 TTTGCGGCGGGATGCACACCATCGTGAAGCATCAATTAGGTTTTATTTTTGATCTCTGTC 2223

Query:   123 ACGTTCTTCATCTGGAATACAGGGCATTTTATGTTCCTGCACCAGGCACTAACCTTATTT 64
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:  2224 ACGTTCTTCATCTGGAATACAGGGCATTTTATGTTCCTGCACCAGGCACTAACCTTATTT 2283

Query:    63 CTGTTATACCTGAAGGCGTTCTTCACCGATTAAGCCAATAAGAAGAGATTATGTCTGCAG 4
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct:  2284 CTGTTATACCTGAAGGCGTTCTTCACCGATTAAGCCAATAAGAAGAGATTATGTCTGCAA 2343

Query:     3 G 3
             |
Sbjct:  2344 G 2344


>At3g31161 68416.t03646 pseudogene, hypothetical protein
        Length = 224

  Minus Strand HSPs:

 Score = 282 (48.4 bits), Expect = 5.9e-07, P = 5.9e-07
 Identities = 116/183 (63%), Positives = 116/183 (63%), Strand = Minus / Plus


Border_2 (57679_RBU)

GCCCTGCGNGGAAATGTTACCCGCTCCATTTNCNAACACATAAANAGTGAAAAAGGTAGCTGAAACTGGAGATACCTCAGTATCCCANTGCTAAGGCTAA
TGAGCAGACTCCTGCAAAGACANTTGTAAAGAAAAAAATTATTAAAAGGGTGGCTAAAAGGAAGGTTGCTGAAATAGACAACAAAATGGACGGTGACTCC
AAGAAAGACGGAGATAGTGATGAGAAAAAGAATGAGAAAGCTGAAAGGATTATCTTGATAAATGGCAAGGCTGATATAGTAATTGAGGAGGGACTAAGAG
ATGTCCAAGTCAATCAATANGAAAACAACGAGAATGCANGAATGGAAAGGAAGATGAGGNAACCCTGAGGAGNAGGTAACACTGANAGTTTCCATGGCAT
ATGCTAGCTTGCATAAACTGAAGGNGGCGAAACGACNATCTGATCCAAGCTCAAGCNAGCTCCANCTTTTGTTCGCCTTCAGACGAGGG

Start of BLAST Alignment:NT 4392 / Exon 12 of 19
First 15 bp Perfect Match:NT 4427 / Exon 12 of 19