At2g04030 SYNGENTA 69121
Genomic Sequence (from TAIR)
caactttcatatatataatttacgaaaaaaaaaaaaaaaaacaaatattcaagatctctttcttgatatgggccaatttgatacgaaacattttccagcc ataacctttcgttttactttatacgggctataggcccattatgggttaacgtgtaggcccaataaggtgttttttcaatttggtttgcatttggtgtgtg tgtgtgtgtcagctacaatttctcaaggagaggcgcgtgtaaatcaaacggataatcctacggttttgatgaaatggcttctcgtagacctcacaatctc taaacatctcttctctttatacgctcttcttctagaaacctctcttacctcactctccttaaacctttaatagggtttttaggttactctttgttcaact actacaaactcttttctctttagagattgagagattgtaaaaaaatctcaaatcttttccttcacaactttcaaatctaATGGCTCCTGCTTTGAGTAGA AGTCTCTACACATCTCCTTTGACTTCAGTTCCAATCACTCCTGTCTCTTCTCGTCTCTCTCATCTGAGAAGCTCGTTTCTCCCACACGGCGGCGCTTTAA GAACCGGCGTTTCGTGTAGCTGGAATCTCGAAAAGAGATGTAACCGATTCGCCGTGAAGTGTGACGCCGCCGTGGCGGAGAAAGAGACCACTGAAGAAGG GTCAGGTGAGAAGTTTGAGTACCAAGCTGAGgtgggttctctttcatatctcctaaagtttcaatcttgttttctgggtatctctcaacttgatggggat ataaagttttaagatttgattgttgaaatcttatcacagGTTAGTAGATTGTTGGATTTGATTGTTCATAGCTTATACAGTCACAAGGAGGTGTTTCTCA GGGAGCTTGTAAGgtgagtcaattttgatggattgttttggaaatgatttgtgtgtttctgtcaaaatctgattttgaatgtgtctgtgtatgttcagTA ATGCAAGTGATGCTTTGGATAAGCTGAGGTTCTTGAGTGTAACAGAGCCTTCTTTGCTTGGAGATGGTGGAGATCTTGAGATTAGGATTAAGCCTGATCC TGATAACGGCACCATCACCATAACgtatgagagacttctcattttttgttttacttaagtattgaaaattgaatagaacaggtttacttagagaggtttg atgcgtatatgcagTGATACTGGTATTGGAATGACAAAGGAAGAACTTATTGATTGCCTTGGAACTATTGCTCAAAGTGGTACTTCGAAATTCTTGAAGG CTCTAAAGgttttttttccatctctttgaaaacctgttgctagcaaatctttgatgtcatgttttcggactcattgttttattgctctctttattcagGA AAACAAGGACCTTGGTGCTGACAACGGTTTGATCGGACAGTTTGGTGTTGGGTTTTACTCTGCTTTCTTAGTTGCTGAGAAGgtgaagactttcaacttt tgttttttagtgtcttctggttaatgtatttcttacgaggaatggacgtacaattgtctttgctttcagGTTGTTGTGTCCACCAAAAGCCCCAAATCTG ACAAGCAATATGTTTGGGAATCGGTTGCCGATAGTAGCTCGTATCTGATCAGAGAAGAAACAGACCCTGATAACATTCTACGTCGTGGAACACAAATCAC CTTGTATCTGAGGgtacttttctttattcattcatcctttcatttgatgcgtcagatctcttatagtttgtttgactgcttattcctggctgcagGAGGA TGATAAATACGAATTTGCGGAGTCTACAAGGATCAAGAACCTCGTGAAGAATTACTCTCAGTTCGTTGGGTTTCCTATCTATACATGGCAGGAGAAATCA AGGACTATAGAGgtgaggatgaaagttttgtttttgtaatcatattagtgtattcacattgctaatatggtttaaaatttgtaacttgtggtagGTCGAA GAGGACGAACCAGTTAAGGAAGGAGAAGAGgtaaaaaaattatgttgttttaattgtgtgtatcaactatcaaacagtcacaaccaaaagactgttctag aattttgtttactgagttgattttgttacttgtttgtttccagGGTGAGCCAAAGAAAAAGAAGACCACTAAAACTGAGAAGTATTGGGATTGGGAACTA GCCAACGAGACCAAACCGCTATGGgtaagccttggagctttagcctgcgttttgtacttttctttcaacatgtttactgattattttgtgtctttgaata gATGCGCAATTCGAAGGAAGTGGAAAAAGGAGAGTACAATGAGTTCTACAAAAAGGCTTTCAATGAGTTCTTGGATCCACTTGCTCACACACACTTCACA ACTGAGgtctttatacttatacactatacactatatttatgtcaatttatgaattcttcaattggtgcttactagtctctgtattgtcttgattattaaa gGGTGAGGTTGAGTTCAGGAGCATTTTGTACATCCCTGGGATGGGTCCTCTTAACAATGAAGATGTTACAAACCCGAAAACAAAGAACATTCGTCTCTAC GTGAAGCGTGTGTTTATCTCTGACGATTTTGATGGAGAGCTTgtgagtcttttatgggttctttcttatgtagaaatctctttagatttgtggttcaatt tttatctgactatgttacctaatctgtttgcagTTCCCGAGATATCTGAGCTTTGTGAAGGGAGTTGTGGACTCTGATGATCTTCCTCTTAATGTTTCTC GTGAAATTCTCCAAGAAAGCAGAATTgtgagtggtgcaactgttagtgatacaaatgtttatcatatatgaatatcacaaattgtaactgtactatcttt cgtgataatgttcagGTAAGAATCATGAGAAAGAGGCTCATTAGAAAAACCTTTGACATGATACAAGAAATCTCTGAGAGTGAAAACAAAGAGgtaggta tctcattatcctaattttgttttgagctcatttgaaagccagggatattcatgttgtacaaacaattctagGATTACAAGAAATTCTGGGAGAACTTTGG TAGATTCCTTAAATTGGGTTGTATTGAAGACACCGGTAACCACAAGCGTATCACACCGCTACTTAGATTCTTCAGTTCCAAGAATGAAGAGGAATTGACA AGCTTGGATGATTATATCGAGAACATGGGAGAGAACCAAAAGGCGATCTACTACCTCGCAACTGATAGTCTTAAAAGTGCCAAGTCTGCCCCTTTCTTGG AGAAACTAATCCAAAAAGATATCGAGgtatatgcttcaagacttgtttttcaacttcgagtttctgtttagatttgactttctcaccacttgcttttgtt aattatagGTTCTATATTTGGTTGAACCAATCGATGAAGTTGCTATTCAGAATTTGCAAACCTACAAAGAAAAGAAATTCGTTGATATCAGTAAAGAAGA TTTGGAACTCGgtaagtatggtttagcactgctgactgcccgcacatttctctcaaccatttgtttgtaacaaaacgtgtccattctcgcagGAGATGAA GATGAAGTAAAGGACAGGGAAGCGAAACAAGAGTTTAACCTTCTCTGTGACTGGATAAAACAGCAGCTCGGTGACAAAGTTGCAAAAGTCCAAGTCTCAA ACCGTTTGAGCTCTTCTCCTTGTGTGCTTGTCTCTGGCAAATTCGGGTGGTCAGCTAATATGGAAAGgttagtacttcagcaaaagctttataacctgaa atccacataccataaaacttatgtgcttgttcattgacttatgtgcttattcattgtgaaagGCTAATGAAGGCACAGGCTCTTGGAGACACTTCAAGCC TGGAGTTCATGAGAGGTAGGAGAATACTAGAGATCAATCCAGATCATCCCATCA◄TCAAAGACTTGAACgtaagtgt►gt►ggtataatattctctcaga aatct◄cttgtctcgaaaaagccttattaatttttgtattcttttggtacagGCTGCTTGTAAGAATGCACCAGAGAGCACTGAAGCAACAAGAGTGGTC GATCTCTTGTATGACACTGCTATAATATCAAGTGGATTCACTgtaagaaatctgaaacctttcttgtttcccagtaaaagtcttggaccattttactcac ttatatgtgtttgttgtacagCCTGATAGCCCGGCCGAGCTCGGGAACAAGATATATGAGATGATGGCAATGGCGGTTGGAGGAAGATGGGGCAGAGTTG AAGAAGAAGAAGAAAGCTCGACTGTGAATGAAGGAGATGACAAAAGCGGAGAAACAGAGGTAGTTGAACCATCTGAAGTGAGGGCAGAGAGTGATCCTTG GCAAGATTGAtccttttttaccttcttttgtttgcagtgatttttttttgacagaacgctttatctttccattagcagtatcatgggcctaatgaaagcc cataattaaatcacgcgtgaacgagatttatccaatacagtatttgtagtttttttttgataattaaaataattttagagaatttacacaaaaaaagctt ttaacaaaaatatttacgaatatttgaaaaatatttgcatttgagttgtattaaatattctgaatttacatcctcttattattaaaaagaaaatacaaat tgaaaaatagtctaatctgccatcaattttcaattttggattttgtacattattaatcaaaatcgtctatggtaatttggtcatcactctatattcctta aata
Border_1 (69121_LB1D)
GCCTTTTCAGAAATGGATAAATAGCCTTGCTTCCTATTATATCTTCCCAAATTACCAATACATTACACTAGCATCTGAATTTCATAACCAATCTCGATAC
ACCAAATCGAATTCAATTCGGCGTTAATTCAGTACATTAAAAACGTCCGCAATGTGTTATTAAGTTGTCTAAGCGTCAATTTGTTTACACCACAATATTC
TCCTACCTTAATGATGGGATGATCTGGATTGATCTCTAGTATTCTCCTACCTCTCATGAACTCCAGGCTTGAAGTGTCTCCAAGAGCCTGTGCCTTCATT
AGCCTTTCACAATGAATAAGCACATAAGTCAATGAACAAGCACATAAGTTTTATGGTATGTGGATTTCAGGTTATAAAGCTTTTGCTGAAGTACTAACCT
TTCCATATTAGCTGACCACCCGAATTTSCMARARACAAGCACACAAGGAGAAGAGCTCAAACGGTTTGAGACTTGGACTTTTGCAACTTTGTCACCGAGC
TGCTGTTTTATCCAGTCACAGAGAAGGTTAAACTCTTGTTTCGCTTCCCTGTCCTTTACTTCATCTTCATCN
| Start of BLAST Alignment: | NT 3523 / Intron 17 of 18 |
| First 15 bp Perfect Match: | NT 3475 / Exon 17 of 19 |
BLAST Details: Query Sequence: 69121_LB1D Length: (572 letters) Database: Genes from AGI, Total Genome (DNA); Smallest Sum High Probability Sequences producing High-scoring Segment Pairs: Score P(N) N At2g04030 68415.t00330 heat shock protein, putative stron... 1813 1.3e-76 1 At3g07770 68416.t00849 heat shock protein-related strong ... 629 1.2e-22 1 At4g24190 68417.t03245 shepherd protein (SHD) / clavata f... 208 0.27 1 At1g33420 68414.t03717 PHD finger family protein contains... 193 0.80 1 >At2g04030 68415.t00330 heat shock protein, putative strong similarity to heat shock protein [Arabidopsis thaliana] GI:1906830; contains Pfam profiles PF02518: ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein, PF00183: Hsp90 protein Length = 4205 Minus Strand HSPs: Score = 1813 (278.1 bits), Expect = 1.3e-76, P = 1.3e-76 Identities = 387/412 (93%), Positives = 391/412 (94%), Strand = Minus / Plus Query: 571 GATGAAGATGAAGTAAAGGACAGGGAAGCGAAACAAGAGTTTAACCTTCTCTGTGACTGG 512 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3199 GATGAAGATGAAGTAAAGGACAGGGAAGCGAAACAAGAGTTTAACCTTCTCTGTGACTGG 3258 Query: 511 ATAAAACAGCAGCTCGGTGACAAAGTTGCAAAAGTCCAAGTCTCAAACCGTTTGAGCTCT 452 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3259 ATAAAACAGCAGCTCGGTGACAAAGTTGCAAAAGTCCAAGTCTCAAACCGTTTGAGCTCT 3318 Query: 451 TCTCCTTGTGTGCTTGTYTYTKGSAAATTCGGGTGGTCAGCTAATATGGAAAGGTTAGTA 392 |||||||||||||||||+|+|+|+|||||||||||||||||||||||||||||||||||| Sbjct: 3319 TCTCCTTGTGTGCTTGTCTCTGGCAAATTCGGGTGGTCAGCTAATATGGAAAGGTTAGTA 3378 Query: 391 CTTCAGCAAAAGCTTTATAACCTGAAATCCACATACCATAAAACTTATGTGCTTGTTCAT 332 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3379 CTTCAGCAAAAGCTTTATAACCTGAAATCCACATACCATAAAACTTATGTGCTTGTTCAT 3438 Query: 331 TGACTTATGTGCTTATTCATTGTGAAAGGCTAATGAAGGCACAGGCTCTTGGAGACACTT 272 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3439 TGACTTATGTGCTTATTCATTGTGAAAGGCTAATGAAGGCACAGGCTCTTGGAGACACTT 3498 Query: 271 CAAGCCTGGAGTTCATGAGAGGTAGGAGAATACTAGAGATCAATCCAGATCATCCCATCA 212 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3499 CAAGCCTGGAGTTCATGAGAGGTAGGAGAATACTAGAGATCAATCCAGATCATCCCATCA 3558 Query: 211 TTAAGGTAGGAGAATATT-GTG-GTG-TAAACAAATTGACGCTTAGACAACT 163 | || | | ||| | ||| ||| || | | ||| | || ||| | || Sbjct: 3559 TCAAAG-ACTTGAACGTAAGTGTGTGGTATA-ATATT--CTCTCAGAAATCT 3606 >At3g07770 68416.t00849 heat shock protein-related strong similarity to heat-shock protein [Secale cereale] GI:556673; contains Pfam profiles PF02518: ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein, PF00183: Hsp90 protein Length = 4611 Minus Strand HSPs: Score = 629 (100.4 bits), Expect = 1.2e-22, P = 1.2e-22 Identities = 241/365 (66%), Positives = 243/365 (66%), Strand = Minus / Plus
Border_2 (69121_LB2U)
GCCTTTTCAGAAATGGATAAATAGCCTTGCTTCCTATTATATCTTCCCAAATTACCAATACATTACACTAGCATCTGAATTTCATAACCAATCTCGATAC
ACCAAATCGAATTCAATTCGGCGTTAATTCAGTACATTAAAAACGTCCGCAATGTGTTATTAAGTTGTCTAAGCGTCAATTTGTTTACACCACAATATAT
CCTGGCTTAGAGGTATAATATTCTCTCAGAAATCTCTTGTCTCGAAAAAGCCTTATTAATTTTTGTATTCTTTTGGTACAGGCTGCTTGTAAGAATGCAC
CAGAGAGCACTGAAGCAACAAGAGTGGTCGATCTCTTGTATGACACTGCTATAATATCAAGTGGATTCACTGTAAGAAATCTGAAACCTTTCTTGTTTCC
CAGTAAAAGTCTTGGACCATTTTACTCACTTATATGTGTTTGTTGTACAGCCTGATAGCCCGGCCGAGCTCGGGAACAAGATATATGAGATGATGGCAAT
GGCGGTTGGAGGAAGATGGGGCAGAGTTGAAGAAGAAGAAGAAAGCTCGACTGTGAATGAAGGAGATGACAAAAGCGGAGAAACAGAGGTAGTTGAACCA
TCTGAAGTGAGGGCAGAGAGTGATCCTTGGCAAGATTGATCCTTTTTTACCTTCTTTTGTTTGCAGTGATTTTTTTTTGACAGAACGCTTTATCTTTCCA
TTAGCAGTATCATGGGCCTAATGAAAGCCCATAATTAAATCACGCGTGAACGAGA
| Start of BLAST Alignment: | NT 3497 / Intron 17 of 18 |
| First 15 bp Perfect Match: | NT 3499 / Intron 17 of 18 |
BLAST Details: Query Sequence: 69121_LB2U Length: (755 letters) Database: Genes from AGI, Total Genome (DNA); Smallest Sum High Probability Sequences producing High-scoring Segment Pairs: Score P(N) N At2g04030 68415.t00330 heat shock protein, putative stron... 2462 4.1e-107 1 At3g07770 68416.t00849 heat shock protein-related strong ... 264 0.0011 1 At4g26290 68417.t03518 expressed protein 177 0.072 1 At5g03500 68418.t00283 transcriptional co-activator-relat... 215 0.22 1 >At2g04030 68415.t00330 heat shock protein, putative strong similarity to heat shock protein [Arabidopsis thaliana] GI:1906830; contains Pfam profiles PF02518: ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein, PF00183: Hsp90 protein Length = 4205 Plus Strand HSPs: Score = 2462 (375.4 bits), Expect = 4.1e-107, P = 4.1e-107 Identities = 508/546 (93%), Positives = 508/546 (93%), Strand = Plus / Plus Query: 210 GAGGTATAATATTCTCTCAGAAATCTCTTGTCTCGAAAAAGCCTTATTAATTTTTGTATT 269 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3581 GTGGTATAATATTCTCTCAGAAATCTCTTGTCTCGAAAAAGCCTTATTAATTTTTGTATT 3640 Query: 270 CTTTTGGTACAGGCTGCTTGTAAGAATGCACCAGAGAGCACTGAAGCAACAAGAGTGGTC 329 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3641 CTTTTGGTACAGGCTGCTTGTAAGAATGCACCAGAGAGCACTGAAGCAACAAGAGTGGTC 3700 Query: 330 GATCTCTTGTATGACACTGCTATAATATCAAGTGGATTCACTGTAAGAAATCTGAAACCT 389 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3701 GATCTCTTGTATGACACTGCTATAATATCAAGTGGATTCACTGTAAGAAATCTGAAACCT 3760 Query: 390 TTCTTGTTTCCCAGTAAAAGTCTTGGACCATTTTACTCACTTATATGTGTTTGTTGTACA 449 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3761 TTCTTGTTTCCCAGTAAAAGTCTTGGACCATTTTACTCACTTATATGTGTTTGTTGTACA 3820 Query: 450 GCCTGATAGCCCGGCCGAGCTCGGGAACAAGATATATGAGATGATGGCAATGGCGGTTGG 509 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3821 GCCTGATAGCCCGGCCGAGCTCGGGAACAAGATATATGAGATGATGGCAATGGCGGTTGG 3880 Query: 510 AGGAAGATGGGGCAGAGTTGAAGAAGAAGAAGAAAGCTCGACTGTGAATGAAGGAGATGA 569 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3881 AGGAAGATGGGGCAGAGTTGAAGAAGAAGAAGAAAGCTCGACTGTGAATGAAGGAGATGA 3940 Query: 570 CAAAAGCGGAGAAACAGAGGTAGTTGAACCATCTGAAGTGAGGGCAGAGAGTGATCCTTG 629 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3941 CAAAAGCGGAGAAACAGAGGTAGTTGAACCATCTGAAGTGAGGGCAGAGAGTGATCCTTG 4000 Query: 630 GCAAGATTGATCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGACAGAACGCT 689 |||||||||||| ||||||||||| Sbjct: 4001 GCAAGATTGATCCTTTTTTACCTTCTTTTGTTTGCAGTGATTTTTTTTTGACAGAACGCT 4060 Query: 690 TTATCTTTCCATTAGCAGTATCATGGGCCTAATGAAAGCCCATAATTAAATCACGCGTGA 749 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4061 TTATCTTTCCATTAGCAGTATCATGGGCCTAATGAAAGCCCATAATTAAATCACGCGTGA 4120 Query: 750 ACGAGA 755 |||||| Sbjct: 4121 ACGAGA 4126 >At3g07770 68416.t00849 heat shock protein-related strong similarity to heat-shock protein [Secale cereale] GI:556673; contains Pfam profiles PF02518: ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein, PF00183: Hsp90 protein Length = 4611 Plus Strand HSPs: Score = 264 (45.7 bits), Expect = 0.0011, P = 0.0011 Identities = 170/279 (60%), Positives = 170/279 (60%), Strand = Plus / Plus