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At5g10330 SYNGENTA 69725

Genomic Sequence (from TAIR)

atcgccgggaaatcgatctgacctactctcacgtcttcacctcgtcaagagtagacttttttatttaacactacacttggaagactttcttacctactct
cactatcgacccgattcttcagaaccgggttttggattcaatttcggataacccctaaattggtacgccaattctcagtcactcagaataaaaaaaaggc
tcacctttgtccacgaatcgcaagtgagtcatagaaaaaccgaagcttttgactgatctcagtcactttagtctccctgctcacgacccttctcgtctac
ttagggttatctccatttgcccctcttcctgtcaactttcaggtattacttgtcaataagatgtgaaattgagtatgtgcatcagatgtttcctctagat
tgaactgattccacctttgatatgcgcagacacgaaaactgATGGGTGTGATCAATGTTCAGGGCTCTCCATCGTTCTCTATTCATTCTTCAGAGTCAAA
TCTTCGAAAGTCTCGAGCTTTGAAGAAACCC◄TTT◄TGCTCAA►TCCGGAATAGGGTTTATTGTGCTCAGTCTTCAAGTGCAGCTGTAGACGAATCCAAG
AA►TATAACTATGGGAGACTCTTTTATCCGTCCACATTTGAGACAATTGGCTGCTTATCAGCCAATTTTACCCTTTGAGgtgatatttagattgcattga
atttattttttgacaattatagatgattggattgggttggattggatttatcttctaaaatgtgtatgtttgtttgtaattagGTATTGTCTGCTCAATT
AGGAAGAAAGCCTGAGGATATTGTCAAGTTAGATGCTAATGAGAACCCATATGGTCCTCCTCCAGAGgcaagtctatatctttctttcactcattcatag
atatgttgatgactggaaaaaggataattttgttagttagttagttgtcctctctaacttcaggtttcagaagctctgtgtagGTTTTTGAAGCATTAGG
CAATATGAAATTCCCTTACGTTTATCCTGATCCACAAAGTCGTAGACTTCGTGATGCACTGGCTCAAGACTCTGGTTTGGAGTCTGAATACATACTTGTA
GGCTGTGGTGCTGACGAACTTATTGATTTGATCATGAGgtatggcttcaagatttgatttttcagtcaattgagcttctaccagaatcgtattttctgac
taaaactctgtttcttgcagATGCGTGTTAGATCCTGGGGAGAAGATTATAGATTGTCCTCCAACTTTCTCAATGTATGTGTTTGATGCGGCTGTGAATG
GAGCAGGTGTCATTAAAGgtgaaagatttacgattttcatgtgtttcattctcttcgattttgcttctctctctctctctgaatgtatagtcttaaacat
gttggtctttgtttgtttcacagTTCCAAGAAACCCCGATTTCAGCTTGAATGTAGACCGCATCGCTGAAGTTGTAGAACTAGAAAAACCCAAATGCATA
TTCCTAACTTCTCCCAACAATCCAGATGGGAGgtaaaacaccaccactctaaacaactcgaaaggaaaaattctttttagtagtccgtcatgattattaa
tccgagtttctctttgatacagTATCATCAGCGAGGACGATCTGTTGAAGATTCTAGAAATGCCAATACTTGTTGTTCTAGATGAAGCTTACATCGAATT
CTCAGGAGTTGAATCACGCATGAAATGGGTGAAGAAGTATGAAAACCTTATCGTTCTCCGCACATTTAGCAAACGAGCTGgtaaattttggtttatcact
ctatataatctaaacattacagatataaagtctgcatctaagaattctgatgatatttcagGTTTAGCCGGGCTTCGAGTTGGATATGGAGCGTTTCCGT
TGAGTATAATCGAATACCTGTGGAGAGCAAAGCAACCGTACAATGTCTCTGTTGCAGGGGAAGTAGCTGCTTTAGCAGCACTCTCAAACGGGAAATACTT
GGAAGATGTGAGAGACGCCTTGGTACGGGAAAGAGAGAGACTGTTCGGGCTATTAAAAGAAGTTCCTTTCTTGAATCCATATCCGAGCTATTCGAATTTC
ATTCTCTGTGAGGTTACATCTGGAATGGATGCAAAGAAGCTGAAAGAGGATTTGGCGAAAATGGGTGTGATGGTTCGTCATTACAACAGTCAAGAGCTTA
AAGGTTATGTTCGAGTTTCTGCTGGAAAGCCTGAACATACTGATGTTCTCATGGAGTGTCTTAAGCAATTTTATTGActtccccatttgtttgggaattc
ttaaaacagccacacaaaaataaaattgattttttttccctccttttttgtttgttttcacttgttggattcagtgtttgaccaaaaaaaaaaggattca
ttgtttttgtttcagttaacaaggagaagcttttgttgtattgtactttttggtttgaaaatgggcctaagtccatatgtaaacttgttgatgaagccca
ttaaaactgaaacttgactaattcgggtcggactcaaatcaaaaacatacagtatgttgaaaaagatgaagtgaagacaatggttggttcctataatcca
taacgtaggtttatcttggttcaattttcaactttaatttcttatacataaaccgaccagccgaactcaggctcaatttcccagatcgccccaagagtca
gctt

Border_1 (69725_LB2)


GCCTTTTCAGAAATGGATAAATAGCCTTGCTTCCTATTATATCTTCCCAAATTACCAATACATTACACTAGCATCTGAATTTCATAACCAATCTCGATAC
ACCAAATCGAATTCAATTCGGCGTTAATTCAGTACATTAAAAACGTCCGCAATGTGTTGTCTAAGTTGTTAATGGGTTTCTTCAAAGCTCGAGACTTTCG
AAGATTTGACTCTGAAGAATGAATAGAGAACGATGGAGAGCCCTGAACATTGATCACACCCATCAGTTTTCGTGTCTGCGCATATCAAAGGTGGAATCAG
TTCAATCTAGAGGAAACATCTGATGCACATACTCAATTTCACATCTTATTGACAAGTAATACCTGAAAGTTGACAGGAAGAGGGGCAAATGGAGATAACC
CTAAGTAGACGAGAAGGGTCGTGAGCAGGGAGACTAAAGTGACTGAGATCAGTCAAAAGCTTCGGTTTTTCTATGACTCACTTGCGATTCGTGGACAAAG
GTGAG

Start of BLAST Alignment:	NT 93 / Exon 2 of 8 (Intron 1 in 5’ UTR)
First 15 bp Perfect Match:	NT 90 / Exon 2 of 8 (Intron 1 in 5’ UTR)

BLAST Details:
Query Sequence: 69725_LB2 
Length: (505 letters) 
Database: Genes from AGI, Total Genome (DNA);
                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

At5g10330 68418.t01087 histidinol-phosphate aminotransfer...  1556  6.4e-66   1
At1g71920 68414.t07610 histidinol-phosphate aminotransfer...   456  6.3e-15   1
At5g37380 68418.t04167 DNAJ heat shock N-terminal domain-...   190  0.80      1
At4g17070 68417.t02422 expressed protein                       178  0.998     1


>At5g10330 68418.t01087 histidinol-phosphate aminotransferase, putative similar
           to histidinol-phosphate aminotransferase GB:CAA70403 [GI:335562]
           from [Nicotiana tabacum], Nicotiana plumbaginifolia [GI:12055099]
        Length = 2219

  Minus Strand HSPs:

 Score = 1556 (239.5 bits), Expect = 6.4e-66, P = 6.4e-66
 Identities = 312/313 (99%), Positives = 312/313 (99%), Strand = Minus / Plus

Query:   483 AAGTGAGTCATAGAAAAACCGAAGCTTTTGACTGATCTCAGTCACTTTAGTCTCCCTGCT 424
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:     1 AAGTGAGTCATAGAAAAACCGAAGCTTTTGACTGATCTCAGTCACTTTAGTCTCCCTGCT 60

Query:   423 CACGACCCTTCTCGTCTACTTAGGGTTATCTCCATTTGCCCCTCTTCCTGTCAACTTTCA 364
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:    61 CACGACCCTTCTCGTCTACTTAGGGTTATCTCCATTTGCCCCTCTTCCTGTCAACTTTCA 120

Query:   363 GGTATTACTTGTCAATAAGATGTGAAATTGAGTATGTGCATCAGATGTTTCCTCTAGATT 304
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:   121 GGTATTACTTGTCAATAAGATGTGAAATTGAGTATGTGCATCAGATGTTTCCTCTAGATT 180

Query:   303 GAACTGATTCCACCTTTGATATGCGCAGACACGAAAACTGATGGGTGTGATCAATGTTCA 244
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:   181 GAACTGATTCCACCTTTGATATGCGCAGACACGAAAACTGATGGGTGTGATCAATGTTCA 240

Query:   243 GGGCTCTCCATCGTTCTCTATTCATTCTTCAGAGTCAAATCTTCGAAAGTCTCGAGCTTT 184
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:   241 GGGCTCTCCATCGTTCTCTATTCATTCTTCAGAGTCAAATCTTCGAAAGTCTCGAGCTTT 300

Query:   183 GAAGAAACCCATT 171
             |||||||||| ||
Sbjct:   301 GAAGAAACCCTTT 313


>At1g71920 68414.t07610 histidinol-phosphate aminotransferase, putative similar
           to histidinol-phosphate aminotransferase GB:CAA70403 [GI:335562]
           from [Nicotiana tabacum], Nicotiana plumbaginifolia [GI:12055099]
        Length = 1994

  Minus Strand HSPs:

 Score = 456 (74.5 bits), Expect = 6.3e-15, P = 6.3e-15
 Identities = 92/93 (98%), Positives = 92/93 (98%), Strand = Minus / Plus

Border_2 (69725_LB1)


GCCTTTTCAGAAATGGATAAATAGCCTTGCTTCCTATTATATCTTCCCAAATTACCAATACATTACACTAGCATCTGAATTTCATAACCAATCTCGATAC
ACCAAATCGAATTCAATTCGGCGTTAATTCAGTACATTAAAAACGTCCGCAATGTGTTATTAAGTTGTCTAAGCGTCAATTTGTTTACACCACAATATAT
AACTATGGGAGACTCTTTTATCCGTCCACATTTGAGACAATTGGCTGCTTATCAGCCAATTTTACCCTTTGAGGTGATATTTAGATTGCATTGAATTTAT
TTTTTGACAATTATAGATGATTGGATTGGGTTGGATTGGATTTATCTTCTAAAATGTGTATGTTTGTTTGTAATTAGGTATTGTCTGCTCAATTAGGAAG
AAAGCCTGAGGATATTGTCAAGTTAGATGCTAATGAGAACCCATATGGTCCTCCTCCAGAGGCAAGTCTATATCTTTCTTTCACTCATTCATAGATATGT
TGATGACTGGAAAAAGGATAATTTTGTTAGTTAGTTAGTTGTCCTCTCTAACTTCAGGTTTCAGAAGCTCTGTGTAGGTTTTTGAAGCATTAGGCAATAT
GAAATTCCCTTACGTTTATCCTGATCCACAAAGTCGTAGACTTCGTGATGCACTGGCTCAAGACTCTGGTTTGGAGTCTGAATACATACTTGTAGGCTGT
GGTGCTGACGAACTTATTGATTTGATCATGAGGTATGGCTTCAAGATTTGATTTTTCAGTCAATTGAGCTTCTACCAGAATCGTATTTTCTGACTAAAAC
TCTGTTTCTTGCAGATGCGTGTTAGATCCTGGGGAGAAGATTATAGATTG

Start of BLAST Alignment:	NT 100 / Exon 2 of 8 (Intron 1 in 5’ UTR)
First 15 bp Perfect Match:	NT 158 / Exon 2 of 8 (Intron 1 in 5’ UTR)

BLAST Details:
Query Sequence: 69725_LB1 
Length: (850 letters) 
Database: Genes from AGI, Total Genome (DNA);
                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

At5g10330 68418.t01087 histidinol-phosphate aminotransfer...  3294  2.0e-144  1
At1g71920 68414.t07610 histidinol-phosphate aminotransfer...  3294  2.3e-144  1
At5g24440 68418.t02613 RNA-binding protein, putative           236  0.032     1
At1g18460 68414.t02056 lipase family protein similar to t...   230  0.065     1


>At5g10330 68418.t01087 histidinol-phosphate aminotransferase, putative similar
           to histidinol-phosphate aminotransferase GB:CAA70403 [GI:335562]
           from [Nicotiana tabacum], Nicotiana plumbaginifolia [GI:12055099]
        Length = 2219

  Plus Strand HSPs:

 Score = 3294 (500.3 bits), Expect = 2.0e-144, P = 2.0e-144
 Identities = 686/711 (96%), Positives = 686/711 (96%), Strand = Plus / Plus

Query:   146 TCCGCAAT-GTGTT-ATTAAGTT--GTCTAAGCGTCAATTTGTTTAC-ACCACAATA-TA 199
             |||| ||| | ||| |||  | |  ||||    ||  |  |||  || |   ||| | ||
Sbjct:   321 TCCGGAATAGGGTTTATTGTGCTCAGTCTTCAAGTGCAGCTGTAGACGAATCCAAGAATA 380

Query:   200 TAACTATGGGAGACTCTTTTATCCGTCCACATTTGAGACAATTGGCTGCTTATCAGCCAA 259
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:   381 TAACTATGGGAGACTCTTTTATCCGTCCACATTTGAGACAATTGGCTGCTTATCAGCCAA 440

Query:   260 TTTTACCCTTTGAGGTGATATTTAGATTGCATTGAATTTATTTTTTGACAATTATAGATG 319
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:   441 TTTTACCCTTTGAGGTGATATTTAGATTGCATTGAATTTATTTTTTGACAATTATAGATG 500

Query:   320 ATTGGATTGGGTTGGATTGGATTTATCTTCTAAAATGTGTATGTTTGTTTGTAATTAGGT 379
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:   501 ATTGGATTGGGTTGGATTGGATTTATCTTCTAAAATGTGTATGTTTGTTTGTAATTAGGT 560

Query:   380 ATTGTCTGCTCAATTAGGAAGAAAGCCTGAGGATATTGTCAAGTTAGATGCTAATGAGAA 439
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:   561 ATTGTCTGCTCAATTAGGAAGAAAGCCTGAGGATATTGTCAAGTTAGATGCTAATGAGAA 620

Query:   440 CCCATATGGTCCTCCTCCAGAGGCAAGTCTATATCTTTCTTTCACTCATTCATAGATATG 499
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:   621 CCCATATGGTCCTCCTCCAGAGGCAAGTCTATATCTTTCTTTCACTCATTCATAGATATG 680

Query:   500 TTGATGACTGGAAAAAGGATAATTTTGTTAGTTAGTTAGTTGTCCTCTCTAACTTCAGGT 559
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:   681 TTGATGACTGGAAAAAGGATAATTTTGTTAGTTAGTTAGTTGTCCTCTCTAACTTCAGGT 740

Query:   560 TTCAGAAGCTCTGTGTAGGTTTTTGAAGCATTAGGCAATATGAAATTCCCTTACGTTTAT 619
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:   741 TTCAGAAGCTCTGTGTAGGTTTTTGAAGCATTAGGCAATATGAAATTCCCTTACGTTTAT 800

Query:   620 CCTGATCCACAAAGTCGTAGACTTCGTGATGCACTGGCTCAAGACTCTGGTTTGGAGTCT 679
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:   801 CCTGATCCACAAAGTCGTAGACTTCGTGATGCACTGGCTCAAGACTCTGGTTTGGAGTCT 860

Query:   680 GAATACATACTTGTAGGCTGTGGTGCTGACGAACTTATTGATTTGATCATGAGGTATGGC 739
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:   861 GAATACATACTTGTAGGCTGTGGTGCTGACGAACTTATTGATTTGATCATGAGGTATGGC 920

Query:   740 TTCAAGATTTGATTTTTCAGTCAATTGAGCTTCTACCAGAATCGTATTTTCTGACTAAAA 799
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:   921 TTCAAGATTTGATTTTTCAGTCAATTGAGCTTCTACCAGAATCGTATTTTCTGACTAAAA 980

Query:   800 CTCTGTTTCTTGCAGATGCGTGTTAGATCCTGGGGAGAAGATTATAGATTG 850
             |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:   981 CTCTGTTTCTTGCAGATGCGTGTTAGATCCTGGGGAGAAGATTATAGATTG 1031


>At1g71920 68414.t07610 histidinol-phosphate aminotransferase, putative similar
           to histidinol-phosphate aminotransferase GB:CAA70403 [GI:335562]
           from [Nicotiana tabacum], Nicotiana plumbaginifolia [GI:12055099]
        Length = 1994

  Plus Strand HSPs:

 Score = 3294 (500.3 bits), Expect = 2.3e-144, P = 2.3e-144
 Identities = 686/711 (96%), Positives = 686/711 (96%), Strand = Plus / Plus