OSU  Syngenta  VBI
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At1g12770 SYNGENTA 8388

Genomic Sequence (from TAIR)
tgtatgttagccatttagattgcctcagagttttttggtttcaccctgagttagaaattgtgagtctcggcctgatatattagaatgcttttggccggac
tagagtggggttttgttgtgtaaactgccacatgctgctaaattggcttgttaggtgatgatgcttttcatgcccgccaggtgttcgacgaattgcctca
ttaattttcctcggcttgtttcttaatattttttggcgttttataaatctgattcctttaagatatatctcattcgatattagtattactagatttaaga
aaatcagtagtttgtctactaaatcaacaaagttgatgtctttttatttcagccttgtcggtgtatctgcgaatagtatgttcttattgctgtctaattt
ggattccatgtgctttgcaggctgttttgagcaaacgctgtgataaagaggctttctttcttgctagcaagtacacacgagtgacATGGCGGCATCA
ACTTCAACCCGATTCCTTGTTCTGCTCAAAGATTTTTCTGCCTTCAGAAAGATATCATGGACTTGTGCTGCAACTAATTTTCACCGCCAATCTCGTTTTT
TATGCCATGTTGCGAAAGAAGACGGGTCTCTTACTCTTGCAAGCCTTGATTTGGGGAACAAACCACGGAAATTTGGGAAGGGTAAGGCGATGAAGCTTGA
GGGAAGTTTTGTTACTGAAATGGGTCAAGGTAAGGTAAGAGCGGTAAAGAACGATAAAATGAAAGTTGTCAAGGAAAAAAAGCCAGCTGAGATAGTGTCT
CCTTTGTTTTCTGCAAAATCCTTTGAGGAGCTTGGCCTCCCGGATTCCTTGTTAGACAGTTTGGAAAGAGAAGGTTTCTCTGTCCCAACAGATGTCCAAT
CAGCAGCTGTCCCGGCAATAATCAAAGGTCACGATGCAGTGATTCAGTCTTACACAGGATCTGGCAAAACATTAGCTTATCTGCTTCCAATATTGTCCGA
AATTGGTCCTCTAGCAGAAAAATCTAGAAGTTCGCACAGTGAAAATGATAAGAGGACTGAGATTCAGGCAATGATCGTGGCTCCATCAAGAGAACTCGGT
ATGCAGATAGTAAGAGAGGTAGAGAAACTGCTCGGACCTGTTCACCGTAGAATGGTTCAGCAGTTGGTAGGAGGTGCAAACCGAATGAGGCAAGAAGAGG
CCCTTAAGAAAAATAAACCTGCAATTGTTGTTGGCACTCCCGGGAGAATTGCAGAGATAAGCAAAGGTGGAAAATTGCACACTCATGGGTGTAGATTCTT
GGTGCTAGACGAAGTCGATGAGCTTTTATCGTTTAATTTCCGAGAAGATATCCATCGAATACTAGAACATGTAGGAAAGAGATCTGGGGCTGGTCCTAAA
GGAGAAGTCGATGAACGGGCTAACCGGCAGACCATTCTAGTCTCTGCAACTGTGCCATTCTCGGTTATCCGAGCAGCTAAAAGCTGGAGTCACGAGCCGG
TTCTTGTCCAAGCCAACAAAGTCACTCCTCTTGATACCGTTCAACCATCTGCACCGGTAATGAGCTTGACTCCCACAACTTCTGAAGCTGATGGCCAGAT
TCAGACTACTATTCAGAGCTTACCTCCAGCTTTAAAACACTATTACTGCATCTCAAAGCATCAACACAAAGTCGACACGTTAAGGAGATGCGTTCACGCC
CTCGATGCCCAATCGGTTATAGCTTTCATGAACCACTCAAGGCAGCTCAAAGATGTGGTCTACAAACTCGAAGCTCGTGGTATGAATTCAGCTGAGATGC
ACGGAGATCTCGGGAAGCTAGGGAGATCAACAGTTCTAAAGAAGTTCAAGAACGGGGAAATCAAGGTACTTGTGACAAACGAGCTCTCTGCCCGGGGTCT
GGATGTTGCGGAATGTGATCTGGTGGTGAATCTTGAGCTTCCAACTGATGCGGTTCACTATGCTCATCGAGCTGGGAGAACAGGGAGGCTGGGAAGGAAA
GGGACGGTGGTAACAGTGTGCGAGGAATCACAAGTGTTTATAGTGAAGAAGATGGAGAAGCAGCTTGGTTTGCCTTTCTTGTATTGTGAGTTTGTTGATG
GAGAGCTTGTTGTCACTGAGGAAGATAAAGCTATTATAAGgtgaaaatctaaagatgtaattttcagatactattattactattgaaaattcagagtctt
gtccctttttcttatatattgtaaacatatttttaccagacgaagaacatctaaaaccagtgtcgaatttactccagttttgaccgactctgactattac
gaaaacccataggctccatgaaacagcaggcccctgaggcatttcaccgaacaacttgtgggctatatcattgaaccggtttcgaccgtataactcagct
aaaccaattccagtatagctttgactgaaccggtttaatcgataagtttaaggtattcttttgtcacacagagtgagtttgaagaagaagaacgattcag
cttgagatggtgaggatgatgatacggagattgagttctcaagcttcgagatttgttcagcctcgtctcctggagacaggtactctgagaattgctttga
ttaattgcccaaatgagctacttttttgctgcgaacgcggcttctctactttcagCGATAGAAATCTCTCTTATAGAGACAAATTGAGCAGTGGGCTTGT
CGGTATTAAGGCAGATGATGCTGTTGATCTGTTCCGAGACATGATTCAGTCTCGTCCTCTTCCCACTGTTATAGATTTCAATAGATTGTTTAGTGCCATT
GCCAAAACGAAACAGTATGAGCTAGTGTTAGCTCTCTGCAAGCAAATGGAATCGAAGGGAATTGCACATAGCATCTACACTTTGAGTATTATGATCAATT
GTTTCTGTCGCTGTCGTAAACTTTCTTACGCTTTTTCTACTATGGGGAAGATCATGAAACTTGGGTATGAGCCTGATACAGTCATCTTTAACACTCTACT
CAATGGCTTATGTCTCGAGTGTAGAGTTTCTGAAGCTCTGGAATTAGTTGATCGAATGGTAGAAATGGGACATAAACCCACTCTCATAACGCTTAACACT
CTGGTCAATGGCCTTTGTCTCAACGGTAAAGTCTCTGATGCTGTGGTTTTGATTGATCGAATGGTTGAGACTGGCTTTCAACCCAATGAAGTAACTTATG
GACCGGTTTTAAATGTAATGTGTAAGTCCGGCCAAACTGCCCTTGCCATGGAGTTGCTCAGAAAGATGGAAGAAAGAAATATCAAGCTCGATGCAGTCAA
ATACAGTATCATCATTGATGGTCTTTGCAAAGATGGGAGCCTCGACAATGCATTCAACCTTTTCAATGAAATGGAAATCAAAGGGTTCAAAGCTGATATT
ATTACCTACAACACTCTCATTGGAGGCTTTTGTAATGCTGGTAGATGGGATGATGGTGCCAAGTTATTGAGGGATATGATCAAGAGGAAAATCAGCCCCA
ACGTTGTCACATTCAGTGTTTTGATTGATAGTTTTGTGAAAGAGGGAAAACTACGAGAGGCCGATCAACTGCTCAAGGAGATGATGCAACGAGGTATAGC
TCCTAATACTATTACATATAATTCCTTGATAGATGGGTTTTGCAAGGAGAACCGCCTAGAGGAGGCCATCCAGATGGTGGATCTGATGATTAGCAAGGGA
TGCGATCCTGATATCATGACGTTTAATATCCTCATAAATGGATATTGTAAGGCTAATCGGATTGACGATGGTTTGGAACTCTTCCGCGAAATGTCTCTGA
GAGGAGTGATTGCTAATACAGTTACTTATAACACTCTTGTCCAAGGGTTTTGTCAATCGGGAAAACTTGAGGTTGCCAAAAAACTCTTCCAAGAGATGGT
TTCTCGGCGTGTTCGTCCTGATATTGTGTCCTACAAAATATTGCTGGATGGGTTGTGTGACAATGGAGAACTAGAGAAAGCATTGGAAATATTTGGAAAA
ATAGAGAAGAGTAAGATGGAGCTTGATATTGGTATATATATGATCATTATCCATGGGATGTGCAATGCTAGTAAGGTGGATGATGCTTGGGATTTATTCT
GTAGCCTCCCTCTCAAAGGAGTGAAGCTTGATGCTAGGGCATACAACATAATGATTTCAGAATTATGTAGGAAAGACTCACTGTCTAAAGCAGACATACT
GTTCAGAAAAATGACAGAGGAAGGACATGCTCCAGATGAGTTGACATACAACATACTTATCAGGGCACATCTTGGTGATGATGATGCAACCACAGCAGCT
GAACTTATTGAAGAAATGAAGAGTAGTGGGTTCCCAGCAGATGTTTCCACTGTTAAGATGGTTATTAATATGCTTTCTAGTGGTGAATTGGACAAAAGCT
TTCTAGATATGCTTTCTACAACTCGGGCTTCATTGAAATGAatatttcttgtgtagctatgatttgttgcttttcaggcatcaacaaggtcaaatgggct
caatttttgtcctaaacacattgaatccattgaacaagcctttttattcagtgaaagaaaactaaaaattcaatcaaatcaactttccattttattcatc
gaagtaagagatcagttcgatacatgtggaatataaagcacaactatatcatcatatgtatgtatatttctttcttttagatttgagtaattagaaatgg
taactccaaacaaaagaagtaaattcaaagcttattctggtaaccccatggattattgtttgcccatttccactgatctctgcacatctcatccactcca
tattttgccctttaataaaccaaatcagattgtttaataacattatttatctcctaaaccaatcatgttaatggtgaaagagttaaacttacttccagcc

Border_1 (8388_LBD_directPCR)

ATTATATCTTCCCAAATTACCAATACATTACACTAGCATCTGAATTTCATAACCAATCTCGATACACCAAATCGAATTCAATTCGGCGTTAATTCAGTAC
ATTAAAAACGTCCGCAATGTGTTATTAAGTTGTCTAAGCGTCAATTTGTTAACACATTAAAAACGTCCACAATGTGTTATTAATTTACATGGAATCCAAA
TTAGACAGCAATAAGAACATACTATTCGCAGATACACCGACAAAGGCTGAAATAAAAAGACATCAACTTTGTTGATTTAGTAGACAAACTACTGATTTTC
TTAAATCTAGTAATACTAATATCGAATGAGATATATCTTAAAGGAATCAGATTTATAAAACGCCAAAAAATATTAAGAAACAAGCCGAGGAAAATTAATG
AGGCAATTCGTCGAACACCTGGCGGGCATGAAAAGCATCATCACCTAACAAGCCAATTTAGCAGCATGTGGCAGTTTACACAACAAAACCCCACTCTAGT
CCGGCCAAAAGCATTCTAATATATCAGGCCGAGACTCACAATTTCTAACTCAGGGTGAAACCAAAAAACTCTGAGGCAATCTAAATGGCTAACATACAGA
TATCAACACTAGAGATAAGATAGTGTCCGATTCCTAGGGATGTGAAAGATAGTAGCTTTCGCAATAGGAGAATAAGAAACTAAATGGTCGTATCAAAGCC
ATAGATGAGGAGAAATGAAAAAGAAAAGCACCTGATAATAGTCTCCATGAGGATTGAGGACGATACGAAGAGAACAACACTTCTATAGTTCTTCCAAAGT
CTCCAGTTCTGGATAAAAAGGTTAGGT

Start of BLAST Alignment:NT < 74 / Upstream
First 15 bp Perfect Match:NT < 74 / Upstream
BLAST Details:
Query Sequence: 8388_LBD_directPCR 
Length: (827 letters) 
Database: TIGR AGI BAC Sequences (DNA);
                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

T12C24 61405                                                  3190  6.4e-138  1
F19O5 68345                                                    707  9.5e-26   1
T12O21 67029                                                   337  1.2e-06   1
F14D7 51870                                                    294  0.00014   1


T12C24 61405
        Length = 106,142

  Plus Strand HSPs:

 Score = 223 (39.5 bits), Expect = 0.30, P = 0.26
 Identities = 189/326 (57%), Positives = 189/326 (57%), Strand = Plus / Plus

Query:    23 ATACATTACACTAGCAT-CTG-AAT-TTCAT-A-A-CCAATC-TC-G-ATACACCAAATC 73
             ||| |||  |   | || ||  ||| ||||| | | |||||  |  | |||  ||   | 
Sbjct: 43187 ATATATTTTAGGTGAATACTTTAATGTTCATTATAGCCAATTATATGTATATTCCGTGTA 43246

Query:    74 GAATTCAATTCGGCGTTAATTCAGTACATTAAAAACGTCCGCAATGTGTTATTAAGTTGT 133
               | | |||| | ||  | || | || | |||| |  |      ||  ||||||| || |
Sbjct: 43247 TTAGT-AATTTGCCGA-ACTT-ACTA-ACTAAACAATTTTTTTTTGGATTATTAACTT-T 43301

Query:   134 CTAAGCG-TCAATTTGTTAACACA-T-TAAAAACGTCCACAATGTGTTAT-TAATTTAC- 188
              ||||   |||| |  | ||||   | | ||||     | ||   ||||| | |   |  
Sbjct: 43302 ATAAGATATCAAATGATAAACAATCTGTCAAAAAAAA-ATAAAA-GTTATGTCAGCAATG 43359

Query:   189 ATGGAATCCAAATTAGACAGCAATAAGAACATACTATTCGCAG-ATACACCGACAAAGGC 247
             ||   || | |  |  | |  ||||| |||| | | | |  |  ||| ||   | ||   
Sbjct: 43360 ATAATATGCTACGTCAAAAAAAATAA-AACA-A-TGTGCAAATTATATACTTCCTAACTA 43416

Query:   248 TGAAATAAAAA-GACATCAACTTTGTTGATTTAGTAGACAAACTACTGAT--TTTCTTAA 304
                  |   || | || || |||||||||||||||||||||||||| ||   ||||||||
Sbjct: 43417 ATCCCTCCCAATGCCAACATCTTTGTTGATTTAGTAGACAAACTACGGAAAATTTCTTAA 43476

Query:   305 ATCTAGTAATACTAATATCGAATGAG 330
             |||   |  | | |  ||  | ||||
Sbjct: 43477 ATCATTTCTTTCAACAATTTA-TGAG 43501

  Minus Strand HSPs:

 Score = 3190 (484.7 bits), Expect = 6.4e-138, P = 6.4e-138
 Identities = 640/641 (99%), Positives = 640/641 (99%), Strand = Minus / Plus

Query:    827 ACCTAACCTTTTTATCCAGAACTGGAGACTTTGGAAGAACTATAGAAGTGTTGTTCTCTT 768
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 101516 ACCTAACCTTTTTATCCAGAACTGGAGACTTTGGAAGAACTATAGAAGTGTTGTTCTCTT 101575

Query:    767 CGTATCGTCCTCAATCCTCATGGAGACTATTATCAGGTGCTTTTCTTTTTCATTTCTCCT 708
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 101576 CGTATCGTCCTCAATCCTCATGGAGACTATTATCAGGTGCTTTTCTTTTTCATTTCTCCT 101635

Query:    707 CATCTATGGCTTTGATACGACCATTTAGTTTCTTATTCTCCTATTGCGAAAGCTACTATC 648
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 101636 CATCTATGGCTTTGATACGACCATTTAGTTTCTTATTCTCCTATTGCGAAAGCTACTATC 101695

Query:    647 TTTCACATCCCTAGGAATCGGACACTATCTTATCTCTAGTGTTGATATCTGTATGTTAGC 588
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 101696 TTTCACATCCCTAGGAATCGGACACTATCTTATCTCTAGTGTTGATATCTGTATGTTAGC 101755

Query:    587 CATTTAGATTGCCTCAGAGTTTTTTGGTTTCACCCTGAGTTAGAAATTGTGAGTCTCGGC 528
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 101756 CATTTAGATTGCCTCAGAGTTTTTTGGTTTCACCCTGAGTTAGAAATTGTGAGTCTCGGC 101815

Query:    527 CTGATATATTAGAATGCTTTTGGCCGGACTAGAGTGGGGTTTTGTTGTGTAAACTGCCAC 468
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 101816 CTGATATATTAGAATGCTTTTGGCCGGACTAGAGTGGGGTTTTGTTGTGTAAACTGCCAC 101875

Query:    467 ATGCTGCTAAATTGGCTTGTTAGGTGATGATGCTTTTCATGCCCGCCAGGTGTTCGACGA 408
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 101876 ATGCTGCTAAATTGGCTTGTTAGGTGATGATGCTTTTCATGCCCGCCAGGTGTTCGACGA 101935

Query:    407 ATTGCCTCATTAATTTTCCTCGGCTTGTTTCTTAATATTTTTTGGCGTTTTATAAATCTG 348
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 101936 ATTGCCTCATTAATTTTCCTCGGCTTGTTTCTTAATATTTTTTGGCGTTTTATAAATCTG 101995

Query:    347 ATTCCTTTAAGATATATCTCATTCGATATTAGTATTACTAGATTTAAGAAAATCAGTAGT 288
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 101996 ATTCCTTTAAGATATATCTCATTCGATATTAGTATTACTAGATTTAAGAAAATCAGTAGT 102055

Query:    287 TTGTCTACTAAATCAACAAAGTTGATGTCTTTTTATTTCAGCCTTTGTCGGTGTATCTGC 228
              ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 102056 TTGTCTACTAAATCAACAAAGTTGATGTCTTTTTATTTCAGCCTT-GTCGGTGTATCTGC 102114

Query:    227 GAATAGTATGTTCTTATTGCTGTCTAATTTGGATTCCATGT 187
              |||||||||||||||||||||||||||||||||||||||||
Sbjct: 102115 GAATAGTATGTTCTTATTGCTGTCTAATTTGGATTCCATGT 102155


F19O5 68345
        Length = 116,597

  Minus Strand HSPs:

 Score = 707 (112.1 bits), Expect = 9.5e-26, P = 9.5e-26
 Identities = 271/397 (68%), Positives = 271/397 (68%), Strand = Minus / Plus

Border_2 (8388_RBU)

CGCGCAATTAACCCTCACTAAAGGGAACAAAAGCTGGAGCTCGCTTGAGCTTGGATCAGATTGTCGTTTCCCGCCTTCAGTTTAAACTATCAGTGTTTGA
GCAAACGCTGTGATAAAGAGGCTTTCTTTCTTGCTAGCAAGTACACACGAGTGACATGGCGGCATCAACTTCAACCCGATTCCTTGTTCTGCTCAAAGAT
TTTTCTGCCTTCAGAAAGATATCATGGACTTGTGCTGCAACTAATTTTCACCGCCAATCTCGTTTTTTATGCCATGTTGCGAAAGAAGACGGGTCTCTTA
CTCTTGCAAGCCTTGATTTGGGGAACAAACCACGGAAATTTGGGAAGGGTAAGGCGATGAAGCTTGAGGGAAGTTTTGTTACTGAAATGGGTCAAGGTAA
GGTAAGAGCGGTAAAGAACGATAAAATGAAAGTTGTCAAGGAAAAAAAGCCAGCTGAGATAGTGTCTCCTTTGTTTTCTGCAAAATCCTTTGAGGAGCTT
GGCCTCCCGGATTCCTTGTTAGACAGTTTGGAAAGAGAAGGTTTCTCTGTCCCAACAGATGTCCAATCAGCAGCTGTCCCGGCAATAATCAAAGGTCACG
ATGCAGTGATTCAGTCTTACACAGGATCTGGCAAAACATTAGCTTATCTGCTTCCAATATTGTCCGAAATTGGTCCTCTAGCAGAAAAATCTAGAAGTTC
GCACAGTGAAAATGATAAGAGGACTGAGATTCAGGCAATGATCGTGGCTCCATCAAGAGAACTCGGTATGCAGATAGTAAGAGAGGTAGAGAAACTGCTC
GGACCTGTTCACCGTAGAATGGTTCAGCAGTTGGTAGGAGGTGCAAACCGAATGAGGCAAGAAGAGGCCCTTAAGAAAAATAAACCTGCAATTGTTGTTG
GCACTCCCGGGAGAATTGCAGAGATAAGCAAAGGTGGAAAATTGCACACTCATGGGTGTAGATTCTTGGTGCTAGACGAAGTCGATGAGCTTTTATCGTT
TAATTTCCGAGAAGATATCCATCGAATACTAGAACATGTAGGAAAGAGATCTGGGGCTGGTCCTAAAGGAGAAGTCGATGAACGGGCTAACCGGCAGACC
ATTCTAGTCTCTGCAACTGTGCCATTCTCGGTTATCCGAGCAGCTAAAAGCTGGAGTCACGAGCCGGTTCTTGTCCAAGCCAACAAAGTCACTCCTCTTG
ATACCGTTCAACCATCTGCACCGGTAATGAGCTTGACTCCCACAACTTCTGAAGCTGATGGCCAGATTCAGACTACTATTCAGAGCTTACCTCCAGCTTT
AAAACACTATTACTGCATCTCAAAGCATCAACACAAAGTCGACACGTTAAGGAGATGCGTTCACGCCCTCGATGCCCAATCGGTTATAGCTTTCATGAAC
CACTCAAGGCAGCTCAAAGATGTGGTCTACAAACTCGAAGCTCGTGGTATGAATTCAGCTGAGATGCACGGAGATCTCGGGAAGCTAGGGAGATCAACAG
TTCTAAAGAAGTTCAAGAACGGGGAAATCAAGGTACTTGTGACAAACGAGCTCTCTGCCCGGGGTCTGGATGTTGCGGAATGTGATCTGGTGGTGAATCT
TGAGCTTCCAACTGATGCGGTTCACTATGCTCATCGAGCTGGGAGAACAGGGAGGCTGGGAAGGAAAGGGACGGTGGTAACAGTGTGCGAGGAATCACAA
GTGTTTATAGTGAAGAAGATGGAGAAGCAGCTTGGTTTGCCTTTCTTGTATTGTGAGTTTGTTGATGGAGAGCTTGTTGTCACTGAGGAAGATAAAGCTA
TTATAAGGTGAAAATCTAAAGATGTAATTTTCAGATACTATTATTACTATTGAAAATTCAGAGTCTTGTCCCTTTTTCTTATATATTGTAAACATATTTT
TACCAGACGAAGAACATCTAAAACCAGTGTCGAATTTACTCCAGTTTTGACCGACTCTGACTATTACGAAAACCCATAGGCTCCATGAAACAGCAGGCCC
CTGAGGCATTTCACCGAACAACTTGTGGGCTATATCATTGAACCGGTTTCGACCGTATAACTCAGCTAAACCAATTCCAGTATAGCTTTGACTGAACCGG
TTTAATCGATAAGTTTAAGGTATTCTTTTGTCACACAGAGTGAGTTTGAAGAAGAAGAACGATTCAGCTTGAGATGGTGAGGATGATGATACGGAGATTG
AGTTCTCAAGCTTCGAGATTTGTTCAGCCTCGTCTCCTGGAGACAGGTACTCTGAGAATTGCTTTGATTAATTGCCCAAATGAGCTACTTTTTTGCTGCG
AACGCGGCTTCTCTACTTTCAGCGATAGAAATCTCTCTTATAGAGACAAATTGAGCAGTGGGCTTGTCGGTATTAANGCAGATGATGCTGTTGATCTGTT
CCGAGACATGATTCAGTCTCGTCCTCTTNCCACTGGTATAGATTCAATAGATGGTTAAGGGCCTTGCCAAAACGAAACAGTATGAGCTAGTGGTAGCTCT


Start of BLAST Alignment:NT < 64 / Upstream
First 15 bp Perfect Match:NT < 60 / Upstream
BLAST Details:
Query Sequence: 8388_RBU 
Length: (2500 letters) 
Database: TIGR AGI BAC Sequences (DNA);
                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

T12C24 61405                                                 11947  0.        1
F13K23 51904                                                  5171  2.0e-227  1
F5O11 60116                                                   1545  2.4e-71   2
F16J14 60569                                                   494  6.4e-13   1

T12C24 61405
        Length = 106,142

  Plus Strand HSPs:

 Score = 11947 (1798.6 bits), Expect = 0., P = 0.
 Identities = 2401/2412 (99%), Positives = 2401/2412 (99%), Strand = Plus / Plus

Query:     91 CAGTGTTTGAGCAAACGCTGTGATAAAGAGGCTTTCTTTCTTGCTAGCAAGTACACACGA 150
              | || |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 102166 CTGT-TTTGAGCAAACGCTGTGATAAAGAGGCTTTCTTTCTTGCTAGCAAGTACACACGA 102224

Query:    151 GTGACATGGCGGCATCAACTTCAACCCGATTCCTTGTTCTGCTCAAAGATTTTTCTGCCT 210
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 102225 GTGACATGGCGGCATCAACTTCAACCCGATTCCTTGTTCTGCTCAAAGATTTTTCTGCCT 102284

Query:    211 TCAGAAAGATATCATGGACTTGTGCTGCAACTAATTTTCACCGCCAATCTCGTTTTTTAT 270
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 102285 TCAGAAAGATATCATGGACTTGTGCTGCAACTAATTTTCACCGCCAATCTCGTTTTTTAT 102344

Query:    271 GCCATGTTGCGAAAGAAGACGGGTCTCTTACTCTTGCAAGCCTTGATTTGGGGAACAAAC 330
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 102345 GCCATGTTGCGAAAGAAGACGGGTCTCTTACTCTTGCAAGCCTTGATTTGGGGAACAAAC 102404

Query:    331 CACGGAAATTTGGGAAGGGTAAGGCGATGAAGCTTGAGGGAAGTTTTGTTACTGAAATGG 390
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 102405 CACGGAAATTTGGGAAGGGTAAGGCGATGAAGCTTGAGGGAAGTTTTGTTACTGAAATGG 102464

Query:    391 GTCAAGGTAAGGTAAGAGCGGTAAAGAACGATAAAATGAAAGTTGTCAAGGAAAAAAAGC 450
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 102465 GTCAAGGTAAGGTAAGAGCGGTAAAGAACGATAAAATGAAAGTTGTCAAGGAAAAAAAGC 102524

Query:    451 CAGCTGAGATAGTGTCTCCTTTGTTTTCTGCAAAATCCTTTGAGGAGCTTGGCCTCCCGG 510
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 102525 CAGCTGAGATAGTGTCTCCTTTGTTTTCTGCAAAATCCTTTGAGGAGCTTGGCCTCCCGG 102584

Query:    511 ATTCCTTGTTAGACAGTTTGGAAAGAGAAGGTTTCTCTGTCCCAACAGATGTCCAATCAG 570
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 102585 ATTCCTTGTTAGACAGTTTGGAAAGAGAAGGTTTCTCTGTCCCAACAGATGTCCAATCAG 102644

Query:    571 CAGCTGTCCCGGCAATAATCAAAGGTCACGATGCAGTGATTCAGTCTTACACAGGATCTG 630
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 102645 CAGCTGTCCCGGCAATAATCAAAGGTCACGATGCAGTGATTCAGTCTTACACAGGATCTG 102704

Query:    631 GCAAAACATTAGCTTATCTGCTTCCAATATTGTCCGAAATTGGTCCTCTAGCAGAAAAAT 690
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 102705 GCAAAACATTAGCTTATCTGCTTCCAATATTGTCCGAAATTGGTCCTCTAGCAGAAAAAT 102764

Query:    691 CTAGAAGTTCGCACAGTGAAAATGATAAGAGGACTGAGATTCAGGCAATGATCGTGGCTC 750
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 102765 CTAGAAGTTCGCACAGTGAAAATGATAAGAGGACTGAGATTCAGGCAATGATCGTGGCTC 102824

Query:    751 CATCAAGAGAACTCGGTATGCAGATAGTAAGAGAGGTAGAGAAACTGCTCGGACCTGTTC 810
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 102825 CATCAAGAGAACTCGGTATGCAGATAGTAAGAGAGGTAGAGAAACTGCTCGGACCTGTTC 102884

Query:    811 ACCGTAGAATGGTTCAGCAGTTGGTAGGAGGTGCAAACCGAATGAGGCAAGAAGAGGCCC 870
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 102885 ACCGTAGAATGGTTCAGCAGTTGGTAGGAGGTGCAAACCGAATGAGGCAAGAAGAGGCCC 102944

Query:    871 TTAAGAAAAATAAACCTGCAATTGTTGTTGGCACTCCCGGGAGAATTGCAGAGATAAGCA 930
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 102945 TTAAGAAAAATAAACCTGCAATTGTTGTTGGCACTCCCGGGAGAATTGCAGAGATAAGCA 103004

Query:    931 AAGGTGGAAAATTGCACACTCATGGGTGTAGATTCTTGGTGCTAGACGAAGTCGATGAGC 990
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 103005 AAGGTGGAAAATTGCACACTCATGGGTGTAGATTCTTGGTGCTAGACGAAGTCGATGAGC 103064

Query:    991 TTTTATCGTTTAATTTCCGAGAAGATATCCATCGAATACTAGAACATGTAGGAAAGAGAT 1050
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 103065 TTTTATCGTTTAATTTCCGAGAAGATATCCATCGAATACTAGAACATGTAGGAAAGAGAT 103124

Query:   1051 CTGGGGCTGGTCCTAAAGGAGAAGTCGATGAACGGGCTAACCGGCAGACCATTCTAGTCT 1110
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 103125 CTGGGGCTGGTCCTAAAGGAGAAGTCGATGAACGGGCTAACCGGCAGACCATTCTAGTCT 103184

Query:   1111 CTGCAACTGTGCCATTCTCGGTTATCCGAGCAGCTAAAAGCTGGAGTCACGAGCCGGTTC 1170
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 103185 CTGCAACTGTGCCATTCTCGGTTATCCGAGCAGCTAAAAGCTGGAGTCACGAGCCGGTTC 103244

Query:   1171 TTGTCCAAGCCAACAAAGTCACTCCTCTTGATACCGTTCAACCATCTGCACCGGTAATGA 1230
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 103245 TTGTCCAAGCCAACAAAGTCACTCCTCTTGATACCGTTCAACCATCTGCACCGGTAATGA 103304

Query:   1231 GCTTGACTCCCACAACTTCTGAAGCTGATGGCCAGATTCAGACTACTATTCAGAGCTTAC 1290
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 103305 GCTTGACTCCCACAACTTCTGAAGCTGATGGCCAGATTCAGACTACTATTCAGAGCTTAC 103364

Query:   1291 CTCCAGCTTTAAAACACTATTACTGCATCTCAAAGCATCAACACAAAGTCGACACGTTAA 1350
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 103365 CTCCAGCTTTAAAACACTATTACTGCATCTCAAAGCATCAACACAAAGTCGACACGTTAA 103424

Query:   1351 GGAGATGCGTTCACGCCCTCGATGCCCAATCGGTTATAGCTTTCATGAACCACTCAAGGC 1410
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 103425 GGAGATGCGTTCACGCCCTCGATGCCCAATCGGTTATAGCTTTCATGAACCACTCAAGGC 103484

Query:   1411 AGCTCAAAGATGTGGTCTACAAACTCGAAGCTCGTGGTATGAATTCAGCTGAGATGCACG 1470
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 103485 AGCTCAAAGATGTGGTCTACAAACTCGAAGCTCGTGGTATGAATTCAGCTGAGATGCACG 103544

Query:   1471 GAGATCTCGGGAAGCTAGGGAGATCAACAGTTCTAAAGAAGTTCAAGAACGGGGAAATCA 1530
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 103545 GAGATCTCGGGAAGCTAGGGAGATCAACAGTTCTAAAGAAGTTCAAGAACGGGGAAATCA 103604

Query:   1531 AGGTACTTGTGACAAACGAGCTCTCTGCCCGGGGTCTGGATGTTGCGGAATGTGATCTGG 1590
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 103605 AGGTACTTGTGACAAACGAGCTCTCTGCCCGGGGTCTGGATGTTGCGGAATGTGATCTGG 103664

Query:   1591 TGGTGAATCTTGAGCTTCCAACTGATGCGGTTCACTATGCTCATCGAGCTGGGAGAACAG 1650
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 103665 TGGTGAATCTTGAGCTTCCAACTGATGCGGTTCACTATGCTCATCGAGCTGGGAGAACAG 103724

Query:   1651 GGAGGCTGGGAAGGAAAGGGACGGTGGTAACAGTGTGCGAGGAATCACAAGTGTTTATAG 1710
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 103725 GGAGGCTGGGAAGGAAAGGGACGGTGGTAACAGTGTGCGAGGAATCACAAGTGTTTATAG 103784

Query:   1711 TGAAGAAGATGGAGAAGCAGCTTGGTTTGCCTTTCTTGTATTGTGAGTTTGTTGATGGAG 1770
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 103785 TGAAGAAGATGGAGAAGCAGCTTGGTTTGCCTTTCTTGTATTGTGAGTTTGTTGATGGAG 103844

Query:   1771 AGCTTGTTGTCACTGAGGAAGATAAAGCTATTATAAGGTGAAAATCTAAAGATGTAATTT 1830
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 103845 AGCTTGTTGTCACTGAGGAAGATAAAGCTATTATAAGGTGAAAATCTAAAGATGTAATTT 103904

Query:   1831 TCAGATACTATTATTACTATTGAAAATTCAGAGTCTTGTCCCTTTTTCTTATATATTGTA 1890
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 103905 TCAGATACTATTATTACTATTGAAAATTCAGAGTCTTGTCCCTTTTTCTTATATATTGTA 103964

Query:   1891 AACATATTTTTACCAGACGAAGAACATCTAAAACCAGTGTCGAATTTACTCCAGTTTTGA 1950
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 103965 AACATATTTTTACCAGACGAAGAACATCTAAAACCAGTGTCGAATTTACTCCAGTTTTGA 104024

Query:   1951 CCGACTCTGACTATTACGAAAACCCATAGGCTCCATGAAACAGCAGGCCCCTGAGGCATT 2010
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 104025 CCGACTCTGACTATTACGAAAACCCATAGGCTCCATGAAACAGCAGGCCCCTGAGGCATT 104084

Query:   2011 TCACCGAACAACTTGTGGGCTATATCATTGAACCGGTTTCGACCGTATAACTCAGCTAAA 2070
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 104085 TCACCGAACAACTTGTGGGCTATATCATTGAACCGGTTTCGACCGTATAACTCAGCTAAA 104144

Query:   2071 CCAATTCCAGTATAGCTTTGACTGAACCGGTTTAATCGATAAGTTTAAGGTATTCTTTTG 2130
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 104145 CCAATTCCAGTATAGCTTTGACTGAACCGGTTTAATCGATAAGTTTAAGGTATTCTTTTG 104204

Query:   2131 TCACACAGAGTGAGTTTGAAGAAGAAGAACGATTCAGCTTGAGATGGTGAGGATGATGAT 2190
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 104205 TCACACAGAGTGAGTTTGAAGAAGAAGAACGATTCAGCTTGAGATGGTGAGGATGATGAT 104264

Query:   2191 ACGGAGATTGAGTTCTCAAGCTTCGAGATTTGTTCAGCCTCGTCTCCTGGAGACAGGTAC 2250
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 104265 ACGGAGATTGAGTTCTCAAGCTTCGAGATTTGTTCAGCCTCGTCTCCTGGAGACAGGTAC 104324

Query:   2251 TCTGAGAATTGCTTTGATTAATTGCCCAAATGAGCTACTTTTTTGCTGCGAACGCGGCTT 2310
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 104325 TCTGAGAATTGCTTTGATTAATTGCCCAAATGAGCTACTTTTTTGCTGCGAACGCGGCTT 104384

Query:   2311 CTCTACTTTCAGCGATAGAAATCTCTCTTATAGAGACAAATTGAGCAGTGGGCTTGTCGG 2370
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 104385 CTCTACTTTCAGCGATAGAAATCTCTCTTATAGAGACAAATTGAGCAGTGGGCTTGTCGG 104444

Query:   2371 TATTAANGCAGATGATGCTGTTGATCTGTTCCGAGACATGATTCAGTCTCGTCCTCTTNC 2430
              |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 104445 TATTAAGGCAGATGATGCTGTTGATCTGTTCCGAGACATGATTCAGTCTCGTCCTCTTCC 104504

Query:   2431 CACTGGTATAGATT-CAATAGATGGTTAAGGGCC-TTGCCAAAACGAAACAGTATGAGCT 2488
              ||||| |||||||| |||||||| ||| || ||| |||||||||||||||||||||||||
Sbjct: 104505 CACTGTTATAGATTTCAATAGATTGTTTAGTGCCATTGCCAAAACGAAACAGTATGAGCT 104564

Query:   2489 AGTGGTAGCTCT 2500
              |||| |||||||
Sbjct: 104565 AGTGTTAGCTCT 104576

  Minus Strand HSPs:

 Score = 1376 (212.5 bits), Expect = 9.5e-55, Sum P(2) = 9.5e-55
 Identities = 396/520 (76%), Positives = 396/520 (76%), Strand = Minus / Plus

Query:  1939 GTAAATTCGACACTGGTTTTAGATGTTCTTCGTCTGGTAAAAATATGTTTACAATATATA 1880
             |||||||  ||||| ||| |   | ||  | || | ||  |  ||   |||  || | | 
Sbjct: 73842 GTAAATTTAACACTCGTTATTT-TCTTAGT-GTATAGTCCAG-TACAATTAGTATGTTTC 73898

Query:  1879 AGAAAAAGGGACAAGACTCTGAATTTTCAA-TAGT-AAT--AATAGTATCTGAAAATTAC 1824
                  |   || || |   | |||    || |  | |||  ||| |  | | ||||  | 
Sbjct: 73899 GTTGTATTAGA-AATAAA-TAAATAAGAAAGTTCTGAATTTAATTGGTTATAAAAAG-A- 73954

Query:  1823 ATCTTTAGATTTTCACCTTATAATAGCTTTATCTTCCTCAGTGACAACAAGCTCTCCATC 1764
             ||||  | | |   |  | | ||||||| |||||||  ||| ||||||||| | ||||||
Sbjct: 73955 ATCTGCAAACTAG-AG-TAA-AATAGCTATATCTTCTGCAG-GACAACAAGTTTTCCATC 74010

Query:  1763 AACAAACTCACAATACAAGAAAGGCAAACCAAGCTGCTTCTCCATCTTCTTCACTATAAA 1704
             || ||| ||||||||||||||||||| |||| | ||||||||||||||||||||||||| 
Sbjct: 74011 AATAAAGTCACAATACAAGAAAGGCAGACCATGTTGCTTCTCCATCTTCTTCACTATAA- 74069

Query:  1703 CACTTGTGATTCCTCGCACACTGTTACCACCGTCCCTTTCCTTCCCAGCCTCCCTGTTCT 1644
             |||||||||||| || |||||||| |||||||||  |||||||||| |||| |   ||||
Sbjct: 74070 CACTTGTGATTCTTCACACACTGTAACCACCGTCATTTTCCTTCCCGGCCTTCTCATTCT 74129

Query:  1643 CCCAGCTCGATGAGCATAGTGAACCGCATCAGTTGGAAGCTCAAGATTCACCACCAGATC 1584
              ||||||||||||||||||||||| ||||| ||||||||||||||||  ||||  |||||
Sbjct: 74130 TCCAGCTCGATGAGCATAGTGAACAGCATCTGTTGGAAGCTCAAGATCGACCATGAGATC 74189

Query:  1583 ACATTCCGCAACATCCAGACCCCGGG-CAGAGAGCTCGTTTGTCACAAGTACCTTGATTT 1525
             |||||||||| | |||| |||||  | || |||||||||| |||||||||||| | |  |
Sbjct: 74190 ACATTCCGCATCTTCCAAACCCCAAGTCA-AGAGCTCGTTAGTCACAAGTACCCTAACAT 74248

Query:  1524 CCCCGTTCTTGAACTTCTTTAGAACTGTTGATCTCCCTAGCTTCCCGAGATCTCCGTGCA 1465
             ||| ||||||||||||||||||||| | |||||||| |||||||| ||||||||  | ||
Sbjct: 74249 CCCTGTTCTTGAACTTCTTTAGAACCGATGATCTCCTTAGCTTCCTGAGATCTCTATTCA 74308

Query:  1464 TCTCAGCTGAATTCATACCACGAGCTTCGAGTTTGTAGAC 1425
               || || |||||||||||||||||||||| | ||| |||
Sbjct: 74309 GTTCTGCGGAATTCATACCACGAGCTTCGATTGTGTTGAC 74348

 Score = 786 (124.0 bits), Expect = 2.9e-26, P = 2.9e-26
 Identities = 262/373 (70%), Positives = 262/373 (70%), Strand = Minus / Plus

Query:  2500 AGAGCTACCACTAGCTCATACTGTTTCGTTTTGGCAA-GGCCCTTAACCATCTATTGAA- 2443
             | | ||| ||| || |   ||||||| ||| |||||| ||| || ||  ||||| |||| 
Sbjct: 76241 AAATCTAACACGAGATTGAACTGTTTTGTTCTGGCAATGGCACTAAAGAATCTACTGAAA 76300

Query:  2442 TCTATACCAGTGGNAAGAGGACGAGACTGAATCATGTCTCGGAACAGATCAACAGCATCA 2383
             || | |  | | | |||||||||||||  |||||| ||| |||||||| ||| |||||||
Sbjct: 76301 TCAACAAGACTAGGAAGAGGACGAGACCTAATCATTTCTTGGAACAGAGCAATAGCATCA 76360

Query:  2382 TCTGCNTTAATACCGACAAGCCCACTGCTCAATTTGTCTCTATAAGAGAGATTTCTATCG 2323
             |||   |||||| | ||||  ||||| |||||| | |||||  || ||| ||| | || |
Sbjct: 76361 TCTTTCTTAATATCAACAATACCACTTCTCAATCTCTCTCTGAAACAGACATTCCCATTG 76420

Query:  2322 CTGAAAGTAGAGAAGCCGCGTTCGCAGCAA-AAAAGTAGCTC-ATTTGGGCAATTAATCA 2265
             || | | | || ||| | |||||||||| | ||||| | ||| |  |||   |   | ||
Sbjct: 76421 CTAATACTTGAAAAGTCTCGTTCGCAGCTAGAAAAGAAACTCGAAATGGTACAG--AGCA 76478

Query:  2264 AAGCAATTCTCAGAGTACCTGTCTCCAGGAGACGAGGCTGAACAAATCTCGAAGC-TTGA 2206
             || || |||| ||| ||||||||| || |||| |||||||||  |||||| |||| || |
Sbjct: 76479 AATCAGTTCTAAGACTACCTGTCTTCAAGAGATGAGGCTGAATCAATCTCAAAGCCTTCA 76538

Query:  2205 GAACTCAA-TCTCCG-TATCATCATCCTCACCATCTCA--AGCTGAATCGTTC-TTCTT- 2152
              |  |  | |   || | || | ||| |||  || ||   |||||| | |||  || || 
Sbjct: 76539 TATTTGTAGTAATCGATCTCTTTATCATCATTATTTCTTCAGCTGAGTTGTTTGTTTTTG 76598

Query:  2151 CT-TCAAACTCAC 2140
             || |  |||  ||
Sbjct: 76599 CTCTGTAACCTAC 76611

 Score = 545 (87.8 bits), Expect = 3.1e-15, P = 3.1e-15
 Identities = 213/314 (67%), Positives = 213/314 (67%), Strand = Minus / Plus

Query:  2500 AGAGCTACCACTAGCTCATACTGTTTCGTTTTGGCAAGGCC-CTTAACCATCTATTGAA- 2443
             ||| ||| |||||| ||||| || || ||| ||||||   | || ||| ||||| |||| 
Sbjct: 46810 AGATCTAACACTAGATCATATTGCTTTGTTCTGGCAACAACACTAAACAATCTACTGAAA 46869

Query:  2442 TCTATACCAGTGGNAAGAGGACGAGACTGAATCATGTCTCGGAACAGATCAACAGCATCA 2383
             || |||  |   | | |||||||||||  | |||| ||| | ||||||||||||||||||
Sbjct: 46870 TCAATAAGACGAGGACGAGGACGAGACCTAGTCATTTCTTGAAACAGATCAACAGCATCA 46929

Query:  2382 TCTGCNTTAATACCGACAAGCCCACTGCTCAATTTGTCTCTATAAGAGAGATTTC-T--- 2327
             ||| | || ||| | |||| |||||| |||||| | |||||||| ||||  || | |   
Sbjct: 46930 TCTTCCTTGATATCAACAATCCCACTTCTCAATCTCTCTCTATAGGAGACTTTCCCTTTC 46989

Query:  2326 --ATCGCTGAAAGTAGAGAAGCCGCGTTCGCAGCAAAAAAGTAGCTCATTTGGGCAATTA 2269
               ||| |||| | |||| ||| | ||| |  ||||| | |  ||   ||   | || || 
Sbjct: 46990 CCATCACTGACACTAGAAAAGACTCGTCCATAGCAAGACA--AGA--ATAAAG-CAGTTC 47044

Query:  2268 ATCAAAGCAA-T-TCTC-AGAGTACCTGTCTCCAGGAGACGAGGC-TGAA-CAAATCTCG 2214
              | | || |  | |||| |||  || |||||  |  |  |   || |||  ||| |   |
Sbjct: 47045 TT-AGAGTACCTGTCTCGAGAAGACGTGTCTGAATCAATCCCCGCATGACTCAAGTTAAG 47103

Query:  2213 AAGCTTGAGAACTC 2200
             ||  |||| | |||
Sbjct: 47104 AAT-TTGAAAGCTC 47116

 Score = 141 (27.2 bits), Expect = 9.5e-55, Sum P(2) = 9.5e-55
 Identities = 51/72 (70%), Positives = 51/72 (70%), Strand = Minus / Plus

Query:  1366 GCGTGAACGCATCTCCTTAACGTGTCGACTTTGTGTTGATGCTTTGAGATGCAGTAATAG 1307
             ||| |||  |||  |   | | | ||||  ||||||||| | || |||||| ||||||||
Sbjct: 74314 GCG-GAATTCATACCACGAGC-T-TCGA--TTGTGTTGACGTTTAGAGATGTAGTAATAG 74368

Query:  1306 TGTTTTAAAGCT 1295
             ||||  |  |||
Sbjct: 74369 TGTTGCAGGGCT 74380


F13K23 51904
        Length = 74,328

  Plus Strand HSPs:

 Score = 5171 (781.9 bits), Expect = 2.0e-227, P = 2.0e-227
 Identities = 1043/1052 (99%), Positives = 1043/1052 (99%), Strand = Plus / Plus