At3g12670 SYNGENTA 94848
Genomic Sequence (from TAIR)
gtctggagcagaaaaataaatttaccatggttttgaaatttaccgtttcagtccctttttattttattttcttactcaagcccaatgttgatgtattatt ttgagattaaaaaacttttgaccaaataaaaaaactattttgatttgctttcaatttgggtttaaataagagtgagggtctcgc►ag►gttagcttataa gccgccgccttgaaaatccagaaggccatttttgttggtgaaaggtagaattcgtaaatttcttctgctcactttattgtttcgactcatacccgataat ctcttctatgtttggtagagatatcttctcaaagtcttatctttccttaccgtgttctgtgttttttgatgatttaggtgaagaagaagaagcagagaca aaaacgattATGAAGTACGTTTTGGTGACAGGAGGAGTGGTGAGTGGTCTTGGCAAAGGTGTCACTGCTAGTAGCATTGGACTTCTCCTTCAAGCATGTG GTCTTCGTGTCACTTCCATTAAAATTGgtgagattcttgtctatctggattgcatgcaacactctgtattattggtcacccgccaaaaaaagtcaccttt tattgtgtaacggcttgtattgtgaagccaatttaagtgaatttcgtagctatgagatccttttttcacatttacattccttgtatgtagATCCTTATCT TAACACTGATGCTGGAACAATGTCTCCGTTTGAGCATGGAGAAGTATTTGTATTGGATGATGGTGGAGAGgtatgtcatattgtgatttttgatgtattt tctaatcatctcaggtattgttcctcaaacttgatgcattgtgacccctttcagGTGGATTTGGACCTTGGAAACTATGAACGATTTTTAGACAGTACAT TGACCCGTGACAACAATATAACTACTGGAAAGATATACCAGgtatttgtactacctcctcaatagttatctcttgttagagccaggttacaaatttgtgt accctcaattttgcagTCAGTTATTGACAAGGAAAGGAAGGGGGACTACCTCGGAAGAACTGTACAGgttcatacattacttgtgctcttacttaacttc ctctggttctaatttgattcagtgtttgaacaaagtttttaactttatttaagGTTGTTCCTCATGTTACTGACGCAATCCAAGAGTGGATTGAGCGTGT AGCTAATGTTCCTGTGGATGGAAAGGAAGGTCCTCCTGATGTTTGTGTCATCGAATTAGGCGGGACTATAGgtactgtttgttggattatattacatttc ctgacaattgttcagaagagtgagttttattattctattttctgtacagGTGATATTGAATCTATGCCCTTTATTGAGGCCCTTGGTCAATTCTCGTATA AAGTTGgtgagcggtgctctaatttatattaacttttgaagattcagtaattttcttaggctattgcttatcggcttcatcaccgcatctgtcttttgtt cttagGACCTGGTAATTTCTGCTTGGTTCATGTCAGCCTTGTGCCTGTTCTCAGTGTTGTTGGTGAACAGgtaatcgtctatatagttgatatcttccat tgagattctattttattagtttgtaacgacggagatatgagcctatattgcagAAGACGAAGCCAACCCAGCATAGTGTGCGAGGCCTCAGGAGCCTTGG TTTGACACCAAATATCCTAGCATGTCGCAGCACGAAGgtaatgggcgctccaatattgtcatgtcctttaagtgttgatgttagctatggtttttggttt ttaatcttatcagttcttgttttgtaacagGCACTTGAAGAAAATGTCAAGACAAAACTATCTCAATTTTGCCATGTGCCGgtatatcttgttaaatttt tggttcttatttgcgcttcttagcctaggaaggtcagatttctcatcaaaagacccctgtccgagtaaacatttctgtctgctttcctatggtttcccag GAAGTGAATATAGTAACGCTCTATGATGTTCCAAATATTTGGCACGTTCCTCTGCTTTTAAGGgtaagtacatttcagttgaatagtttcttactaaaat ctaatgagcttgttcctatgctggattttttctcttatcattcttttggtgttaacttctcttcaatagGATCAAAAAGCTCATGAAGCGATCCTAAGAG AGTTAAATCTTAGgtttgtttctgaaccatcttttcttttttctctctcttgagtgtaagttttattttgctcttggctccacactataagattgtctgt gatggctttttctctagtcgtttgacatttgcttattctgcagTAATGCTATAAAGCCTGACTTGACAGAATGGACTGCAAGGACTAAAATTTATGACAC ACTGCAAGACCCTgttagtcagctttttctaattatgtttttgatgccattgtgtctatataatcaaaaccattgttcattctcgatggtgtgttctctt tcagGTGAGAATAGCTATGGTTGGAAAGTACACTGGCCTTACTGATTCTTACCTTTCCGTGTTGAAGgtaattgtttttctgtgttcttaaacaaaccaa atgttgcattttataatcccaacctttagtttataattgatttccttacaacaaccgtgtctaatattgacgattcttaaaaatgggatttgtgttcact gcagGCCCTTTTGCATGCTTCTGTTGCATGTCACAAGAAGCTTGTCATAGAGTGGGTTGCAGCTAGTGACCTTGAAGAGATAACTGCACAAGAGgtgagc ctggcactctggtttttgtttctctcagggtacgaaaaaatgtatttactctcatgagcttttgtatgacgtacccttgcagACGCCAGATGTCCATAAG GCTGCATGGGATCTTTTGAAGgtacgtgaattttaatggagcctggcacaccaatttggtaaatatgtttgactcaacacttcggttgttgcagGGTGCT GATGGTATCCTAGTACCAGGAGGGTTTGGTGATAGAGGAGTGCAAGGGAAGATACTTGCTACAAAGTACGCCCGTGAAAATCAAGTCCCTTTCCTTGGCA TATGCCTGGGAATGCAGCTGGCTGTTGTTGAATTTGCCCGCTCCATTCTTGGTTTTCACGATGCAAACAGCACAGAGTTTGAACCAGAAACTTCAAGCCC TTGCATCATATTTATGCCAGAAgtactaaacaatctggctctctcatttgattgattacatggttttcatgtattaagtatctacttatacttgttcaat ctctcaatagGGATCCACAACTCATATGGGGGGCACAATGCGCTTAGGGTCAAGGAAGACTTACTTCCAGGTTGCTGATTGCAAGTCTGCCAAGCTgtaa gcacataatacagtagcacatgataactcgtaggattcatttccaaaatctatataacttctaatctctacattcagGTACGGTAATGCAAAGTTTGTAG ATGAGCGACACAGGCACAGATATGAGgtaatatttcagcttcttctattatacatgttattttccttgagatttcttgtgagttgttgacagtgaaatat atatttttggcagGTAAATCCAGATATGATATCAGAAATTGAGAAGGCTGGCCTCTCCTTTGTTGGGAAAGATGAGACTGGGCGTCGTATGGAGgtaata tgcttgtggaaaacatgtttaatgtgtgactctgtctgggattggaacaataattgaatgcttttgtgatgttatgcttcattattctactggtttggtg tgcagATTGTTGAACTACCAAGTCATCCATACTTTGTGGGTGCTCAGTTCCATCCTGAATTCAAGTCCAGACCTGGGAAACCTTCTGCATTGTTTCTAGg taaagtctaggttatagtttgatagcttttttgagcaagaatctgtggtaatgtggtggcttactaagaaacactttgattcaacagGTCTTATCGCAGC AGCGTCTGGGTGTCTAGAATCAGTATTGCAAACAGGTGGCAAGGTGAACATAGTTTCGAAAAATGGAGTAGCCAATGGATCTGCAATGGGGAAAGTTCAT CAGAACGGCAATGTCTATAGCAATGGAAACGGGCTTCACCACTGActcgagaaaggaacaattttactgcactttttaagcttttttgcttttaatcaaa gctttctttaagcaagtcgacatgtatagtccctgagttttgtttccttgtcttgaaaacttgtttggtttcgttgttagggtttggggagagacatgga tatgaatgtgcttcctgttcttgggttactttttacctttcatagctaaaaactaataaagatctatattctagtttcttctggctcgttgaataataac aaaaatttgcagtttgtgttttgtaactaataggtgctttcaacaacttaagtaaagataatatccaagaactttgaatgttacatttttctgtctttat tgtatcgctcaatttatttttcccatagaacttgtcaagctaaatcttttcgtactttttagtgttcatgtttttgcagccatccgagctgcgtctgttt ta
Border_1 (94848_RB)
ATTAGGCACCCCAGGCTTTACACTTTATGCTTCCGGCTCGTATGTTGTGTGGAATTGTGAGCGGATAACAATTTCACACAGGAAACAGCTATGACCATGA
TTACACCAAGCTCGAAATTAACCCTCACTAAAGGGAACAAAAGCTGGAGCTCGCTTGAGCTTGGATCAGATTGTCGTTTCCCGCCTTCAGTTTATGCATG
CTAGCATATGCCATGGAAACGTCCGCAATGTGTTATTACGTTAGCTTATAAGCCGCCGCCTTGAAAATCCAGAAGGCCATTTTTGTTGGTGAAAGGTAGA
ATTCGTAAATTTCTTCTGCTCACTTTATTGTTTCGACTCATACCCGATAATCTCTTCTATGTTTGGTAGAGATATCTTCTCAAAGTCTTATCTTTCCTTA
CCGTGTTCTGTGTTTTTTGATGATTTAGGTGAAGAAGAAGAAGCAGAGACAAAAACGATTATGAAGTACGTTTTGGTGACAGGAGGAGTGGTGAGTGGTC
TTGGCAAAGGTGTCACTGCTAGTAGCATTGGACTTCTCCTTCAAGCATGTGGTCTTCATCTACTTCG
| Start of BLAST Alignment: | NT < 223 / Upstream |
| First 15 bp Perfect Match: | NT < 221 / Upstream |
BLAST Details: Query Sequence: 94848_RB Length: (567 letters) Database: TIGR AGI BAC Sequences (DNA); Smallest Sum High Probability Sequences producing High-scoring Segment Pairs: Score P(N) N MBK21 60510 1608 1.9e-66 1 T2E22 60748 1608 1.9e-66 1 T2P3 68413 563 3.0e-19 1 T6C20 68339 563 3.0e-19 1 MBK21 60510 Length = 79,125 Minus Strand HSPs: Score = 1608 (247.3 bits), Expect = 1.9e-66, P = 1.9e-66 Identities = 326/330 (98%), Positives = 326/330 (98%), Strand = Minus / Plus Query: 566 GAAGT-AGATGAAGACCACATGCTTGAAGGAGAAGTCCAATGCTACTAGCAGTGACACCT 508 ||||| | | |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8892 GAAGTGACACGAAGACCACATGCTTGAAGGAGAAGTCCAATGCTACTAGCAGTGACACCT 8951 Query: 507 TTGCCAAGACCACTCACCACTCCTCCTGTCACCAAAACGTACTTCATAATCGTTTTTGTC 448 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8952 TTGCCAAGACCACTCACCACTCCTCCTGTCACCAAAACGTACTTCATAATCGTTTTTGTC 9011 Query: 447 TCTGCTTCTTCTTCTTCACCTAAATCATCAAAAAACACAGAACACGGTAAGGAAAGATAA 388 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9012 TCTGCTTCTTCTTCTTCACCTAAATCATCAAAAAACACAGAACACGGTAAGGAAAGATAA 9071 Query: 387 GACTTTGAGAAGATATCTCTACCAAACATAGAAGAGATTATCGGGTATGAGTCGAAACAA 328 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9072 GACTTTGAGAAGATATCTCTACCAAACATAGAAGAGATTATCGGGTATGAGTCGAAACAA 9131 Query: 327 TAAAGTGAGCAGAAGAAATTTACGAATTCTACCTTTCACCAACAAAAATGGCCTTCTGGA 268 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9132 TAAAGTGAGCAGAAGAAATTTACGAATTCTACCTTTCACCAACAAAAATGGCCTTCTGGA 9191 Query: 267 TTTTCAAGGCGGCGGCTTATAAGCTAACGT 238 |||||||||||||||||||||||||||| | Sbjct: 9192 TTTTCAAGGCGGCGGCTTATAAGCTAACCT 9221 T2E22 60748 Length = 105,768 Plus Strand HSPs: Score = 1608 (247.3 bits), Expect = 1.9e-66, P = 1.9e-66 Identities = 326/330 (98%), Positives = 326/330 (98%), Strand = Plus / Plus