OSU Syngenta vbi

SeedGenes Profile: AXR 6

Gene Information
Gene Symbol AXR 6
Chromosome Locus At4g02570   tair
Alleles in Database 3   See List OR Show All
Identity Confidence Confirmed
Alias Symbol CUL 1 (M. Estelle) Alternate Name
Gene Class Embryo Defective
Predicted Function Cullin 1 Protein
Function Details Component of SCF ubiquitin ligase complex
Gene Evidence
Sequenced Mutant Allele
M. Estelle (1 allele)
Molecular Complementation
P. Genschik (2 alleles)
Border Recovery
P. Genschik (2 alleles)
Database Release September, 2002
Predicted Sequences
Gene:5075 nucleotides
mRNA: 2747 nucleotides
Protein:  738 amino acids
cDNA Status FLcDNA Available: AY046030
Top BLAST Hits
Arabidopsis: AT1G02980.1 (69%)
Plant ESTs: Brassica napus (95%)
Model Genomes:  Homo sapiens (35%)
Subcellular Localization TargetP Not Targeted to Cell Compartment
SUBA
mRNA Expression Data NASCArray Spot History for 255441_at
    
Mutant Information
Allele Symbol axr 6-1cul 1-1cul 1-2
Mutant Class Embryo DefectiveEmbryo DefectiveEmbryo Defective
Source of Mutant L. HobbieGenschik / VersaillesGenschik / Versailles
Mutant Line Number    
Ecotype ColumbiaWassilewskijaWassilewskija
Genetic Background    
ABRC Stock CS3817  
Mutagen Treatment ChemicalT-DNAT-DNA
Insertion Mutant NoYes   DetailsYes   Details
Flanking Sequence    
Location of Mutation  Intron 17Exon 3
Terminal Phenotype Cotyledon  DetailsPreglobularPreglobular
Nomarski Phenotype   Images
Allelism Evidence Reference AlleleComplementation Test; Sequence IdentitySequence Identity
Database Release September, 2002September, 2002September, 2002
Seed Color Pale Green to Green  
Embryo Color Pale Green to Green  
Percent Mutant Seeds 23.7 %  
Chi - Square 1.0  
Seeds Counted 1135  
Percent Top Half 51.3 %  
Chi - Square 0.2  
Average Seed Length 520 ± 90 µm  
Average Embryo Length 350 ± 140 µm