Aug 17, 2018 4:41 PM
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Database Query
SeedGenes Profile: AtASP 38
Gene Information
Gene Symbol
AtASP 38
Chromosome Locus
At5g02190
Alleles in Database
2
See List
OR
Show All
Identity Confidence
Confirmed
Alias Symbol
PCS 1
(Y. Xia) Alternate Name
EMB 24
(D. Meinke) Complemetation Test
Gene Class
Embryo Defective
Predicted Function
Aspartic Protease
Function Details
None
Gene Evidence
Molecular Complementation
Xia / SAIL (1 allele)
Border Recovery
Xia / SAIL (1 allele)
Database Release
October, 2007
Predicted Sequences
Gene:
1687 nucleotides
mRNA:
1687 nucleotides
Protein:
453 amino acids
cDNA Status
FLcDNA Available:
AK226937
Top BLAST Hits
Arabidopsis
:
AT2G39710.1 (63%)
Plant ESTs:
Cotton (Gossypium) (70%)
Model Genomes:
None
Subcellular Localization
TargetP
Targeted to Chloroplasts
SUBA
mRNA Expression Data
NASCArray Spot History for
251025_at
Mutant Information
Allele Symbol
atasp 38
emb 24
Mutant Class
Embryo Defective
Embryo Defective
Source of Mutant
Xia / SAIL
D. Meinke
Mutant Line Number
SAIL_441_H06
109F-1C
Ecotype
Columbia
Columbia
Genetic Background
qrt
ABRC Stock
Mutagen Treatment
T-DNA
EMS
Insertion Mutant
Yes
Details
No
Flanking Sequence
Location of Mutation
Exon 1
Terminal Phenotype
Transition
Cotyledon
Nomarski Phenotype
Allelism Evidence
Reference Allele
Complementation Test
Database Release
October, 2007
December, 2010
Seed Color
Embryo Color
Percent Mutant Seeds
25.8 %
Chi - Square
Seeds Counted
Percent Top Half
53.0 %
Chi - Square
Average Seed Length
Average Embryo Length