OSU Syngenta vbi

SeedGenes Profile: BOB 1

Gene Information
Gene Symbol BOB 1
Chromosome Locus At5g53400   tair
Alleles in Database 2   See List OR Show All
Identity Confidence Confirmed
Alias Symbol  
Gene Class Embryo Defective
Predicted Function Noncanonical Small Heat Shock Protein (NudC)
Function Details Putative molecular chaperone
Gene Evidence
Sequenced Mutant Allele
K. Barton (1 allele)
Molecular Complementation
K. Barton (1 allele)
Border Recovery
Barton / Salk (1 allele)
Database Release December, 2010
Predicted Sequences
Gene:2128 nucleotides
mRNA: 1247 nucleotides
Protein:  304 amino acids
cDNA Status FLcDNA Available: BX829484
Top BLAST Hits
Arabidopsis: AT4G27890.1 (81%)
Plant ESTs: Brassica napus (75%)
Model Genomes:  Homo sapiens (57%)
Subcellular Localization TargetP Not Targeted to Cell Compartment
mRNA Expression Data NASCArray Spot History for 248258_at
Mutant Information
Allele Symbol bob 1-1bob 1-2
Mutant Class Embryo DefectiveEmbryo Defective
Source of Mutant K. BartonBarton / Salk
Mutant Line Number  SALK_001125
Ecotype Landsberg erectaColumbia
Genetic Background   
ABRC Stock   
Mutagen Treatment EMST-DNA
Insertion Mutant NoYes   Details
Flanking Sequence   
Location of Mutation Exon 3Exon 1
Terminal Phenotype GlobularGlobular
Nomarski Phenotype
Allelism Evidence Reference AlleleComplementation Test; Sequence Identity
Database Release December, 2010December, 2010
Seed Color   
Embryo Color   
Percent Mutant Seeds   
Chi - Square   
Seeds Counted   
Percent Top Half   
Chi - Square   
Average Seed Length   
Average Embryo Length