SeedGenes Profile: CIA 5

Gene Information Gene Symbol CIA 5 Chromosome Locus At2g15290   Alleles in Database 3   See List OR Show All Identity Confidence Confirmed Alias Symbol TIC 21 (H.M. Li) Alternate Name Gene Class Seed Pigment Predicted Function Chloroplast Import Protein Function Details None Gene Evidence Sequenced Mutant Allele H.M. Li (1 allele) Molecular Complementation H.M. Li (1 allele) Border Recovery Li / SAIL (1 allele) Border Recovery Li / Salk (1 allele) Database Release December, 2010 Predicted Sequences Gene: 1738 nucleotides mRNA: 1129 nucleotides Protein:   296 amino acids cDNA Status FLcDNA Available: AY057510 Top BLAST Hits Arabidopsis: Only self hit Plant ESTs: Brassica napus (87%) Model Genomes:   None Subcellular Localization TargetP Targeted to Chloroplasts SUBA mRNA Expression Data NASCArray Spot History for 263298_at

Mutant Information Allele Symbol cia 5-1 cia 5-2 cia 5-3 Mutant Class Seed Pigment Seed Pigment Seed Pigment Source of Mutant HM. Li Li / SAIL Myouga / Salk Mutant Line Number   SAIL_278_B02 SALK_104852 Ecotype Columbia Columbia Columbia Genetic Background       ABRC Stock       Mutagen Treatment EMS T-DNA T-DNA Insertion Mutant No Yes   Details Yes   Details Flanking Sequence       Location of Mutation Exon 3 Exon 2 Exon 1 Terminal Phenotype Pigment Defective Pigment Defective Pigment Defective Nomarski Phenotype Allelism Evidence Reference Allele Sequence Identity Sequence Identity Database Release December, 2010 December, 2010 December, 2010 Seed Color       Embryo Color       Percent Mutant Seeds     24.0 % Chi - Square     0.4 Seeds Counted     643 Percent Top Half       Chi - Square       Average Seed Length       Average Embryo Length