SeedGenes Profile: CLPP 5

Gene Information Gene Symbol CLPP 5 Chromosome Locus At1g02560   Alleles in Database 3   See List OR Show All Identity Confidence Confirmed Alias Symbol   Gene Class Embryo Defective Predicted Function Chloroplast Clp Protease Subunit Function Details None Gene Evidence Border Recovery van Wijk / Salk (1 allele) Border Recovery van Wijk / SAIL (2 alleles) Database Release December, 2010 Predicted Sequences Gene: 2250 nucleotides mRNA: 1341 nucleotides Protein:   298 amino acids cDNA Status FLcDNA Available: BX815808 Top BLAST Hits Arabidopsis: Only self hit Plant ESTs: Brassica napus (96%) Model Genomes:   Synechocystis (68%) Subcellular Localization TargetP Targeted to Chloroplasts SUBA mRNA Expression Data NASCArray Spot History for 260912_at

Mutant Information Allele Symbol clpp 5-1 clpp 5-2 clpp 5-3 Mutant Class Embryo Defective Embryo Defective Embryo Defective Source of Mutant van Wijk / Salk van Wijk / SAIL van Wijk / SAIL Mutant Line Number SALK_007708 SAIL_59_E07 SAIL_876_G06 Ecotype Columbia Columbia Columbia Genetic Background       ABRC Stock       Mutagen Treatment T-DNA T-DNA T-DNA Insertion Mutant Yes   Details Yes   Details Yes   Details Flanking Sequence       Location of Mutation Exon 4 Intron 5 Exon 2 Terminal Phenotype Globular Globular Globular Nomarski Phenotype Allelism Evidence Reference Allele Sequence Identity Sequence Identity Database Release December, 2010 December, 2010 December, 2010 Seed Color       Embryo Color       Percent Mutant Seeds       Chi - Square       Seeds Counted       Percent Top Half       Chi - Square       Average Seed Length       Average Embryo Length