Aug 17, 2018 4:41 PM
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Database Query
SeedGenes Profile: CYT 1
Gene Information
Gene Symbol
CYT 1
Chromosome Locus
At2g39770
Alleles in Database
2
See List
OR
Show All
Identity Confidence
Confirmed
Alias Symbol
VTC 1
(R. Last) Sequence Identity
EMB 101
(D. Meinke) Alternate Name
Gene Class
Embryo Defective
Predicted Function
Mannose-1-Phosphate Guanyltransferase; GDP-Mannose Pyrophosphorylase
Function Details
Catalyzes the production of GDP-mannose; required for N-glycosylation and vitamin C biosynthesis
Gene Evidence
Sequenced Mutant Allele
W. Lukowitz (2 alleles)
Database Release
March, 2002
Predicted Sequences
Gene:
2284 nucleotides
mRNA:
1491 nucleotides
Protein:
361 amino acids
cDNA Status
FLcDNA Available:
AY057541
Top BLAST Hits
Arabidopsis
:
AT3G55590.1 (84%)
Plant ESTs:
Brassica napus (95%)
Model Genomes:
Homo sapiens (61%)
Subcellular Localization
TargetP
Targeted to Mitochondria
SUBA
mRNA Expression Data
NASCArray Spot History for
245060_at
Mutant Information
Allele Symbol
cyt 1-1
cyt 1-2
Mutant Class
Embryo Defective
Embryo Defective
Source of Mutant
Meinke / Feldmann
Meinke / Feldmann
Mutant Line Number
1054
1985
Ecotype
Wassilewskija
Wassilewskija
Genetic Background
ABRC Stock
CS84607
CS84608
Mutagen Treatment
T-DNA
T-DNA
Insertion Mutant
No
No
Flanking Sequence
Location of Mutation
Exon 4
Exon 5
Terminal Phenotype
Cotyledon
Details
Cotyledon
Details
Nomarski Phenotype
Images
Images
Allelism Evidence
Reference Allele
Complementation Test; Sequence Identity
Database Release
March, 2002
March, 2002
Seed Color
Pale Green
Pale Yellow
Embryo Color
Pale Green
Pale Yellow
Percent Mutant Seeds
26.9 %
26.5 %
Chi - Square
2.0
1.3
Seeds Counted
1102
1078
Percent Top Half
52.7 %
54.5 %
Chi - Square
0.8
2.4
Average Seed Length
460 ± 40 µm
500 ± 30 µm
Average Embryo Length
180 ± 30 µm
140 ± 30 µm