OSU Syngenta vbi

SeedGenes Profile: CYT 1

Gene Information
Gene Symbol CYT 1
Chromosome Locus At2g39770   tair
Alleles in Database 2   See List OR Show All
Identity Confidence Confirmed
Alias Symbol VTC 1 (R. Last) Sequence Identity
EMB 101 (D. Meinke) Alternate Name
Gene Class Embryo Defective
Predicted Function Mannose-1-Phosphate Guanyltransferase; GDP-Mannose Pyrophosphorylase
Function Details Catalyzes the production of GDP-mannose; required for N-glycosylation and vitamin C biosynthesis
Gene Evidence
Sequenced Mutant Allele
W. Lukowitz (2 alleles)
Database Release March, 2002
Predicted Sequences
Gene:2284 nucleotides
mRNA: 1491 nucleotides
Protein:  361 amino acids
cDNA Status FLcDNA Available: AY057541
Top BLAST Hits
Arabidopsis: AT3G55590.1 (84%)
Plant ESTs: Brassica napus (95%)
Model Genomes:  Homo sapiens (61%)
Subcellular Localization TargetP Targeted to Mitochondria
SUBA
mRNA Expression Data NASCArray Spot History for 245060_at
    
Mutant Information
Allele Symbol cyt 1-1cyt 1-2
Mutant Class Embryo DefectiveEmbryo Defective
Source of Mutant Meinke / FeldmannMeinke / Feldmann
Mutant Line Number 10541985
Ecotype WassilewskijaWassilewskija
Genetic Background   
ABRC Stock CS84607CS84608
Mutagen Treatment T-DNAT-DNA
Insertion Mutant NoNo
Flanking Sequence   
Location of Mutation Exon 4Exon 5
Terminal Phenotype Cotyledon  DetailsCotyledon  Details
Nomarski Phenotype   Images  Images
Allelism Evidence Reference AlleleComplementation Test; Sequence Identity
Database Release March, 2002March, 2002
Seed Color Pale GreenPale Yellow
Embryo Color Pale GreenPale Yellow
Percent Mutant Seeds 26.9 %26.5 %
Chi - Square 2.01.3
Seeds Counted 11021078
Percent Top Half 52.7 %54.5 %
Chi - Square 0.82.4
Average Seed Length 460 ± 40 µm500 ± 30 µm
Average Embryo Length 180 ± 30 µm140 ± 30 µm