SeedGenes Profile: DCAF 1

Gene Information Gene Symbol DCAF 1 Chromosome Locus At4g31160   Alleles in Database 2   See List OR Show All Identity Confidence Confirmed Alias Symbol   Gene Class Embryo Defective Predicted Function Nuclear Ubiquitin E3 Ligase Function Details Protein degradation Gene Evidence Molecular Complementation X.W. Deng (1 allele) Border Recovery Deng / Salk (2 alleles) Database Release December, 2010 Predicted Sequences Gene: 7223 nucleotides mRNA: 5871 nucleotides Protein:   1883 amino acids cDNA Status EST Identified Top BLAST Hits Arabidopsis: Only self hit Plant ESTs: Rice (Oryza sativa) (48%) Model Genomes:   Homo sapiens (37%) Subcellular Localization TargetP Not Targeted to Cell Compartment SUBA mRNA Expression Data NASCArray Spot History for 253560_at

Mutant Information Allele Symbol dcaf 1-1 dcaf 1-2 Mutant Class Embryo Defective Embryo Defective Source of Mutant Deng / Salk Deng / Salk Mutant Line Number SALK_010755 SALK_114078 Ecotype Columbia Columbia Genetic Background     ABRC Stock     Mutagen Treatment T-DNA T-DNA Insertion Mutant Yes   Details Yes   Details Flanking Sequence     Location of Mutation Exon 3 Exon 12 Terminal Phenotype Globular Globular Nomarski Phenotype Allelism Evidence Reference Allele Sequence Identity Database Release December, 2010 December, 2010 Seed Color     Embryo Color     Percent Mutant Seeds     Chi - Square     Seeds Counted     Percent Top Half     Chi - Square     Average Seed Length     Average Embryo Length