SeedGenes Profile: EMB 1395

Gene Information Gene Symbol EMB 1395 Chromosome Locus At4g13940   Alleles in Database 3   See List OR Show All Identity Confidence Confirmed Alias Symbol HOG 1 (I. Furner) Sequence Identity MEE 58 (Sundaresan) Sequence Identity Gene Class Embryo Defective Predicted Function S-Adenosyl Homocysteine Hydrolase Function Details Amino acid and nucleotide metabolism; Indirect role in gene silencing Gene Evidence Double Border Recovery Meinke / Syngenta (1 allele) Border Recovery Furner / CSHL (1 allele) Border Recovery Furner / Salk (1 allele) Database Release September, 2003 Predicted Sequences Gene: 2278 nucleotides mRNA: 1990 nucleotides Protein:   485 amino acids cDNA Status FLcDNA Available: AF325037 Top BLAST Hits Arabidopsis: AT3G23810.1 (95%) Plant ESTs: Brassica napus (96%) Model Genomes:   Caenorhabditis elegans (58%) Subcellular Localization TargetP Not Targeted to Cell Compartment SUBA mRNA Expression Data NASCArray Spot History for 245356_at

Mutant Information Allele Symbol emb 1395 hog 1-4 hog 1-5 Mutant Class Embryo Defective Embryo Defective Embryo Defective Source of Mutant Meinke / Syngenta Furner / CSHL Furner / Salk Mutant Line Number 18372 GT1724 SALK_023915 Ecotype Wassilewskija   Columbia Genetic Background       ABRC Stock CS16194     Mutagen Treatment T-DNA Transposon T-DNA Insertion Mutant Yes   Details Yes   Details Yes   Details Flanking Sequence Details  (Help)     Location of Mutation Intron 1 Exon 1 Exon 2 Terminal Phenotype Globular  Details Globular Globular Nomarski Phenotype   Images Allelism Evidence Reference Allele Sequence Identity Sequence Identity Database Release September, 2003 October, 2007 October, 2007 Seed Color White     Embryo Color White     Percent Mutant Seeds 23.8 %     Chi - Square 0.6     Seeds Counted 776     Percent Top Half 61.1 %     Chi - Square 9.1     Average Seed Length 330 ± 100 µm     Average Embryo Length 30 ± 30 µm