OSU Syngenta vbi

SeedGenes Profile: EMB 2763

Gene Information
Gene Symbol EMB 2763
Chromosome Locus At2g17510   tair
Alleles in Database 2   See List OR Show All
Identity Confidence Confirmed
Alias Symbol RRP 44A (D. Belostotsky) Sequence Identity
Gene Class Embryo Defective
Predicted Function Ribonuclease II
Function Details Exosome component; Proposed role in ribosomal RNA processing
Gene Evidence
Single Border Recovery
Meinke / Salk (2 alleles)
Database Release October, 2007
Predicted Sequences
Gene:6765 nucleotides
mRNA: 3080 nucleotides
Protein:  933 amino acids
cDNA Status FLcDNA Available: AY057479
Top BLAST Hits
Arabidopsis: Only self hit
Plant ESTs: Rice (Oryza sativa) (71%)
Model Genomes:  Homo sapiens (47%)
Subcellular Localization TargetP Targeted to Mitochondria
SUBA
mRNA Expression Data NASCArray Spot History for 263077_at
    
Mutant Information
Allele Symbol emb 2763-1emb 2763-2
Mutant Class Embryo DefectiveEmbryo Defective
Source of Mutant Meinke / SalkMeinke / Salk
Mutant Line Number SALK_074658SALK_037533
Ecotype ColumbiaColumbia
Genetic Background   
ABRC Stock   
Mutagen Treatment T-DNAT-DNA
Insertion Mutant Yes   DetailsYes   Details
Flanking Sequence   
Location of Mutation Exon 12Exon 10
Terminal Phenotype Cotyledon  DetailsPreglobular  Details
Nomarski Phenotype   ImagesEarly Globular  Images
Allelism Evidence Reference AlleleComplementation Test; Sequence Identity
Database Release October, 2007October, 2007
Seed Color Pale YellowWhite
Embryo Color Pale YellowWhite
Percent Mutant Seeds 24.2 %11.2 %
Chi - Square 0.4116.0
Seeds Counted 11341137
Percent Top Half 58.0 %62.9 %
Chi - Square 0.48.6
Average Seed Length 490 ± 70 µm230 ± 120 µm
Average Embryo Length 190 ± 90 µm30 ± 70 µm