OSU Syngenta vbi

SeedGenes Profile: EMB 2765

Gene Information
Gene Symbol EMB 2765
Chromosome Locus At2g38770   tair
Alleles in Database 2   See List OR Show All
Identity Confidence Confirmed
Alias Symbol  
Gene Class Embryo Defective
Predicted Function U5 Associated Protein (Aquarius)
Function Details Proposed role in pre-mRNA splicing
Gene Evidence
Single Border Recovery
Meinke / Salk (2 alleles)
Database Release October, 2007
Predicted Sequences
Gene:7376 nucleotides
mRNA: 4837 nucleotides
Protein:  1509 amino acids
cDNA Status FLcDNA Available: AY099864
Top BLAST Hits
Arabidopsis: Only self hit
Plant ESTs: Rice (Oryza sativa) (73%)
Model Genomes:  Homo sapiens (49%)
Subcellular Localization TargetP Not Targeted to Cell Compartment
SUBA
mRNA Expression Data NASCArray Spot History for 266410_at
    
Mutant Information
Allele Symbol emb 2765-1emb 2765-2
Mutant Class Embryo DefectiveEmbryo Defective
Source of Mutant Meinke / SalkMeinke / Salk
Mutant Line Number SALK_147287SALK_141518
Ecotype ColumbiaColumbia
Genetic Background   
ABRC Stock   
Mutagen Treatment T-DNAT-DNA
Insertion Mutant Yes   DetailsYes   Details
Flanking Sequence   
Location of Mutation Exon 1Intron 6
Terminal Phenotype Globular  DetailsGlobular  Details
Nomarski Phenotype   Images  Images
Allelism Evidence Reference AlleleComplementation Test; Sequence Identity
Database Release October, 2007October, 2007
Seed Color White to Pale YellowWhite
Embryo Color White to Pale YellowWhite
Percent Mutant Seeds 21.6 %39.0 %
Chi - Square 6.573.1
Seeds Counted 1021695
Percent Top Half 64.1 %34.3 %
Chi - Square 6.526.7
Average Seed Length 520 ± 70 µm510 ± 120 µm
Average Embryo Length 80 ± 50 µm70 ± 60 µm