OSU Syngenta vbi

SeedGenes Profile: EMB 2795

Gene Information
Gene Symbol EMB 2795
Chromosome Locus At2g32590   tair
Alleles in Database 2   See List OR Show All
Identity Confidence Confirmed
Alias Symbol  
Gene Class Embryo Defective
Predicted Function Non-SMC Condensin Complex Subunit H
Function Details Sister chromatid segregation in mitosis
Gene Evidence
Border Recovery
Meinke / Salk (2 alleles)
Database Release December, 2010
Predicted Sequences
Gene:3790 nucleotides
mRNA: 2016 nucleotides
Protein:  671 amino acids
cDNA Status FLcDNA Available: AB193292
Top BLAST Hits
Arabidopsis: Only self hit
Plant ESTs: Medicago truncatula (54%)
Model Genomes:  Danio rerio (26%)
Subcellular Localization TargetP Targeted to Chloroplasts
SUBA
mRNA Expression Data NASCArray Spot History for 267118_at
    
Mutant Information
Allele Symbol emb 2795-1emb 2795-2
Mutant Class Embryo DefectiveEmbryo Defective
Source of Mutant Meinke / SalkMeinke / Salk
Mutant Line Number SALK_072400SALK_017766
Ecotype ColumbiaColumbia
Genetic Background   
ABRC Stock   
Mutagen Treatment T-DNAT-DNA
Insertion Mutant Yes   DetailsYes   Details
Flanking Sequence   
Location of Mutation Intron 9Intron 12 or Exon 13
Terminal Phenotype Preglobular  DetailsPreglobular  Details
Nomarski Phenotype   Images  Images
Allelism Evidence Reference AlleleComplementation Test; Sequence Identity
Database Release December, 2010December, 2010
Seed Color WhiteWhite
Embryo Color WhiteWhite
Percent Mutant Seeds 29.5 %23.3 %
Chi - Square 2.40.4
Seeds Counted 220240
Percent Top Half 43.1 %42.8 %
Chi - Square 1.21.1
Average Seed Length 410 ± 110 µm390 ± 110 µm
Average Embryo Length 20 ± 20 µm20 ± 20 µm