SeedGenes Profile: EMB 2817

Gene Information Gene Symbol EMB 2817 Chromosome Locus At5g08470   Alleles in Database 2   See List OR Show All Identity Confidence Confirmed Alias Symbol   Gene Class Embryo Defective Predicted Function AAA ATPase (PEX1) Function Details Peroxisome biogenesis Gene Evidence Border Recovery Meinke / Salk (2 alleles) Database Release December, 2010 Predicted Sequences Gene: 7132 nucleotides mRNA: 3718 nucleotides Protein:   1130 amino acids cDNA Status FLcDNA Available: AY094389 Top BLAST Hits Arabidopsis: Only self hit Plant ESTs: Rice (Oryza sativa) (47%) Model Genomes:   Homo sapiens (44%) Subcellular Localization TargetP Not Targeted to Cell Compartment SUBA mRNA Expression Data NASCArray Spot History for 250520_at

Mutant Information Allele Symbol emb 2817-1 emb 2817-2 Mutant Class Embryo Defective Embryo Defective Source of Mutant Meinke / Salk Meinke / Salk Mutant Line Number SALK_050458 SALK_094818 Ecotype Columbia Columbia Genetic Background     ABRC Stock     Mutagen Treatment T-DNA T-DNA Insertion Mutant Yes   Details Yes   Details Flanking Sequence     Location of Mutation Intron 10 Exon 8 Terminal Phenotype Preglobular Preglobular Nomarski Phenotype Allelism Evidence Reference Allele Complementation Test; Sequence Identity Database Release December, 2010 December, 2010 Seed Color     Embryo Color     Percent Mutant Seeds 13.3 % 20.4 % Chi - Square 47.5 3.8 Seeds Counted 581 314 Percent Top Half     Chi - Square     Average Seed Length     Average Embryo Length