OSU Syngenta vbi

SeedGenes Profile: EMB 2820

Gene Information
Gene Symbol EMB 2820
Chromosome Locus At5g24670   tair
Alleles in Database 2   See List OR Show All
Identity Confidence Confirmed
Alias Symbol TAD 3 (D. Meinke) Alternate Name
Gene Class Embryo Defective
Predicted Function Adenosine Deaminase (TAD3)
Function Details Modification of wobble position of tRNA
Gene Evidence
Border Recovery
Meinke / GABI (2 alleles)
Database Release December, 2010
Predicted Sequences
Gene:3122 nucleotides
mRNA: 1785 nucleotides
Protein:  400 amino acids
cDNA Status FLcDNA Available: AK228326
Top BLAST Hits
Arabidopsis: Only self hit
Plant ESTs: Medicago truncatula (50%)
Model Genomes:   None
Subcellular Localization TargetP Not Targeted to Cell Compartment
SUBA
mRNA Expression Data NASCArray Spot History for 246957_at
    
Mutant Information
Allele Symbol emb 2820-1emb 2820-2
Mutant Class Embryo DefectiveEmbryo Defective
Source of Mutant Meinke / GABIMeinke / GABI
Mutant Line Number GABI_141G12GABI_589G01
Ecotype ColumbiaColumbia
Genetic Background   
ABRC Stock   
Mutagen Treatment T-DNAT-DNA
Insertion Mutant Yes   DetailsYes   Details
Flanking Sequence   
Location of Mutation Intron 8Intron 4
Terminal Phenotype PreglobularPreglobular
Nomarski Phenotype
Allelism Evidence Reference AlleleComplementation Test; Sequence Identity
Database Release December, 2010December, 2010
Seed Color   
Embryo Color   
Percent Mutant Seeds 22.9 %22.4 %
Chi - Square 2.43.6
Seeds Counted 9971009
Percent Top Half   
Chi - Square   
Average Seed Length   
Average Embryo Length