OSU Syngenta vbi

SeedGenes Profile: HCS 1

Gene Information
Gene Symbol HCS 1
Chromosome Locus At2g25710   tair
Alleles in Database 2   See List OR Show All
Identity Confidence Confirmed
Alias Symbol  
Gene Class Embryo Defective
Predicted Function Holocarboxylase Synthetase
Function Details Biotin attachment to carboxylases and decarboxylases
Gene Evidence
Border Recovery
Alban / SAIL (1 allele)
Border Recovery
Alban / FLAG (1 allele)
Database Release December, 2010
Predicted Sequences
Gene:2720 nucleotides
mRNA: 1481 nucleotides
Protein:  367 amino acids
cDNA Status FLcDNA Available: BX821008
Top BLAST Hits
Arabidopsis: AT1G37150.1 (89%)
Plant ESTs: Brassica napus (84%)
Model Genomes:  Homo sapiens (31%)
Subcellular Localization TargetP Targeted to Mitochondria
SUBA
mRNA Expression Data NASCArray Spot History for 265887_at
    
Mutant Information
Allele Symbol hcs 1-1hcs 1-2
Mutant Class Embryo DefectiveEmbryo Defective
Source of Mutant Alban / SAILAlban / FLAG
Mutant Line Number SAIL_1277_E03FLAG_486E08
Ecotype ColumbiaWassilewskija
Genetic Background   
ABRC Stock   
Mutagen Treatment T-DNAT-DNA
Insertion Mutant Yes   DetailsYes   Details
Flanking Sequence   
Location of Mutation Exon 2Intron 9
Terminal Phenotype PreglobularPreglobular
Nomarski Phenotype
Allelism Evidence Reference AlleleSequence Identity
Database Release December, 2010December, 2010
Seed Color   
Embryo Color   
Percent Mutant Seeds   
Chi - Square   
Seeds Counted   
Percent Top Half   
Chi - Square   
Average Seed Length   
Average Embryo Length