Aug 17, 2018 4:41 PM
Home
|
Access Page
|
Database Query
SeedGenes Profile: OEP 80
Gene Information
Gene Symbol
OEP 80
Chromosome Locus
At5g19620
Alleles in Database
3
See List
OR
Show All
Identity Confidence
Confirmed
Alias Symbol
EMB 213
(D. Meinke) Complemetation Test
Gene Class
Embryo Defective
Predicted Function
Chloroplast Outer Envelope Protein
Function Details
Chloroplast protein import and/or biogenesis
Gene Evidence
Molecular Complementation
P. Jarvis (1 allele)
Double Border Recovery
Jarvis / Koncz (1 allele)
Border Recovery
Jarvis / GABI (1 allele)
Database Release
December, 2010
Predicted Sequences
Gene:
4643 nucleotides
mRNA:
2523 nucleotides
Protein:
732 amino acids
cDNA Status
FLcDNA Available:
AF360205
Top BLAST Hits
Arabidopsis
:
Only self hit
Plant ESTs:
Tomato (Lycopersicon esculentum) (79%)
Model Genomes:
Synechocystis (33%)
Subcellular Localization
TargetP
Targeted to Chloroplasts
SUBA
mRNA Expression Data
NASCArray Spot History for
245914_at
Mutant Information
Allele Symbol
oep 80-1
oep 80-2
emb 213
Mutant Class
Embryo Defective
Embryo Defective
Embryo Defective
Source of Mutant
Jarvis / Koncz
Jarvis / GABI
Meinke / DuPont
Mutant Line Number
89350
GABI_429H12
666
Ecotype
Columbia
Wassilewskija
Genetic Background
ABRC Stock
Mutagen Treatment
T-DNA
T-DNA
T-DNA
Insertion Mutant
Yes
Details
Yes
Details
No
Flanking Sequence
Location of Mutation
Intron 10
Intron 5
Terminal Phenotype
Globular
Globular
Transition
Nomarski Phenotype
Allelism Evidence
Reference Allele
Sequence Identity
Complementation Test
Database Release
December, 2010
December, 2010
December, 2010
Seed Color
Embryo Color
Percent Mutant Seeds
22.2 %
Chi - Square
Seeds Counted
Percent Top Half
Chi - Square
Average Seed Length
Average Embryo Length