OSU Syngenta vbi

SeedGenes Profile: PTS

Gene Information
Gene Symbol PTS
Chromosome Locus At5g48840   tair
Alleles in Database 2   See List OR Show All
Identity Confidence Confirmed
Alias Symbol  
Gene Class Embryo Defective
Predicted Function Pantothenate Synthetase
Function Details Biosynthesis of vitamin B5; Coenzyme A (CoA) function
Gene Evidence
Molecular Complementation
U. Genschel (1 allele)
Border Recovery
Genschel / Salk (2 alleles)
Database Release December, 2010
Predicted Sequences
Gene:1521 nucleotides
mRNA: 1235 nucleotides
Protein:  310 amino acids
cDNA Status FLcDNA Available: AK175238
Top BLAST Hits
Arabidopsis: Only self hit
Plant ESTs: Populus (69%)
Model Genomes:  Escherichia coli (42%)
Subcellular Localization TargetP Not Targeted to Cell Compartment
SUBA
mRNA Expression Data NASCArray Spot History for 248680_at
    
Mutant Information
Allele Symbol pts-1pts-2
Mutant Class Embryo DefectiveEmbryo Defective
Source of Mutant Genschel / SalkGenschel / Salk
Mutant Line Number SALK_101909SALK_594477
Ecotype ColumbiaColumbia
Genetic Background   
ABRC Stock   
Mutagen Treatment T-DNAT-DNA
Insertion Mutant Yes   DetailsYes   Details
Flanking Sequence   
Location of Mutation Exon 2Intron 10
Terminal Phenotype PreglobularPreglobular
Nomarski Phenotype
Allelism Evidence Reference AlleleSequence Identity
Database Release December, 2010December, 2010
Seed Color   
Embryo Color   
Percent Mutant Seeds   
Chi - Square   
Seeds Counted   
Percent Top Half   
Chi - Square   
Average Seed Length   
Average Embryo Length