SeedGenes Profile: PTS

Gene Information Gene Symbol PTS Chromosome Locus At5g48840   Alleles in Database 2   See List OR Show All Identity Confidence Confirmed Alias Symbol   Gene Class Embryo Defective Predicted Function Pantothenate Synthetase Function Details Biosynthesis of vitamin B5; Coenzyme A (CoA) function Gene Evidence Molecular Complementation U. Genschel (1 allele) Border Recovery Genschel / Salk (2 alleles) Database Release December, 2010 Predicted Sequences Gene: 1521 nucleotides mRNA: 1235 nucleotides Protein:   310 amino acids cDNA Status FLcDNA Available: AK175238 Top BLAST Hits Arabidopsis: Only self hit Plant ESTs: Populus (69%) Model Genomes:   Escherichia coli (42%) Subcellular Localization TargetP Not Targeted to Cell Compartment SUBA mRNA Expression Data NASCArray Spot History for 248680_at

Mutant Information Allele Symbol pts-1 pts-2 Mutant Class Embryo Defective Embryo Defective Source of Mutant Genschel / Salk Genschel / Salk Mutant Line Number SALK_101909 SALK_594477 Ecotype Columbia Columbia Genetic Background     ABRC Stock     Mutagen Treatment T-DNA T-DNA Insertion Mutant Yes   Details Yes   Details Flanking Sequence     Location of Mutation Exon 2 Intron 10 Terminal Phenotype Preglobular Preglobular Nomarski Phenotype Allelism Evidence Reference Allele Sequence Identity Database Release December, 2010 December, 2010 Seed Color     Embryo Color     Percent Mutant Seeds     Chi - Square     Seeds Counted     Percent Top Half     Chi - Square     Average Seed Length     Average Embryo Length