OSU Syngenta vbi

SeedGenes Profile: SCO 1

Gene Information
Gene Symbol SCO 1
Chromosome Locus At1g62750   tair
Alleles in Database 2   See List OR Show All
Identity Confidence Confirmed
Alias Symbol  
Gene Class Embryo Defective
Predicted Function Plastid Elongation Factor G
Function Details Translation in chloroplasts
Gene Evidence
Border Recovery
Hangarter / Salk (2 alleles)
Database Release October, 2007
Predicted Sequences
Gene:3014 nucleotides
mRNA: 2666 nucleotides
Protein:  783 amino acids
cDNA Status FLcDNA Available: AY039936
Top BLAST Hits
Arabidopsis: AT2G45030.1 (45%)
Plant ESTs: Brassica napus (95%)
Model Genomes:  Escherichia coli (59%)
Subcellular Localization TargetP Targeted to Chloroplasts
SUBA
mRNA Expression Data NASCArray Spot History for 262645_at
    
Mutant Information
Allele Symbol sco 1-2sco 1-3
Mutant Class Embryo DefectiveEmbryo Defective
Source of Mutant Hangarter / SalkHangarter / Salk
Mutant Line Number SALK_046154SALK_039084
Ecotype ColumbiaColumbia
Genetic Background   
ABRC Stock   
Mutagen Treatment T-DNAT-DNA
Insertion Mutant Yes   DetailsYes   Details
Flanking Sequence   
Location of Mutation Exon 3Exon 4
Terminal Phenotype GlobularGlobular
Nomarski Phenotype
Allelism Evidence Reference AlleleSequence Identity
Database Release October, 2007October, 2007
Seed Color   
Embryo Color   
Percent Mutant Seeds   
Chi - Square   
Seeds Counted   
Percent Top Half   
Chi - Square   
Average Seed Length   
Average Embryo Length