SeedGenes Profile: SIG 5

Gene Information Gene Symbol SIG 5 Chromosome Locus At5g24120   Alleles in Database 2   See List OR Show All Identity Confidence Confirmed Alias Symbol   Gene Class Embryo Defective Predicted Function RNA Polymerase Factor Function Details Transcription of chloroplast genes Gene Evidence Border Recovery L. Allison (2 alleles) Database Release September, 2003 Predicted Sequences Gene: 2679 nucleotides mRNA: 1904 nucleotides Protein:   517 amino acids cDNA Status FLcDNA Available: BX830450 Top BLAST Hits Arabidopsis: Only self hit Plant ESTs: Vitis vinifera (64%) Model Genomes:   Synechocystis (32%) Subcellular Localization TargetP Targeted to Chloroplasts SUBA mRNA Expression Data NASCArray Spot History for 249769_at

Mutant Information Allele Symbol sig 5-2 sig 5-1 Mutant Class Embryo Defective Embryo Defective Source of Mutant Allison / SAIL Allison / Madison Mutant Line Number     Ecotype Columbia Wassilewskija Genetic Background     ABRC Stock     Mutagen Treatment T-DNA T-DNA Insertion Mutant Yes   Details Yes   Details Flanking Sequence     Location of Mutation Exon 2 Exon 5 Terminal Phenotype Preglobular Preglobular Nomarski Phenotype Allelism Evidence Reference Allele Sequence Identity Database Release September, 2003 September, 2003 Seed Color     Embryo Color     Percent Mutant Seeds     Chi - Square     Seeds Counted     Percent Top Half     Chi - Square     Average Seed Length     Average Embryo Length