OSU Syngenta vbi

SeedGenes Profile: SIG 5

Gene Information
Gene Symbol SIG 5
Chromosome Locus At5g24120   tair
Alleles in Database 2   See List OR Show All
Identity Confidence Confirmed
Alias Symbol  
Gene Class Embryo Defective
Predicted Function RNA Polymerase Factor
Function Details Transcription of chloroplast genes
Gene Evidence
Border Recovery
L. Allison (2 alleles)
Database Release September, 2003
Predicted Sequences
Gene:2679 nucleotides
mRNA: 1904 nucleotides
Protein:  517 amino acids
cDNA Status FLcDNA Available: BX830450
Top BLAST Hits
Arabidopsis: Only self hit
Plant ESTs: Vitis vinifera (64%)
Model Genomes:  Synechocystis (32%)
Subcellular Localization TargetP Targeted to Chloroplasts
mRNA Expression Data NASCArray Spot History for 249769_at
Mutant Information
Allele Symbol sig 5-2sig 5-1
Mutant Class Embryo DefectiveEmbryo Defective
Source of Mutant Allison / SAILAllison / Madison
Mutant Line Number   
Ecotype ColumbiaWassilewskija
Genetic Background   
ABRC Stock   
Mutagen Treatment T-DNAT-DNA
Insertion Mutant Yes   DetailsYes   Details
Flanking Sequence   
Location of Mutation Exon 2Exon 5
Terminal Phenotype PreglobularPreglobular
Nomarski Phenotype
Allelism Evidence Reference AlleleSequence Identity
Database Release September, 2003September, 2003
Seed Color   
Embryo Color   
Percent Mutant Seeds   
Chi - Square   
Seeds Counted   
Percent Top Half   
Chi - Square   
Average Seed Length   
Average Embryo Length