OSU Syngenta vbi

SeedGenes Profile: SKL 1

Gene Information
Gene Symbol SKL 1
Chromosome Locus At3g26900   tair
Alleles in Database 2   See List OR Show All
Identity Confidence Confirmed
Alias Symbol  
Gene Class Seed Pigment
Predicted Function Uncertain
Function Details Shikimate kinase-like
Gene Evidence
Border Recovery
Christendat / Salk (2 alleles)
Database Release December, 2010
Predicted Sequences
Gene:2306 nucleotides
mRNA: 1038 nucleotides
Protein:  280 amino acids
cDNA Status FLcDNA Available: BX823472
Top BLAST Hits
Arabidopsis: Only self hit
Plant ESTs: Brassica napus (79%)
Model Genomes:   None
Subcellular Localization TargetP Targeted to Chloroplasts
SUBA
mRNA Expression Data NASCArray Spot History for 258281_at
    
Mutant Information
Allele Symbol skl 1-8skl 1-3
Mutant Class Seed PigmentSeed Pigment
Source of Mutant Christendat / SalkChristendat / Salk
Mutant Line Number SALK_12165xSALK_125796
Ecotype ColumbiaColumbia
Genetic Background   
ABRC Stock   
Mutagen Treatment T-DNAT-DNA
Insertion Mutant Yes   DetailsYes   Details
Flanking Sequence   
Location of Mutation Exon 8Intron 3
Terminal Phenotype Pigment DefectivePigment Defective
Nomarski Phenotype
Allelism Evidence Reference AlleleComplementation Test; Sequence Identity
Database Release December, 2010December, 2010
Seed Color   
Embryo Color   
Percent Mutant Seeds   
Chi - Square   
Seeds Counted   
Percent Top Half   
Chi - Square   
Average Seed Length   
Average Embryo Length