Aug 17, 2018 4:32 PM
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Database Query
SeedGenes Profile: AGY 1
Gene Information
Gene Symbol
AGY 1
Chromosome Locus
At4g01800
Alleles in Database
2
See List
OR
Show All
Identity Confidence
Confirmed
Alias Symbol
Gene Class
Seed Pigment
Predicted Function
Thylakoid Protein Translocase (cpSecA)
Function Details
Protein transport
Gene Evidence
Border Recovery
Wang / Salk (1 allele)
Border Recovery
(1 allele)
Database Release
December, 2010
Predicted Sequences
Gene:
5410 nucleotides
mRNA:
3273 nucleotides
Protein:
1022 amino acids
cDNA Status
EST Identified
Top BLAST Hits
Arabidopsis
:
AT1G21650.1 (42%)
Plant ESTs:
Rice (Oryza sativa) (85%)
Model Genomes:
Synechocystis (58%)
Subcellular Localization
TargetP
Targeted to Chloroplasts
SUBA
mRNA Expression Data
NASCArray Spot History for
255540_at
Mutant Information
Allele Symbol
agy 1-2
Mutant Class
Seed Pigment
Source of Mutant
Mutant Line Number
Ecotype
Columbia
Genetic Background
ABRC Stock
Mutagen Treatment
T-DNA
Insertion Mutant
Yes
Details
Flanking Sequence
Location of Mutation
Exon 3
Terminal Phenotype
Pigment Defective
Nomarski Phenotype
Allelism Evidence
Complementation Test; Sequence Identity
Database Release
December, 2010
Seed Color
Embryo Color
Percent Mutant Seeds
Chi - Square
Seeds Counted
Percent Top Half
Chi - Square
Average Seed Length
Average Embryo Length