SeedGenes Profile: AGY 1

Gene Information Gene Symbol AGY 1 Chromosome Locus At4g01800   Alleles in Database 2   See List OR Show All Identity Confidence Confirmed Alias Symbol   Gene Class Seed Pigment Predicted Function Thylakoid Protein Translocase (cpSecA) Function Details Protein transport Gene Evidence Border Recovery Wang / Salk (1 allele) Border Recovery (1 allele) Database Release December, 2010 Predicted Sequences Gene: 5410 nucleotides mRNA: 3273 nucleotides Protein:   1022 amino acids cDNA Status EST Identified Top BLAST Hits Arabidopsis: AT1G21650.1 (42%) Plant ESTs: Rice (Oryza sativa) (85%) Model Genomes:   Synechocystis (58%) Subcellular Localization TargetP Targeted to Chloroplasts SUBA mRNA Expression Data NASCArray Spot History for 255540_at

Mutant Information Allele Symbol agy 1-1 agy 1-2 Mutant Class Seed Pigment Seed Pigment Source of Mutant Wang / Salk Mutant Line Number SALK_063371   Ecotype Columbia Columbia Genetic Background     ABRC Stock     Mutagen Treatment T-DNA T-DNA Insertion Mutant Yes   Details Yes   Details Flanking Sequence     Location of Mutation Exon 5 Exon 3 Terminal Phenotype Pigment Defective Pigment Defective Nomarski Phenotype Allelism Evidence Reference Allele Complementation Test; Sequence Identity Database Release December, 2010 December, 2010 Seed Color     Embryo Color     Percent Mutant Seeds     Chi - Square     Seeds Counted     Percent Top Half     Chi - Square     Average Seed Length     Average Embryo Length