SeedGenes Profile: APG 3

Gene Information Gene Symbol APG 3 Chromosome Locus At3g62910   Alleles in Database 3   See List OR Show All Identity Confidence Confirmed Alias Symbol   Gene Class Seed Pigment Predicted Function Translation Releasing Factor RF-1 Function Details Translation in cytoplasm Gene Evidence Single Border Recovery Meinke / Syngenta (1 allele) Border Recovery Meinke / Syngenta (2 alleles) Database Release September, 2002 Predicted Sequences Gene: 2874 nucleotides mRNA: 1417 nucleotides Protein:   422 amino acids cDNA Status FLcDNA Available: AY090253 Top BLAST Hits Arabidopsis: AT2G47020.1 (40%) Plant ESTs: Lotus japonicus (79%) Model Genomes:   Synechocystis (59%) Subcellular Localization TargetP Targeted to Chloroplasts SUBA mRNA Expression Data NASCArray Spot History for 251193_at

Mutant Information Allele Symbol apg 3-2S apg 3-3S Mutant Class Seed Pigment Seed Pigment Source of Mutant Meinke / Syngenta Meinke / Syngenta Mutant Line Number 83578 99036 Ecotype Columbia Columbia Genetic Background     ABRC Stock CS16117 CS16118 Mutagen Treatment T-DNA T-DNA Insertion Mutant Yes   Details Yes   Details Flanking Sequence     Location of Mutation     Terminal Phenotype Pigment Defective Pigment Defective Nomarski Phenotype Allelism Evidence Reference Allele Complementation Test; Sequence Identity Database Release September, 2002 September, 2002 Seed Color Pale Yellow White Embryo Color Pale Yellow White Percent Mutant Seeds 25.2 % 27.2 % Chi - Square <0.1 2.9 Seeds Counted 1159 1144 Percent Top Half 48.6 % 52.7 % Chi - Square 0.2 0.9 Average Seed Length     Average Embryo Length