SeedGenes Profile: APG 3

Gene Information Gene Symbol APG 3 Chromosome Locus At3g62910   Alleles in Database 3   See List OR Show All Identity Confidence Confirmed Alias Symbol   Gene Class Seed Pigment Predicted Function Translation Releasing Factor RF-1 Function Details Translation in cytoplasm Gene Evidence Single Border Recovery Meinke / Syngenta (1 allele) Border Recovery Meinke / Syngenta (2 alleles) Database Release September, 2002 Predicted Sequences Gene: 2874 nucleotides mRNA: 1417 nucleotides Protein:   422 amino acids cDNA Status FLcDNA Available: AY090253 Top BLAST Hits Arabidopsis: AT2G47020.1 (40%) Plant ESTs: Lotus japonicus (79%) Model Genomes:   Synechocystis (59%) Subcellular Localization TargetP Targeted to Chloroplasts SUBA mRNA Expression Data NASCArray Spot History for 251193_at

Mutant Information Allele Symbol apg 3-2S apg 3-3S apg 3-1S Mutant Class Seed Pigment Seed Pigment Seed Pigment Source of Mutant Meinke / Syngenta Meinke / Syngenta Meinke / Syngenta Mutant Line Number 83578 99036 125189 Ecotype Columbia Columbia Columbia Genetic Background       ABRC Stock CS16117 CS16118   Mutagen Treatment T-DNA T-DNA T-DNA Insertion Mutant Yes   Details Yes   Details Yes   Details Flanking Sequence     Details  (Help) Location of Mutation     Intron 10 Terminal Phenotype Pigment Defective Pigment Defective Pigment Defective Nomarski Phenotype Allelism Evidence Reference Allele Complementation Test; Sequence Identity Complementation Test; Sequence Identity Database Release September, 2002 September, 2002 September, 2002 Seed Color Pale Yellow White   Embryo Color Pale Yellow White   Percent Mutant Seeds 25.2 % 27.2 %   Chi - Square <0.1 2.9   Seeds Counted 1159 1144   Percent Top Half 48.6 % 52.7 %   Chi - Square 0.2 0.9   Average Seed Length       Average Embryo Length