SeedGenes Profile: APG 6

Gene Information Gene Symbol APG 6 Chromosome Locus At5g15450   Alleles in Database 3   See List OR Show All Identity Confidence Confirmed Alias Symbol   Gene Class Seed Pigment Predicted Function Chloroplast Hsp101 Homolog (ClpB3) Function Details Molecular chaperone; Stress response Gene Evidence Border Recovery Myouga / Riken (2 alleles) Border Recovery Myouga / Salk (1 allele) Database Release December, 2010 Predicted Sequences Gene: 4136 nucleotides mRNA: 3186 nucleotides Protein:   968 amino acids cDNA Status EST Identified Top BLAST Hits Arabidopsis: AT2G25140.1 (69%) Plant ESTs: Tomato (Lycopersicon esculentum) (83%) Model Genomes:   Synechocystis (67%) Subcellular Localization TargetP Targeted to Chloroplasts SUBA mRNA Expression Data NASCArray Spot History for 246554_at

Mutant Information Allele Symbol apg 6-1 Mutant Class Seed Pigment Source of Mutant Myouga / Riken Mutant Line Number RATM13-1573-1 Ecotype Nossen Genetic Background   ABRC Stock   Mutagen Treatment Transposon Insertion Mutant Yes   Details Flanking Sequence   Location of Mutation 5' UTR Terminal Phenotype Pigment Defective Nomarski Phenotype   Allelism Evidence Reference Allele Database Release December, 2010 Seed Color   Embryo Color   Percent Mutant Seeds   Chi - Square   Seeds Counted   Percent Top Half   Chi - Square   Average Seed Length   Average Embryo Length