Aug 17, 2018 4:32 PM
Home
|
Access Page
|
Database Query
SeedGenes Profile: APG 6
Gene Information
Gene Symbol
APG 6
Chromosome Locus
At5g15450
Alleles in Database
3
See List
OR
Show All
Identity Confidence
Confirmed
Alias Symbol
Gene Class
Seed Pigment
Predicted Function
Chloroplast Hsp101 Homolog (ClpB3)
Function Details
Molecular chaperone; Stress response
Gene Evidence
Border Recovery
Myouga / Riken (2 alleles)
Border Recovery
Myouga / Salk (1 allele)
Database Release
December, 2010
Predicted Sequences
Gene:
4136 nucleotides
mRNA:
3186 nucleotides
Protein:
968 amino acids
cDNA Status
EST Identified
Top BLAST Hits
Arabidopsis
:
AT2G25140.1 (69%)
Plant ESTs:
Tomato (Lycopersicon esculentum) (83%)
Model Genomes:
Synechocystis (67%)
Subcellular Localization
TargetP
Targeted to Chloroplasts
SUBA
mRNA Expression Data
NASCArray Spot History for
246554_at
Mutant Information
Allele Symbol
apg 6-2
Mutant Class
Seed Pigment
Source of Mutant
Myouga / Riken
Mutant Line Number
RATM16-0684-1
Ecotype
Nossen
Genetic Background
ABRC Stock
Mutagen Treatment
Transposon
Insertion Mutant
Yes
Details
Flanking Sequence
Location of Mutation
Exon 2
Terminal Phenotype
Pigment Defective
Nomarski Phenotype
Allelism Evidence
Sequence Identity
Database Release
December, 2010
Seed Color
Embryo Color
Percent Mutant Seeds
Chi - Square
Seeds Counted
Percent Top Half
Chi - Square
Average Seed Length
Average Embryo Length