SeedGenes Profile: APG 6

Gene Information Gene Symbol APG 6 Chromosome Locus At5g15450   Alleles in Database 3   See List OR Show All Identity Confidence Confirmed Alias Symbol   Gene Class Seed Pigment Predicted Function Chloroplast Hsp101 Homolog (ClpB3) Function Details Molecular chaperone; Stress response Gene Evidence Border Recovery Myouga / Riken (2 alleles) Border Recovery Myouga / Salk (1 allele) Database Release December, 2010 Predicted Sequences Gene: 4136 nucleotides mRNA: 3186 nucleotides Protein:   968 amino acids cDNA Status EST Identified Top BLAST Hits Arabidopsis: AT2G25140.1 (69%) Plant ESTs: Tomato (Lycopersicon esculentum) (83%) Model Genomes:   Synechocystis (67%) Subcellular Localization TargetP Targeted to Chloroplasts SUBA mRNA Expression Data NASCArray Spot History for 246554_at

Mutant Information Allele Symbol apg 6-3 Mutant Class Seed Pigment Source of Mutant Myouga / Salk Mutant Line Number SALK_071039 Ecotype Columbia Genetic Background   ABRC Stock   Mutagen Treatment T-DNA Insertion Mutant Yes   Details Flanking Sequence   Location of Mutation Intron 4 Terminal Phenotype Pigment Defective Nomarski Phenotype   Allelism Evidence Sequence Identity Database Release December, 2010 Seed Color   Embryo Color   Percent Mutant Seeds   Chi - Square   Seeds Counted   Percent Top Half   Chi - Square   Average Seed Length   Average Embryo Length