OSU Syngenta vbi

SeedGenes Profile: AtASP 38

Gene Information
Gene Symbol AtASP 38
Chromosome Locus At5g02190   tair
Alleles in Database 2   See List OR Show All
Identity Confidence Confirmed
Alias Symbol PCS 1 (Y. Xia) Alternate Name
EMB 24 (D. Meinke) Complemetation Test
Gene Class Embryo Defective
Predicted Function Aspartic Protease
Function Details None
Gene Evidence
Molecular Complementation
Xia / SAIL (1 allele)
Border Recovery
Xia / SAIL (1 allele)
Database Release October, 2007
Predicted Sequences
Gene:1687 nucleotides
mRNA: 1687 nucleotides
Protein:  453 amino acids
cDNA Status FLcDNA Available: AK226937
Top BLAST Hits
Arabidopsis: AT2G39710.1 (63%)
Plant ESTs: Cotton (Gossypium) (70%)
Model Genomes:   None
Subcellular Localization TargetP Targeted to Chloroplasts
SUBA
mRNA Expression Data NASCArray Spot History for 251025_at
    
Mutant Information
Allele Symbol atasp 38emb 24
Mutant Class Embryo DefectiveEmbryo Defective
Source of Mutant Xia / SAILD. Meinke
Mutant Line Number SAIL_441_H06109F-1C
Ecotype ColumbiaColumbia
Genetic Background qrt 
ABRC Stock   
Mutagen Treatment T-DNAEMS
Insertion Mutant Yes   DetailsNo
Flanking Sequence   
Location of Mutation Exon 1 
Terminal Phenotype TransitionCotyledon
Nomarski Phenotype
Allelism Evidence Reference AlleleComplementation Test
Database Release October, 2007December, 2010
Seed Color   
Embryo Color   
Percent Mutant Seeds  25.8 %
Chi - Square   
Seeds Counted   
Percent Top Half  53.0 %
Chi - Square   
Average Seed Length   
Average Embryo Length